RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 HCCSP53701 268 aa10.9□□□□□ -0.67
VPS13A-205ENST00000376636 RBPJQ06330 500 aa10.9□□□□□ -0.67
VPS13A-205ENST00000376636 OPCMLQ14982 345 aa10.9□□□□□ -0.67
VPS13A-205ENST00000376636 HBMQ6B0K9 141 aa10.9□□□□□ -0.67
VPS13A-205ENST00000376636 KCNG3Q8TAE7 436 aa10.9□□□□□ -0.67
VPS13A-205ENST00000376636 C1GALT1Q9NS00 363 aa10.9□□□□□ -0.67
VPS13A-205ENST00000376636 SLIT3O75094 1523 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 JTBO76095 146 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 OR9Q2Q8NGE9 314 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 TMEM163Q8TC26 289 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 C20orf85Q9H1P6 137 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 POFUT1Q9H488 388 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 BARX1Q9HBU1 254 aaPredicted RBP10.89□□□□□ -0.67
VPS13A-205ENST00000376636 INIPQ9NRY2 104 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 RBFOX1Q9NWB1 397 aaKnown RBP10.89□□□□□ -0.67
VPS13A-205ENST00000376636 TMEM59LQ9UK28 342 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 TMEM88BA6NKF7 163 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 G3V3Q6 166 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 ADRB1P08588 477 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 LIPCP11150 499 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 ACVRL1P37023 503 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 RPS26P11Q5JNZ5 115 aaPredicted RBP10.89□□□□□ -0.67
VPS13A-205ENST00000376636 TXNDC8Q6A555 127 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 LRRC56Q8IYG6 542 aaPredicted RBP10.89□□□□□ -0.67
VPS13A-205ENST00000376636 SECTM1Q8WVN6 248 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 ADIPOR1Q96A54 375 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 PEX11GQ96HA9 241 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 SLC6A20Q9NP91 592 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 DECR2Q9NUI1 292 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 SDHDO14521 159 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 POU3F2P20265 443 aaPredicted RBP10.89□□□□□ -0.67
VPS13A-205ENST00000376636 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.89□□□□□ -0.67
VPS13A-205ENST00000376636 OR51L1Q8NGJ5 315 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 KIRREL1Q96J84 757 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 RIMS3Q9UJD0 308 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 PMS2P2O95744 297 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 F3P13726 295 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 SHC2P98077 582 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 GPR18Q14330 331 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 FCRLBQ6BAA4 426 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 SPATA31D1Q6ZQQ2 1576 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 NDUFAF7Q7L592 441 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 COMMD6Q7Z4G1 85 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 BPIFCQ8NFQ6 507 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 CACFD1Q9UGQ2 172 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 CSNK1G3Q9Y6M4 447 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 TAS2R45P59539 299 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 INCA1Q0VD86 236 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 RNF212Q495C1 297 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 C15orf52Q6ZUT6 534 aaKnown RBP10.89□□□□□ -0.67
VPS13A-205ENST00000376636 MDGA2Q7Z553 956 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 NMES1Q9C002 83 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 NTN4Q9HB63 628 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 AGPAT4Q9NRZ5 378 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 ARHGEF17Q96PE2 2063 aaPredicted RBP10.89□□□□□ -0.67
VPS13A-205ENST00000376636 RABIFP47224 123 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 RGNQ15493 299 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 TBCEQ15813 527 aaPredicted RBP10.89□□□□□ -0.67
VPS13A-205ENST00000376636 TIGITQ495A1 244 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 C3orf38Q5JPI3 329 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 ZNF691Q5VV52 312 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 H3F3CQ6NXT2 135 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 ZFP90Q8TF47 636 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 BCO2Q9BYV7 579 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 ZNF395Q9H8N7 513 aaPredicted RBP10.89□□□□□ -0.67
VPS13A-205ENST00000376636 TMEM269A0A1B0GVZ9 245 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 PSMB1P20618 241 aaKnown RBP10.89□□□□□ -0.67
VPS13A-205ENST00000376636 DHRS11Q6UWP2 260 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 OR8J2Q8NGG1 315 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 TMEM43Q9BTV4 400 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 VAMP8Q9BV40 100 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 KLK4Q9Y5K2 254 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 SLIT2O94813 1529 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 TCRBV21S2A2A0A5A6 115 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 ICMTO60725 284 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 IKZF1Q13422 519 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 OR7A5Q15622 319 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 LCTLQ6UWM7 567 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 ARNT2Q9HBZ2 717 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 RCE1Q9Y256 329 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 ACTL7AQ9Y615 435 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 UBL3O95164 117 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 KCNQ1P51787 676 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 SQSTM1Q13501 440 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 RPL7L1Q6DKI1 246 aaKnown RBP10.89□□□□□ -0.67
VPS13A-205ENST00000376636 PGBD5Q8N414 524 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 MED16Q9Y2X0 877 aa10.89□□□□□ -0.67
VPS13A-205ENST00000376636 SPINT2O43291 252 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 CNIH1O95406 144 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 BPIFB3P59826 476 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 MEPCEQ7L2J0 689 aaKnown RBP10.88□□□□□ -0.67
VPS13A-205ENST00000376636 LIPHQ8WWY8 451 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 ERVMER34-1Q9H9K5 563 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 ARFGEF2Q9Y6D5 1785 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 F10P00742 488 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 BLNKQ8WV28 456 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 GABRPO00591 440 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 OR51I2Q9H344 312 aa10.88□□□□□ -0.67
VPS13A-205ENST00000376636 DCAF13Q9NV06 445 aaKnown RBP10.88□□□□□ -0.67
VPS13A-205ENST00000376636 MED17Q9NVC6 651 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms