RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 C9orf43Q8TAL5 461 aaPredicted RBP11.42□□□□□ -0.58
CLCN6-206ENST00000376496 ZMYND19Q96E35 227 aaPredicted RBP11.42□□□□□ -0.58
CLCN6-206ENST00000376496 TMEM43Q9BTV4 400 aa11.42□□□□□ -0.58
CLCN6-206ENST00000376496 TMEM185BQ9H7F4 350 aa11.42□□□□□ -0.58
CLCN6-206ENST00000376496 MED17Q9NVC6 651 aa11.42□□□□□ -0.58
CLCN6-206ENST00000376496 FBXL2Q9UKC9 423 aa11.42□□□□□ -0.58
CLCN6-206ENST00000376496 CCDC182A6NF36 153 aa11.42□□□□□ -0.58
CLCN6-206ENST00000376496 MAGEB4O15481 346 aaPredicted RBP11.42□□□□□ -0.58
CLCN6-206ENST00000376496 HK1P19367 917 aa11.42□□□□□ -0.58
CLCN6-206ENST00000376496 RAB15P59190 212 aa11.42□□□□□ -0.58
CLCN6-206ENST00000376496 E2F1Q01094 437 aa11.42□□□□□ -0.58
CLCN6-206ENST00000376496 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.42□□□□□ -0.58
CLCN6-206ENST00000376496 RFLNBQ8N5W9 214 aa11.42□□□□□ -0.58
CLCN6-206ENST00000376496 OR8K3Q8NH51 312 aa11.42□□□□□ -0.58
CLCN6-206ENST00000376496 RFKQ969G6 155 aa11.42□□□□□ -0.58
CLCN6-206ENST00000376496 SPACA9Q96E40 222 aaPredicted RBP11.42□□□□□ -0.58
CLCN6-206ENST00000376496 TRMT61AQ96FX7 289 aaKnown RBP11.42□□□□□ -0.58
CLCN6-206ENST00000376496 MND1Q9BWT6 205 aa11.42□□□□□ -0.58
CLCN6-206ENST00000376496 CCDC86Q9H6F5 360 aaKnown RBP11.42□□□□□ -0.58
CLCN6-206ENST00000376496 ISG20L2Q9H9L3 353 aaKnown RBP11.42□□□□□ -0.58
CLCN6-206ENST00000376496 PPP4R1LQ9P1A2 415 aa11.42□□□□□ -0.58
CLCN6-206ENST00000376496 TNFRSF10DQ9UBN6 386 aa11.42□□□□□ -0.58
CLCN6-206ENST00000376496 SLC25A12O75746 678 aa11.42□□□□□ -0.58
CLCN6-206ENST00000376496 DLGAP3O95886 979 aa11.42□□□□□ -0.58
CLCN6-206ENST00000376496 FBXO45P0C2W1 286 aa11.42□□□□□ -0.58
CLCN6-206ENST00000376496 ZNF3P17036 446 aa11.42□□□□□ -0.58
CLCN6-206ENST00000376496 CTXN1P60606 82 aa11.42□□□□□ -0.58
CLCN6-206ENST00000376496 RPS4XP62701 263 aaKnown RBP11.42□□□□□ -0.58
CLCN6-206ENST00000376496 C17orf67Q0P5P2 114 aa11.42□□□□□ -0.58
CLCN6-206ENST00000376496 FOXF1Q12946 379 aa11.42□□□□□ -0.58
CLCN6-206ENST00000376496 ATCAYQ86WG3 371 aa11.42□□□□□ -0.58
CLCN6-206ENST00000376496 PRSS33Q8NF86 280 aa11.42□□□□□ -0.58
CLCN6-206ENST00000376496 SLC22A8Q8TCC7 542 aa11.42□□□□□ -0.58
CLCN6-206ENST00000376496 SLC39A7Q92504 469 aa11.42□□□□□ -0.58
CLCN6-206ENST00000376496 ARL5BQ96KC2 179 aa11.42□□□□□ -0.58
CLCN6-206ENST00000376496 TEAD3Q99594 435 aa11.42□□□□□ -0.58
CLCN6-206ENST00000376496 PTDSS2Q9BVG9 487 aa11.42□□□□□ -0.58
CLCN6-206ENST00000376496 RACGAP1Q9H0H5 632 aa11.42□□□□□ -0.58
CLCN6-206ENST00000376496 FGF20Q9NP95 211 aaPredicted RBP11.42□□□□□ -0.58
CLCN6-206ENST00000376496 EXOSC4Q9NPD3 245 aaKnown RBP11.42□□□□□ -0.58
CLCN6-206ENST00000376496 SPIN1Q9Y657 262 aaPredicted RBP11.42□□□□□ -0.58
CLCN6-206ENST00000376496 OR6C68A6NDL8 312 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 SNTNA6NMZ2 147 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 C12orf71A8MTZ7 269 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 H3BML4 177 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 M0R3G1 203 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 DKK1O94907 266 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 ASAH2BP0C7U1 165 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 PRKCAP17252 672 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 CASP3P42574 277 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 C19orf57Q0VDD7 668 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 IL10RAQ13651 578 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 ALG10Q5BKT4 473 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 NUP54Q7Z3B4 507 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 NANOGNBQ7Z5D8 188 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 OR10H4Q8NGA5 316 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 CDC6Q99741 560 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 SLC19A3Q9BZV2 496 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 ASB6Q9NWX5 421 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 FARSAQ9Y285 508 aaKnown RBP11.41□□□□□ -0.58
CLCN6-206ENST00000376496 GPX5O75715 221 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 TNFSF15O95150 251 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 BGLAPP02818 100 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 PAICSP22234 425 aaKnown RBP11.41□□□□□ -0.58
CLCN6-206ENST00000376496 TGM1P22735 817 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 AHCYP23526 432 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 NAA10P41227 235 aaPredicted RBP11.41□□□□□ -0.58
CLCN6-206ENST00000376496 CDKN2AP42771 156 aaKnown RBP11.41□□□□□ -0.58
CLCN6-206ENST00000376496 POLR2HP52434 150 aaKnown RBP11.41□□□□□ -0.58
CLCN6-206ENST00000376496 ARHGAP11AQ6P4F7 1023 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 PROKR2Q8NFJ6 384 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 TBC1D15Q8TC07 691 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 LIN37Q96GY3 246 aaPredicted RBP11.41□□□□□ -0.58
CLCN6-206ENST00000376496 ZNF649Q9BS31 505 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 SPRY4Q9C004 299 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 NRIP3Q9NQ35 241 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 MRPS18AQ9NVS2 196 aaKnown RBP11.41□□□□□ -0.58
CLCN6-206ENST00000376496 CHCHD3Q9NX63 227 aaKnown RBP11.41□□□□□ -0.58
CLCN6-206ENST00000376496 PMF1-BGLAPU3KQ54 211 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 ZNF292O60281 2723 aa11.41□□□□□ -0.58
CLCN6-206ENST00000376496 CUL9Q8IWT3 2517 aa11.4□□□□□ -0.58
CLCN6-206ENST00000376496 CCDC187A0A096LP49 1063 aa11.4□□□□□ -0.58
CLCN6-206ENST00000376496 CCRL2O00421 344 aa11.4□□□□□ -0.58
CLCN6-206ENST00000376496 EFNA2O43921 213 aa11.4□□□□□ -0.58
CLCN6-206ENST00000376496 CCL3P10147 92 aa11.4□□□□□ -0.58
CLCN6-206ENST00000376496 CDK4P11802 303 aa11.4□□□□□ -0.58
CLCN6-206ENST00000376496 PYCR1P32322 319 aa11.4□□□□□ -0.58
CLCN6-206ENST00000376496 ENTPD1P49961 510 aa11.4□□□□□ -0.58
CLCN6-206ENST00000376496 SLC6A19Q695T7 634 aa11.4□□□□□ -0.58
CLCN6-206ENST00000376496 NDUFAF7Q7L592 441 aa11.4□□□□□ -0.58
CLCN6-206ENST00000376496 GRINAQ7Z429 371 aa11.4□□□□□ -0.58
CLCN6-206ENST00000376496 LSM14AQ8ND56 463 aaKnown RBP11.4□□□□□ -0.58
CLCN6-206ENST00000376496 OIT3Q8WWZ8 545 aa11.4□□□□□ -0.58
CLCN6-206ENST00000376496 ZHX1-C8orf76Q96EF9 292 aa11.4□□□□□ -0.58
CLCN6-206ENST00000376496 ERVK13-1Q9NX77 482 aa11.4□□□□□ -0.58
CLCN6-206ENST00000376496 CHCHD2Q9Y6H1 151 aaPredicted RBP11.4□□□□□ -0.58
CLCN6-206ENST00000376496 SCG5P05408 212 aa11.4□□□□□ -0.58
CLCN6-206ENST00000376496 SLC2A5P22732 501 aa11.4□□□□□ -0.58
CLCN6-206ENST00000376496 GRPRP30550 384 aa11.4□□□□□ -0.58
CLCN6-206ENST00000376496 DLSTP36957 453 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms