RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 TMIGD3P0DMS9 266 aaPredicted RBP15.18■□□□□ 0.02
TRIM39-201ENST00000376656 MECP2P51608 486 aaKnown RBP15.18■□□□□ 0.02
TRIM39-201ENST00000376656 ACTA2P62736 377 aa15.18■□□□□ 0.02
TRIM39-201ENST00000376656 ACTG2P63267 376 aa15.18■□□□□ 0.02
TRIM39-201ENST00000376656 UBXN2BQ14CS0 331 aa15.18■□□□□ 0.02
TRIM39-201ENST00000376656 STK11Q15831 433 aa15.18■□□□□ 0.02
TRIM39-201ENST00000376656 SHEQ5VZ18 495 aa15.18■□□□□ 0.02
TRIM39-201ENST00000376656 ERN2Q76MJ5 926 aaKnown RBP15.18■□□□□ 0.02
TRIM39-201ENST00000376656 DNAAF1Q8NEP3 725 aa15.18■□□□□ 0.02
TRIM39-201ENST00000376656 NXPE3Q969Y0 559 aa15.18■□□□□ 0.02
TRIM39-201ENST00000376656 C10orf90Q96M02 699 aa15.18■□□□□ 0.02
TRIM39-201ENST00000376656 CNN2Q99439 309 aaKnown RBP15.18■□□□□ 0.02
TRIM39-201ENST00000376656 SLC38A3Q99624 504 aa15.18■□□□□ 0.02
TRIM39-201ENST00000376656 CXXC1Q9P0U4 656 aaPredicted RBP15.18■□□□□ 0.02
TRIM39-201ENST00000376656 FAM74A7A6NL05 159 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 GOSR2O14653 212 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 MOSPD3O75425 235 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 HPP00738 406 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 RLN2P04090 185 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 THBS1P07996 1170 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 OR2T7P0C7T2 308 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 FAM74A3Q4VXF1 159 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 SLC36A1Q7Z2H8 476 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 SDR16C5Q8N3Y7 309 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 EIF4E3Q8N5X7 224 aaKnown RBP15.17■□□□□ 0.02
TRIM39-201ENST00000376656 OR2T27Q8NH04 317 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 V9GY05 133 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 SULT1B1O43704 296 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 RAB28P51157 221 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 TAS2R20P59543 309 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 ERVFC1P60507 584 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 STX4Q12846 297 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 KREMEN2Q8NCW0 462 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 PRSS16Q9NQE7 514 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 NCDNQ9UBB6 729 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 MAFFQ9ULX9 164 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 ICAM5Q9UMF0 924 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 IMPA2O14732 288 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 RNGTTO60942 597 aaKnown RBP15.17■□□□□ 0.02
TRIM39-201ENST00000376656 SNAPC5O75971 98 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 CISD3P0C7P0 127 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 HIST1H1CP16403 213 aaKnown RBP15.17■□□□□ 0.02
TRIM39-201ENST00000376656 ARHGDIBP52566 201 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 CDK3Q00526 305 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 ZNF77Q15935 545 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 TCEAL5Q5H9L2 206 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 LRRC25Q8N386 305 aaPredicted RBP15.17■□□□□ 0.02
TRIM39-201ENST00000376656 RAB42Q8N4Z0 105 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 KCT2Q8NC54 265 aa15.17■□□□□ 0.02
TRIM39-201ENST00000376656 RGP1Q92546 391 aaPredicted RBP15.17■□□□□ 0.02
TRIM39-201ENST00000376656 UBE2QL1A1L167 161 aa15.16■□□□□ 0.02
TRIM39-201ENST00000376656 ANKRD61A6NGH8 418 aa15.16■□□□□ 0.02
TRIM39-201ENST00000376656 F5H5P2 479 aa15.16■□□□□ 0.02
TRIM39-201ENST00000376656 ACOT7O00154 380 aa15.16■□□□□ 0.02
TRIM39-201ENST00000376656 NARSO43776 548 aaKnown RBP15.16■□□□□ 0.02
TRIM39-201ENST00000376656 RAB3AP20336 220 aa15.16■□□□□ 0.02
TRIM39-201ENST00000376656 PLAURQ03405 335 aa15.16■□□□□ 0.02
TRIM39-201ENST00000376656 FHL1Q13642 323 aa15.16■□□□□ 0.02
TRIM39-201ENST00000376656 TRMT12Q53H54 448 aaKnown RBP15.16■□□□□ 0.02
TRIM39-201ENST00000376656 ZNF619Q8N2I2 560 aa15.16■□□□□ 0.02
TRIM39-201ENST00000376656 CLRN3Q8NCR9 226 aa15.16■□□□□ 0.02
TRIM39-201ENST00000376656 SLC7A5P2Q9GIP4 190 aa15.16■□□□□ 0.02
TRIM39-201ENST00000376656 ZNF350Q9GZX5 532 aa15.16■□□□□ 0.02
TRIM39-201ENST00000376656 SLC6A15Q9H2J7 730 aa15.16■□□□□ 0.02
TRIM39-201ENST00000376656 SAV1Q9H4B6 383 aaPredicted RBP15.16■□□□□ 0.02
TRIM39-201ENST00000376656 AGR2O95994 175 aa15.16■□□□□ 0.02
TRIM39-201ENST00000376656 IFNGP01579 166 aa15.16■□□□□ 0.02
TRIM39-201ENST00000376656 CXCL10P02778 98 aa15.16■□□□□ 0.02
TRIM39-201ENST00000376656 RLN1P04808 185 aa15.16■□□□□ 0.02
TRIM39-201ENST00000376656 NID1P14543 1247 aa15.16■□□□□ 0.02
TRIM39-201ENST00000376656 NANOS3P60323 173 aaKnown RBP15.16■□□□□ 0.02
TRIM39-201ENST00000376656 PLA2G7Q13093 441 aa15.16■□□□□ 0.02
TRIM39-201ENST00000376656 HAVCR1Q96D42 359 aa15.16■□□□□ 0.02
TRIM39-201ENST00000376656 OTUB2Q96DC9 234 aa15.16■□□□□ 0.02
TRIM39-201ENST00000376656 ZNF559Q9BR84 538 aa15.16■□□□□ 0.02
TRIM39-201ENST00000376656 TSPAN10Q9H1Z9 355 aaPredicted RBP15.16■□□□□ 0.02
TRIM39-201ENST00000376656 DOCK9Q9BZ29 2069 aa15.16■□□□□ 0.02
TRIM39-201ENST00000376656 LDOC1O95751 146 aaPredicted RBP15.15■□□□□ 0.02
TRIM39-201ENST00000376656 DBIP07108 87 aaKnown RBP15.15■□□□□ 0.02
TRIM39-201ENST00000376656 NGFRP08138 427 aa15.15■□□□□ 0.02
TRIM39-201ENST00000376656 MST1P26927 711 aa15.15■□□□□ 0.02
TRIM39-201ENST00000376656 DEFA5Q01523 94 aa15.15■□□□□ 0.02
TRIM39-201ENST00000376656 SREBF2Q12772 1141 aa15.15■□□□□ 0.02
TRIM39-201ENST00000376656 ARHGAP11AQ6P4F7 1023 aa15.15■□□□□ 0.02
TRIM39-201ENST00000376656 LILRA6Q6PI73 481 aa15.15■□□□□ 0.02
TRIM39-201ENST00000376656 PAQR7Q86WK9 346 aa15.15■□□□□ 0.02
TRIM39-201ENST00000376656 OR2AK2Q8NG84 335 aa15.15■□□□□ 0.02
TRIM39-201ENST00000376656 LRRC46Q96FV0 321 aa15.15■□□□□ 0.02
TRIM39-201ENST00000376656 GPR174Q9BXC1 333 aa15.15■□□□□ 0.02
TRIM39-201ENST00000376656 IL21RQ9HBE5 538 aa15.15■□□□□ 0.02
TRIM39-201ENST00000376656 ADAP2Q9NPF8 381 aa15.15■□□□□ 0.02
TRIM39-201ENST00000376656 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.15■□□□□ 0.02
TRIM39-201ENST00000376656 SPHK1Q9NYA1 384 aa15.15■□□□□ 0.02
TRIM39-201ENST00000376656 PRRT4C9JH25 899 aa15.15■□□□□ 0.02
TRIM39-201ENST00000376656 RPS4Y1P22090 263 aaKnown RBP15.15■□□□□ 0.02
TRIM39-201ENST00000376656 GRPRP30550 384 aa15.15■□□□□ 0.02
TRIM39-201ENST00000376656 SLC6A6P31641 620 aa15.15■□□□□ 0.02
TRIM39-201ENST00000376656 FNDC3BQ53EP0 1204 aaKnown RBP15.15■□□□□ 0.02
TRIM39-201ENST00000376656 DCST2Q5T1A1 773 aa15.15■□□□□ 0.02
TRIM39-201ENST00000376656 FIGNL1Q6PIW4 674 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms