RNA–Protein interactions for RNA: ENST00000379600.7

NHLRC3-202, Transcript of NHL repeat containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC3, Length 3,549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-202ENST00000379600 OTUB2Q96DC9 234 aa8.6□□□□□ -1.03
NHLRC3-202ENST00000379600 ZNF559Q9BR84 538 aa8.6□□□□□ -1.03
NHLRC3-202ENST00000379600 ZNF426Q9BUY5 554 aa8.6□□□□□ -1.03
NHLRC3-202ENST00000379600 PRSS16Q9NQE7 514 aa8.6□□□□□ -1.03
NHLRC3-202ENST00000379600 CXXC1Q9P0U4 656 aaPredicted RBP8.6□□□□□ -1.03
NHLRC3-202ENST00000379600 KLHL9Q9P2J3 617 aa8.6□□□□□ -1.03
NHLRC3-202ENST00000379600 SERTAD3Q9UJW9 196 aa8.6□□□□□ -1.03
NHLRC3-202ENST00000379600 ACSL5Q9ULC5 683 aa8.6□□□□□ -1.03
NHLRC3-202ENST00000379600 MED31Q9Y3C7 131 aa8.6□□□□□ -1.03
NHLRC3-202ENST00000379600 CHD9Q3L8U1 2897 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 A0A0B4J2E0 115 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 A0A1B0GX12 115 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 C4orf47A7E2U8 309 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 PSMD9O00233 223 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 KRT33AO76009 404 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 NDUFB6O95139 128 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 TSFMP43897 325 aaKnown RBP8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 PSMA6P60900 246 aaKnown RBP8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 TNFRSF17Q02223 184 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 OC90Q02509 493 aaPredicted RBP8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 FIGNL1Q6PIW4 674 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 DNM1P46Q6ZS02 220 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 SLC36A1Q7Z2H8 476 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 SLC35F2Q8IXU6 374 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 WFIKKN2Q8TEU8 576 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 PTCHD1Q96NR3 888 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 NCDNQ9UBB6 729 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 GPR160Q9UJ42 338 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 COL4A2P08572 1712 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 GXYLT2A0PJZ3 443 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 PYCARD-AS1I3L0S3 204 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 SIGLEC5O15389 551 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 P2RX6O15547 441 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 HIST1H2ABP04908 130 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 CD1AP06126 327 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 DBIP07108 87 aaKnown RBP8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 OR2T7P0C7T2 308 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 ADRA2CP18825 462 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 CDK2P24941 298 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 EDNRAP25101 427 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 UBE2MP61081 183 aaKnown RBP8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 SIGLEC14Q08ET2 396 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 DCAF12L2Q5VW00 463 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 RPL22L1Q6P5R6 122 aaKnown RBP8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 HIST3H2AQ7L7L0 130 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 OR2T27Q8NH04 317 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 HIST1H2ACQ93077 130 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 GPR174Q9BXC1 333 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 TSPAN10Q9H1Z9 355 aaPredicted RBP8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 OPN4Q9UHM6 478 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 FBXL2Q9UKC9 423 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 ADAM18Q9Y3Q7 739 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 NAP1L6A6NFF2 107 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 MCIDASD6RGH6 385 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 FMO6PO60774 539 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 STX11O75558 287 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 ZFPL1O95159 310 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 ECDO95905 644 aaPredicted RBP8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 FCER2P06734 321 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 GABRA1P14867 456 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 CSRP1P21291 193 aaKnown RBP8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 VIPR2P41587 438 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 RAP2BP61225 183 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 SEC61A1P61619 476 aaKnown RBP8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 IRF4Q15306 451 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 TMUB2Q71RG4 321 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 TMEFF1Q8IYR6 380 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 TMEM52Q8NDY8 209 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 BVESQ8NE79 360 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 OR4D10Q8NGI6 311 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 SYNPRQ8TBG9 265 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 FCAMRQ8WWV6 532 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 PNPLA2Q96AD5 504 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 CNN2Q99439 309 aaKnown RBP8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 HDAC8Q9BY41 377 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 SERGEFQ9UGK8 458 aa8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 ZNF346Q9UL40 294 aaKnown RBP8.59□□□□□ -1.03
NHLRC3-202ENST00000379600 TMEM272A0A1B0GTI8 110 aa8.58□□□□□ -1.04
NHLRC3-202ENST00000379600 ARPC5O15511 151 aa8.58□□□□□ -1.04
NHLRC3-202ENST00000379600 KHDRBS3O75525 346 aaKnown RBP8.58□□□□□ -1.04
NHLRC3-202ENST00000379600 AGR2O95994 175 aa8.58□□□□□ -1.04
NHLRC3-202ENST00000379600 LAMP2P13473 410 aa8.58□□□□□ -1.04
NHLRC3-202ENST00000379600 ITGB8P26012 769 aa8.58□□□□□ -1.04
NHLRC3-202ENST00000379600 MAP3K8P41279 467 aa8.58□□□□□ -1.04
NHLRC3-202ENST00000379600 EMDP50402 254 aa8.58□□□□□ -1.04
NHLRC3-202ENST00000379600 MAT1AQ00266 395 aaKnown RBP8.58□□□□□ -1.04
NHLRC3-202ENST00000379600 POU4F2Q12837 409 aa8.58□□□□□ -1.04
NHLRC3-202ENST00000379600 ZNF684Q5T5D7 378 aa8.58□□□□□ -1.04
NHLRC3-202ENST00000379600 LRFN4Q6PJG9 635 aa8.58□□□□□ -1.04
NHLRC3-202ENST00000379600 GRASPQ7Z6J2 395 aaPredicted RBP8.58□□□□□ -1.04
NHLRC3-202ENST00000379600 BIVMQ86UB2 503 aa8.58□□□□□ -1.04
NHLRC3-202ENST00000379600 PAQR7Q86WK9 346 aa8.58□□□□□ -1.04
NHLRC3-202ENST00000379600 OR14A16Q8NHC5 309 aa8.58□□□□□ -1.04
NHLRC3-202ENST00000379600 STK35Q8TDR2 534 aa8.58□□□□□ -1.04
NHLRC3-202ENST00000379600 MARC2Q969Z3 335 aa8.58□□□□□ -1.04
NHLRC3-202ENST00000379600 ADAP2Q9NPF8 381 aa8.58□□□□□ -1.04
NHLRC3-202ENST00000379600 C19orf53Q9UNZ5 99 aaPredicted RBP8.58□□□□□ -1.04
NHLRC3-202ENST00000379600 A0A1B0GTQ1 180 aa8.58□□□□□ -1.04
NHLRC3-202ENST00000379600 A0A1B0GWA3 101 aa8.58□□□□□ -1.04
NHLRC3-202ENST00000379600 ZNF879B4DU55 563 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms