RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 MC2RQ01718 297 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 Q499Y3 187 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 SYT14P1Q58G82 188 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 KRBOX4Q5JUW0 171 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 ZC3H14Q6PJT7 736 aaKnown RBP7.79□□□□□ -1.16
VPS36-201ENST00000378060 IL20RBQ6UXL0 311 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 TMEM184AQ6ZMB5 413 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 GDPD3Q7L5L3 318 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 GPR155Q7Z3F1 870 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 SPTSSAQ969W0 71 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 RRNAD1Q96FB5 475 aaKnown RBP7.79□□□□□ -1.16
VPS36-201ENST00000378060 NECTIN4Q96NY8 510 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 INSM2Q96T92 566 aaPredicted RBP7.79□□□□□ -1.16
VPS36-201ENST00000378060 UBQLN3Q9H347 655 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 PARPBPQ9NWS1 579 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 HCFC1R1Q9NWW0 138 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 CACNA1CQ13936 2221 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 A0A0A6YYC8 382 aaPredicted RBP7.79□□□□□ -1.16
VPS36-201ENST00000378060 ARRDC5A6NEK1 342 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 I3L1I5 382 aaPredicted RBP7.79□□□□□ -1.16
VPS36-201ENST00000378060 CRTAPO75718 401 aaPredicted RBP7.79□□□□□ -1.16
VPS36-201ENST00000378060 ATP1B1P05026 303 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 SERPINA5P05154 406 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 CA3P07451 260 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 HBQ1P09105 142 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 CHRNB1P11230 501 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 F3P13726 295 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 PRKACAP17612 351 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 CD53P19397 219 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 P2RY2P41231 377 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 MCCD1P59942 119 aaPredicted RBP7.79□□□□□ -1.16
VPS36-201ENST00000378060 AKR1C8PQ5T2L2 129 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 CARD17Q5XLA6 110 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 ADAMTSL4Q6UY14 1074 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 RFLNAQ6ZTI6 216 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 MCATQ8IVS2 390 aaKnown RBP7.79□□□□□ -1.16
VPS36-201ENST00000378060 GPR137CQ8N3F9 429 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 OR51T1Q8NGJ9 327 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 C16orf58Q96GQ5 468 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 MACROD1Q9BQ69 325 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 SULT4A1Q9BR01 284 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 OCEL1Q9H607 264 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 PDFQ9HBH1 243 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 AKIP1Q9NQ31 210 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 CLEC2DQ9UHP7 191 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 SLC6A14Q9UN76 642 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 YBX2Q9Y2T7 364 aaKnown RBP7.79□□□□□ -1.16
VPS36-201ENST00000378060 TMEM82A0PJX8 343 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 PRAMEF26H0Y7S4 382 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 SLC16A7O60669 478 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 NCR1O76036 304 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 LALBAP00709 142 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 KNG1P01042 644 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 CLEC2LP0C7M8 214 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 FOXK2Q01167 660 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 CRMP1Q14194 572 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 EXOSC7Q15024 291 aaKnown RBP7.79□□□□□ -1.16
VPS36-201ENST00000378060 RPE65Q16518 533 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 DUSP7Q16829 419 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 DEFB110Q30KQ9 67 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 ACTBL2Q562R1 376 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 FAHD1Q6P587 224 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 C5orf46Q6UWT4 87 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 ZNF595Q8IYB9 648 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 MRPL43Q8N983 215 aaKnown RBP7.79□□□□□ -1.16
VPS36-201ENST00000378060 THAP3Q8WTV1 239 aaPredicted RBP7.79□□□□□ -1.16
VPS36-201ENST00000378060 YIPF6Q96EC8 236 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 DNAJA3Q96EY1 480 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 SORCS2Q96PQ0 1159 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 ZNF649Q9BS31 505 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 TNFRSF12AQ9NP84 129 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 MAN2C1Q9NTJ4 1040 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 QPCTLQ9NXS2 382 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 SLC5A10A0PJK1 596 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 TRABD2BA6NFA1 517 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 IGLV3-27P01718 113 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 HLA-AP01891 365 aaKnown RBP7.79□□□□□ -1.16
VPS36-201ENST00000378060 LINC00271P0C7V0 271 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 HOXB9P17482 250 aaPredicted RBP7.79□□□□□ -1.16
VPS36-201ENST00000378060 PKLRP30613 574 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 RPL35P42766 123 aaKnown RBP7.79□□□□□ -1.16
VPS36-201ENST00000378060 GPLD1P80108 840 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 GAB1Q13480 694 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 PEA15Q15121 130 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 SF3B4Q15427 424 aaKnown RBP eCLIP7.79□□□□□ -1.169e-7■■■■■ 50.3
VPS36-201ENST00000378060 HSF5Q4G112 596 aaPredicted RBP7.79□□□□□ -1.16
VPS36-201ENST00000378060 SLC48A1Q6P1K1 146 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 UNQ6126/PRO20091Q6UXV3 157 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 RSPO2Q6UXX9 243 aaPredicted RBP7.79□□□□□ -1.16
VPS36-201ENST00000378060 BEND4Q6ZU67 534 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 SLC51BQ86UW2 128 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 LGALS14Q8TCE9 139 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 DIO2Q92813 273 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 ALG12Q9BV10 488 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 ELOVL3Q9HB03 270 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 RARRES3Q9UL19 164 aa7.79□□□□□ -1.16
VPS36-201ENST00000378060 GJE1A6NN92 205 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 SGK494L7N484 410 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 ZNF217O75362 1048 aa7.78□□□□□ -1.16
VPS36-201ENST00000378060 ABLIM3O94929 683 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms