RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 GRINAQ7Z429 371 aa18.02■□□□□ 0.48
PDLIM5-205ENST00000380180 MCFD2Q8NI22 146 aa18.02■□□□□ 0.48
PDLIM5-205ENST00000380180 TMEM203Q969S6 136 aa18.02■□□□□ 0.48
PDLIM5-205ENST00000380180 RASD2Q96D21 266 aa18.02■□□□□ 0.48
PDLIM5-205ENST00000380180 DDOQ99489 341 aa18.02■□□□□ 0.48
PDLIM5-205ENST00000380180 ADGRL4Q9HBW9 690 aa18.02■□□□□ 0.48
PDLIM5-205ENST00000380180 ZNF229Q9UJW7 825 aa18.02■□□□□ 0.48
PDLIM5-205ENST00000380180 TMED7Q9Y3B3 224 aa18.02■□□□□ 0.48
PDLIM5-205ENST00000380180 TRAV36DV7A0A075B6V5 113 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 SUSD5O60279 629 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 HIST1H2ABP04908 130 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 CELA2AP08217 269 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 SBK2P0C263 348 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 TMED10P49755 219 aaKnown RBP18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 CTXN1P60606 82 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 ZNF322Q6U7Q0 402 aaPredicted RBP18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 HIST3H2AQ7L7L0 130 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 GHDCQ8N2G8 530 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 ZFP41Q8N8Y5 198 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 OR10H4Q8NGA5 316 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 OR6Q1Q8NGQ2 317 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 SLC22A8Q8TCC7 542 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 RNF138Q8WVD3 245 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 UFD1Q92890 307 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 HIST1H2ACQ93077 130 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 IMMP1LQ96LU5 166 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 Q96M85 177 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 TIMP4Q99727 224 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 ZNF700Q9H0M5 742 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 ISG20L2Q9H9L3 353 aaKnown RBP18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 FKRPQ9H9S5 495 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 MED11Q9P086 117 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 SSR3Q9UNL2 185 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 CAB39Q9Y376 341 aaPredicted RBP18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 SF3B6Q9Y3B4 125 aaKnown RBP18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 CORINQ9Y5Q5 1042 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 HS3ST3B1Q9Y662 390 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 KNTC1P50748 2209 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 PCNX2A6NKB5 2137 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 DAPL1A0PJW8 107 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 TMEM72A0PK05 275 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 PMS2P1A4D2B8 440 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 OR6C68A6NDL8 312 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 ANKUB1A6NFN9 424 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 IMPA2O14732 288 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 PLD2O14939 933 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 LRRTM2O43300 516 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 CBFA2T3O75081 653 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 STK17BO94768 372 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 BGLAPP02818 100 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 F13BP05160 661 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 CD14P08571 375 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 COX6A1P12074 109 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 INSM1Q01101 510 aaPredicted RBP18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 RPL18Q07020 188 aaKnown RBP18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 ZNF404Q494X3 552 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 ANKDD1AQ495B1 522 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 RAB11FIP2Q7L804 512 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 NANOGNBQ7Z5D8 188 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 OR10G3Q8NGC4 313 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 OR51L1Q8NGJ5 315 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 SMAP2Q8WU79 429 aaPredicted RBP18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 BORCS5Q969J3 196 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 DACH2Q96NX9 599 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 RASL10BQ96S79 203 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 ALG8Q9BVK2 526 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 STRADBQ9C0K7 418 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 KLRF1Q9NZS2 232 aa18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 YARS2Q9Y2Z4 477 aaKnown RBP18.01■□□□□ 0.47
PDLIM5-205ENST00000380180 METTL15A6NJ78 407 aa18■□□□□ 0.47
PDLIM5-205ENST00000380180 FBXO45P0C2W1 286 aa18■□□□□ 0.47
PDLIM5-205ENST00000380180 ZNF806P0C7X5 589 aa18■□□□□ 0.47
PDLIM5-205ENST00000380180 RAB15P59190 212 aa18■□□□□ 0.47
PDLIM5-205ENST00000380180 ACSM1Q08AH1 577 aa18■□□□□ 0.47
PDLIM5-205ENST00000380180 GALEQ14376 348 aa18■□□□□ 0.47
PDLIM5-205ENST00000380180 TMPRSS11AQ6ZMR5 421 aa18■□□□□ 0.47
PDLIM5-205ENST00000380180 FAM122BQ7Z309 247 aa18■□□□□ 0.47
PDLIM5-205ENST00000380180 ZPLD1Q8TCW7 415 aa18■□□□□ 0.47
PDLIM5-205ENST00000380180 TMEM234Q8WY98 164 aa18■□□□□ 0.47
PDLIM5-205ENST00000380180 SMPDL3BQ92485 455 aa18■□□□□ 0.47
PDLIM5-205ENST00000380180 CDADC1Q9BWV3 514 aa18■□□□□ 0.47
PDLIM5-205ENST00000380180 ASPNQ9BXN1 380 aa18■□□□□ 0.47
PDLIM5-205ENST00000380180 OCEL1Q9H607 264 aa18■□□□□ 0.47
PDLIM5-205ENST00000380180 TEX13CA0A0J9YWL9 993 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 A0A1B0GVG6 124 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 A8MVM7 634 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 J3QRK9 145 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 NPIPB7O75200 414 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 FOLR3P41439 243 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 RPS25P62851 125 aaKnown RBP17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 SLC25A36Q96CQ1 311 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 ZMYND19Q96E35 227 aaPredicted RBP17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 NPAS1Q99742 590 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 PTDSS2Q9BVG9 487 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 MMP27Q9H306 513 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 RERGLQ9H628 205 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 ASB6Q9NWX5 421 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 TOR4AQ9NXH8 423 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 CCDC59Q9P031 241 aaKnown RBP17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 PADI1Q9ULC6 663 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms