RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 NUMA1Q14980 2115 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 RAB19A4D1S5 217 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 LATS1O95835 1130 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 STATHP02808 62 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 S100A9P06702 114 aaKnown RBP13.78□□□□□ -0.2
CTNS-202ENST00000381870 CSF2RBP32927 897 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 MPIP34949 423 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 HABP2Q14520 560 aaPredicted RBP13.78□□□□□ -0.2
CTNS-202ENST00000381870 ATXN7L3Q14CW9 347 aaPredicted RBP13.78□□□□□ -0.2
CTNS-202ENST00000381870 TSC22D1Q15714 1073 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 LRRC37A5PQ49AS3 106 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 RAB12Q6IQ22 244 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 Q6ZVU0 165 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 SLC24A5Q71RS6 500 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 GLB1L2Q8IW92 636 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 ARL14EPQ8N8R7 260 aaPredicted RBP13.78□□□□□ -0.2
CTNS-202ENST00000381870 OR51L1Q8NGJ5 315 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 OR13C2Q8NGS9 318 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 MYLIPQ8WY64 445 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 ING5Q8WYH8 240 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 GLYATL1Q969I3 302 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 HAVCR1Q96D42 359 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 ZMYND19Q96E35 227 aaPredicted RBP13.78□□□□□ -0.2
CTNS-202ENST00000381870 TMEM231Q9H6L2 316 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 SYNPO2LQ9H987 977 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 KLHL28Q9NXS3 571 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 MIOXQ9UGB7 285 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 DPP7Q9UHL4 492 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 GNG8Q9UK08 70 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 A0A087WV48 116 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 LRIT2A6NDA9 550 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 MEIS3P1A6NDR6 274 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 ZNF879B4DU55 563 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 EOMESO95936 686 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 LAG3P18627 525 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 ITPKBP27987 946 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 OR1D2P34982 312 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 SLC11A1P49279 550 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 PDX1P52945 283 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 MRPS10P82664 201 aaKnown RBP13.78□□□□□ -0.2
CTNS-202ENST00000381870 FAM110CQ1W6H9 321 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 DEFB115Q30KQ5 88 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 YOD1Q5VVQ6 348 aaPredicted RBP13.78□□□□□ -0.2
CTNS-202ENST00000381870 BEST3Q8N1M1 668 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 PHOSPHO1Q8TCT1 267 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 TIFAQ96CG3 184 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 ZNF689Q96CS4 500 aaPredicted RBP13.78□□□□□ -0.2
CTNS-202ENST00000381870 PRSS27Q9BQR3 290 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 LRFN2Q9ULH4 789 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 DTX4Q9Y2E6 619 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 V9GY05 133 aa13.78□□□□□ -0.2
CTNS-202ENST00000381870 SCN10AQ9Y5Y9 1956 aa13.77□□□□□ -0.2
CTNS-202ENST00000381870 DENND4CQ5VZ89 1909 aa13.77□□□□□ -0.2
CTNS-202ENST00000381870 TRAV27A0A087WT01 109 aa13.77□□□□□ -0.21
CTNS-202ENST00000381870 ANKRD61A6NGH8 418 aa13.77□□□□□ -0.21
CTNS-202ENST00000381870 BCL2L11O43521 198 aa13.77□□□□□ -0.21
CTNS-202ENST00000381870 OR2T1O43869 369 aa13.77□□□□□ -0.21
CTNS-202ENST00000381870 ICOSLGO75144 302 aa13.77□□□□□ -0.21
CTNS-202ENST00000381870 NAA10P41227 235 aaPredicted RBP13.77□□□□□ -0.21
CTNS-202ENST00000381870 ZCCHC12Q6PEW1 402 aa13.77□□□□□ -0.21
CTNS-202ENST00000381870 UNQ9370/PRO34162Q6UXP9 181 aa13.77□□□□□ -0.21
CTNS-202ENST00000381870 LILRB2Q8N423 598 aa13.77□□□□□ -0.21
CTNS-202ENST00000381870 FBXO17Q96EF6 278 aa13.77□□□□□ -0.21
CTNS-202ENST00000381870 ARSGQ96EG1 525 aa13.77□□□□□ -0.21
CTNS-202ENST00000381870 APMAPQ9HDC9 416 aa13.77□□□□□ -0.21
CTNS-202ENST00000381870 TAC3Q9UHF0 121 aa13.77□□□□□ -0.21
CTNS-202ENST00000381870 KLF15Q9UIH9 416 aa13.77□□□□□ -0.21
CTNS-202ENST00000381870 MTCL1Q9Y4B5 1905 aaKnown RBP13.77□□□□□ -0.21
CTNS-202ENST00000381870 IDSB3KWA1 339 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 NDUFS4O43181 175 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 RBBP9O75884 186 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 PNLIPRP2P54317 469 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 ACTC1P68032 377 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 ACTA1P68133 377 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 GUCA2AQ02747 115 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 PLEKHN1Q494U1 663 aaPredicted RBP13.76□□□□□ -0.21
CTNS-202ENST00000381870 ZNF658BQ4V348 819 aaPredicted RBP13.76□□□□□ -0.21
CTNS-202ENST00000381870 C10orf91Q5T1B1 145 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 TXNDC8Q6A555 127 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 MRM1Q6IN84 353 aaKnown RBP13.76□□□□□ -0.21
CTNS-202ENST00000381870 FAM122BQ7Z309 247 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 SDR9C7Q8NEX9 313 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 OR6N1Q8NGY5 312 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 C2orf15Q8WU43 125 aaKnown RBP13.76□□□□□ -0.21
CTNS-202ENST00000381870 RHBGQ9H310 441 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 EXO5Q9H790 373 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 CLDND1Q9NY35 253 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 ZNF223Q9UK11 482 aaPredicted RBP13.76□□□□□ -0.21
CTNS-202ENST00000381870 OR14I1A6ND48 311 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 OR5H14A6NHG9 310 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 RIIAD1A6NNX1 92 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 CTNSO60931 367 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 PPP1R3DO95685 299 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 POP4O95707 220 aaKnown RBP13.76□□□□□ -0.21
CTNS-202ENST00000381870 RAB40ALP0C0E4 278 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 PTAFRP25105 342 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 PSMB5P28074 263 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 NTSP30990 170 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 FAUP35544 74 aaKnown RBP13.76□□□□□ -0.21
CTNS-202ENST00000381870 ANXA11P50995 505 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms