RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 PRODH2Q9UF12 536 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 PPT2Q9UMR5 302 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 RASD1Q9Y272 281 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 MYO10Q9HD67 2058 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 A0A087WZY1 265 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 RAB36O95755 333 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 SEMG1P04279 462 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 RBM34P42696 430 aaKnown RBP8.66□□□□□ -1.02
PTPRA-204ENST00000380393 TTPAP49638 278 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 CRISP1P54107 249 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 RPL38P63173 70 aaKnown RBP8.66□□□□□ -1.02
PTPRA-204ENST00000380393 NKX6-1P78426 367 aaPredicted RBP8.66□□□□□ -1.02
PTPRA-204ENST00000380393 SHC2P98077 582 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 KHDRBS2Q5VWX1 349 aaKnown RBP8.66□□□□□ -1.02
PTPRA-204ENST00000380393 IL27RAQ6UWB1 636 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 CXCL17Q6UXB2 119 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 TMEM108Q6UXF1 575 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 HIST2H3AQ71DI3 136 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 PRSS45Q7RTY3 260 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 BAP18Q8IXM2 172 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 FAM26EQ8N5C1 309 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 FAM160A2Q8N612 972 aaPredicted RBP8.66□□□□□ -1.02
PTPRA-204ENST00000380393 OR51Q1Q8NH59 317 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 MRGPRDQ8TDS7 321 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 TNFAIP8L1Q8WVP5 186 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 RGMAQ96B86 450 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 FAM210BQ96KR6 192 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 TEX101Q9BY14 249 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 ULBP1Q9BZM6 244 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 HRH4Q9H3N8 390 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 AUNIPQ9H7T9 357 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 TMEM27Q9HBJ8 222 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 GOLGA2P5Q9HBQ8 144 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 GSKIPQ9P0R6 139 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 A4GNTQ9UNA3 340 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 ST3GAL5Q9UNP4 418 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 GGT3PA6NGU5 568 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 FAM183AA6NL82 134 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 SNRPGP15A8MWD9 76 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 RNASEK-C17orf49H0YIS7 233 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 H0YIV9 168 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 GLCEO94923 617 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 C8GP07360 202 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 NME2P22392 152 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 AGTR1P30556 359 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 AFF3P51826 1226 aaKnown RBP8.66□□□□□ -1.02
PTPRA-204ENST00000380393 KIAA0040Q15053 153 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 PKDCCQ504Y2 493 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 HBMQ6B0K9 141 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 TSSK4Q6SA08 328 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 CBLL1Q75N03 491 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 SLC30A8Q8IWU4 369 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 ETFBKMTQ8IXQ9 262 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 MMP21Q8N119 569 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 SP7Q8TDD2 431 aaPredicted RBP8.66□□□□□ -1.02
PTPRA-204ENST00000380393 RELTQ969Z4 430 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 RRNAD1Q96FB5 475 aaKnown RBP8.66□□□□□ -1.02
PTPRA-204ENST00000380393 ELOVL1Q9BW60 279 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 FZD8Q9H461 694 aa8.66□□□□□ -1.02
PTPRA-204ENST00000380393 TBC1D3DA0A087WVF3 549 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 TBC1D3IA0A087WXS9 549 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 TBC1D3EA0A087X179 549 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 ZAR1LA6NP61 321 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 TBC1D3LB9A6J9 549 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 GGCTO75223 188 aaKnown RBP8.65□□□□□ -1.02
PTPRA-204ENST00000380393 ITGA10O75578 1167 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 ZFPL1O95159 310 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 ZNF16P17020 682 aaPredicted RBP8.65□□□□□ -1.02
PTPRA-204ENST00000380393 MPZP25189 248 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 PITPNAQ00169 270 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 ATXN7L3Q14CW9 347 aaPredicted RBP8.65□□□□□ -1.02
PTPRA-204ENST00000380393 RFTN2Q52LD8 501 aaPredicted RBP8.65□□□□□ -1.02
PTPRA-204ENST00000380393 TBC1D3CQ6IPX1 549 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 IL34Q6ZMJ4 242 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 TBC1D3Q8IZP1 549 aaPredicted RBP8.65□□□□□ -1.02
PTPRA-204ENST00000380393 POGLUT1Q8NBL1 392 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 HSPA12BQ96MM6 686 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 SLC6A18Q96N87 628 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 CNN2Q99439 309 aaKnown RBP8.65□□□□□ -1.02
PTPRA-204ENST00000380393 FAAP24Q9BTP7 215 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 ASB8Q9H765 288 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 HRASLSQ9HDD0 168 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 GTF2A1LQ9UNN4 478 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 MAP4K5Q9Y4K4 846 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 ELOA3CA0A087WX78 387 aaPredicted RBP8.65□□□□□ -1.02
PTPRA-204ENST00000380393 TEX13DA0A0J9YY54 714 aaPredicted RBP8.65□□□□□ -1.02
PTPRA-204ENST00000380393 A0A1W2PPE2 198 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 OR52A4PA6NMU1 304 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 YJEFN3A6XGL0 299 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 H7C4K7 107 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 OGG1O15527 345 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 CDC14BO60729 498 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 RDH16O75452 317 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 UBL3O95164 117 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 CELP19835 753 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 MMP15P51511 669 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 IDH3GP51553 393 aaPredicted RBP8.65□□□□□ -1.02
PTPRA-204ENST00000380393 WNT3AP56704 352 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 IRF8Q02556 426 aa8.65□□□□□ -1.02
PTPRA-204ENST00000380393 MRPL49Q13405 166 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms