RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 GRIP1Q9Y3R0 1128 aa3.42□□□□□ -1.86
SMC6-202ENST00000381272 CSNK1G3Q9Y6M4 447 aa3.42□□□□□ -1.86
SMC6-202ENST00000381272 STON1Q9Y6Q2 735 aa3.42□□□□□ -1.86
SMC6-202ENST00000381272 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 NPIPA5A0A0B4J1W7 369 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 A0A0B4J293 547 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.41□□□□□ -1.86
SMC6-202ENST00000381272 TMEM129A0AVI4 362 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 LINC01553A4QN01 128 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 CCDC182A6NF36 153 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 WIPF3A6NGB9 483 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 HMX3A6NHT5 357 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 TTC36A6NLP5 189 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 CENPXA8MT69 81 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 KDM4EB2RXH2 506 aaPredicted RBP3.41□□□□□ -1.86
SMC6-202ENST00000381272 NPIPA7E9PJI5 369 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 BTN3A3O00478 584 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 GABRPO00591 440 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 POLR1CO15160 346 aaPredicted RBP3.41□□□□□ -1.86
SMC6-202ENST00000381272 CASC3O15234 703 aaKnown RBP3.41□□□□□ -1.86
SMC6-202ENST00000381272 SURF4O15260 269 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 KAT7O95251 611 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 EML2O95834 649 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 GKN3PP0CG01 181 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 NPIPA8P0DM63 369 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 PRG2P13727 222 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 CELP19835 753 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 MYL9P24844 172 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 GABRA5P31644 462 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 MPIP34949 423 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 ATP6V1E1P36543 226 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 IFNGR2P38484 337 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 CDH11P55287 796 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 MRPS15P82914 257 aaKnown RBP3.41□□□□□ -1.86
SMC6-202ENST00000381272 ID2Q02363 134 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 ST3GAL3Q11203 375 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 RAB40BQ12829 278 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 ZNF155Q12901 538 aaPredicted RBP3.41□□□□□ -1.86
SMC6-202ENST00000381272 SGCGQ13326 291 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 ASAH1Q13510 395 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 RUNX3Q13761 415 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 GNA13Q14344 377 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 PDGFRLQ15198 375 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 TOMM20Q15388 145 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 RPE65Q16518 533 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 ZFP69Q49AA0 526 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 ZNF628Q5EBL2 1059 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 CCNJQ5T5M9 372 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 DDI2Q5TDH0 399 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 AADACL4Q5VUY2 407 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 CNIH2Q6PI25 160 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 BHLHB9Q6PI77 547 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 PAMR1Q6UXH9 720 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 TMEM64Q6YI46 380 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 HSDL2Q6YN16 418 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 MTSS1LQ765P7 747 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 RTL10Q7L3V2 364 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 KLBQ86Z14 1044 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 CPOQ8IVL8 374 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 NRMQ8IXM6 262 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 CLDN22Q8N7P3 220 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 DNAJC5GQ8N7S2 189 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 MFSD9Q8NBP5 474 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 ZNF485Q8NCK3 441 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 TTLQ8NG68 377 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 OR2L5Q8NG80 312 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 OR7G2Q8NG99 324 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 ZCCHC10Q8TBK6 192 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 SMAP2Q8WU79 429 aaPredicted RBP3.41□□□□□ -1.86
SMC6-202ENST00000381272 DPF1Q92782 380 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 SMARCD2Q92925 531 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 GIMAP5Q96F15 307 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 SLC41A3Q96GZ6 507 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 SENP5Q96HI0 755 aaPredicted RBP3.41□□□□□ -1.86
SMC6-202ENST00000381272 ZNF681Q96N22 645 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 SLC38A2Q96QD8 506 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 FYTTD1Q96QD9 318 aaKnown RBP3.41□□□□□ -1.86
SMC6-202ENST00000381272 ATF6BQ99941 703 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 MED18Q9BUE0 208 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 OR2B2Q9GZK3 357 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 BTBD1Q9H0C5 482 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 ISG20L2Q9H9L3 353 aaKnown RBP3.41□□□□□ -1.86
SMC6-202ENST00000381272 RANGRFQ9HD47 186 aaPredicted RBP3.41□□□□□ -1.86
SMC6-202ENST00000381272 PHPT1Q9NRX4 125 aaPredicted RBP3.41□□□□□ -1.86
SMC6-202ENST00000381272 GIMAP4Q9NUV9 329 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 NPAP1Q9NZP6 1156 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 ITGB1BP2Q9UKP3 347 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 SLC7A7Q9UM01 511 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 LIPT1Q9Y234 373 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 CA5BQ9Y2D0 317 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 GSTK1Q9Y2Q3 226 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 EXOSC1Q9Y3B2 195 aaKnown RBP3.41□□□□□ -1.86
SMC6-202ENST00000381272 ZNF780BQ9Y6R6 833 aa3.41□□□□□ -1.86
SMC6-202ENST00000381272 TBC1D3DA0A087WVF3 549 aa3.4□□□□□ -1.86
SMC6-202ENST00000381272 TBC1D3IA0A087WXS9 549 aa3.4□□□□□ -1.86
SMC6-202ENST00000381272 TBC1D3EA0A087X179 549 aa3.4□□□□□ -1.86
SMC6-202ENST00000381272 TBC1D3KA0A087X1G2 549 aa3.4□□□□□ -1.86
SMC6-202ENST00000381272 A0A1B0GVC2 190 aa3.4□□□□□ -1.86
SMC6-202ENST00000381272 TRDV1A0A1B0GX56 115 aa3.4□□□□□ -1.86
SMC6-202ENST00000381272 IRGMA1A4Y4 181 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms