RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 DNLZQ5SXM8 178 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 SSC5DA1L4H1 1573 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 FABP1P07148 127 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 OR14C36Q8NHC7 312 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 C3orf49Q96BT1 292 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 CASP3P42574 277 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 ZNF283Q8N7M2 679 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 OR13D1Q8NGV5 346 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 SPSB1Q96BD6 273 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 C1orf198Q9H425 327 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 NSG2Q9Y328 171 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 C5orf51A6NDU8 294 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 ABCG1P45844 678 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 SHARPINQ9H0F6 387 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 TEX13DA0A0J9YY54 714 aaPredicted RBP4.58□□□□□ -1.68
PCDH9-201ENST00000377861 SERPINE2P07093 398 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 CD83Q01151 205 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 KTI12Q96EK9 354 aaPredicted RBP4.58□□□□□ -1.68
PCDH9-201ENST00000377861 GPER1Q99527 375 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 F6UZH7 168 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 NT5EP21589 574 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 MAVSQ7Z434 540 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 SEH1LQ96EE3 360 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 PPP1R3EQ9H7J1 279 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 USP54Q70EL1 1684 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 SRCP12931 536 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 ZNF528Q3MIS6 628 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 PATZ1Q9HBE1 687 aaKnown RBP4.58□□□□□ -1.68
PCDH9-201ENST00000377861 POLR2HP52434 150 aaKnown RBP4.58□□□□□ -1.68
PCDH9-201ENST00000377861 BAXQ07812 192 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 TXNDC12O95881 172 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 OR12D1P0DN82 309 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 SLC2A1P11166 492 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 Q8IYB0 196 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 VN1R2Q8NFZ6 395 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 MSI2Q96DH6 328 aaKnown RBP4.58□□□□□ -1.68
PCDH9-201ENST00000377861 CD22P20273 847 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 AQP1P29972 269 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 PGDP52209 483 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 SLC39A11Q8N1S5 342 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 OR5B12Q96R08 314 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 ALG12Q9BV10 488 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 TMED9Q9BVK6 235 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 AMBNQ9NP70 447 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 SPANXA1Q9NS26 97 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 ABCD4O14678 606 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 AIFM1O95831 613 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 OR8G1Q15617 311 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 CHRDL2Q6WN34 429 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 LRRC69Q6ZNQ3 347 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 LIN7BQ9HAP6 207 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.58□□□□□ -1.68
PCDH9-201ENST00000377861 LRATO95237 230 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 MPZP25189 248 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 GDF5P43026 501 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 MFSD12Q6NUT3 480 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 GAPDHP04406 335 aaKnown RBP4.58□□□□□ -1.68
PCDH9-201ENST00000377861 SBK3P0C264 359 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 STK11Q15831 433 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 MFSD4AQ8N468 514 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 OR51A2Q8NGJ7 313 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 ANHXE9PGG2 379 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 ZNF264O43296 627 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 TPST2O60704 377 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 CFPP27918 469 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 FIGLAQ6QHK4 219 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 SULF2Q8IWU5 870 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 OR52I1Q8NGK6 324 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 RAB33BQ9H082 229 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 ZNF69Q9UC07 566 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 ZDHHC8Q9ULC8 765 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 EEF1E1O43324 174 aaKnown RBP4.58□□□□□ -1.68
PCDH9-201ENST00000377861 PBX2P40425 430 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 CASRP41180 1078 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 FANK1Q8TC84 345 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 MRGPRX4Q96LA9 322 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 LHX3Q9UBR4 397 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 RASD1Q9Y272 281 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 PQBP1O60828 265 aaKnown RBP4.58□□□□□ -1.68
PCDH9-201ENST00000377861 SSTP61278 116 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 PIM3Q86V86 326 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 FAM181AQ8N9Y4 354 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 ARPC5LQ9BPX5 153 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 CNIH4Q9P003 139 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 H2BFMP0C1H6 154 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 HTR2BP41595 481 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 TANGO2Q6ICL3 276 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 TMUB2Q71RG4 321 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 GJC3Q8NFK1 279 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 PPIL3Q9H2H8 161 aaKnown RBP4.58□□□□□ -1.68
PCDH9-201ENST00000377861 C19orf12Q9NSK7 152 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 FBLN5Q9UBX5 448 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 PTAFRP25105 342 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 PCBP4P57723 403 aaKnown RBP4.58□□□□□ -1.68
PCDH9-201ENST00000377861 GRINAQ7Z429 371 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 SYT9Q86SS6 491 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 TUBB1Q9H4B7 451 aa4.58□□□□□ -1.68
PCDH9-201ENST00000377861 CUEDC1Q9NWM3 386 aaPredicted RBP4.58□□□□□ -1.68
PCDH9-201ENST00000377861 SERINC4A6NH21 518 aa4.57□□□□□ -1.68
PCDH9-201ENST00000377861 CSN2P05814 226 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms