RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 TRIM44Q96DX7 344 aaPredicted RBP20.28■□□□□ 0.84
C9orf47-202ENST00000375850 PIMREGQ9BSJ6 248 aa20.28■□□□□ 0.84
C9orf47-202ENST00000375850 KATNB1Q9BVA0 655 aa20.28■□□□□ 0.84
C9orf47-202ENST00000375850 NUF2Q9BZD4 464 aa20.28■□□□□ 0.84
C9orf47-202ENST00000375850 KCNS2Q9ULS6 477 aa20.28■□□□□ 0.84
C9orf47-202ENST00000375850 ALPK2Q86TB3 2170 aa20.27■□□□□ 0.84
C9orf47-202ENST00000375850 A0A096LPI6 279 aa20.27■□□□□ 0.84
C9orf47-202ENST00000375850 KRT33AO76009 404 aa20.27■□□□□ 0.84
C9orf47-202ENST00000375850 PDE5AO76074 875 aa20.27■□□□□ 0.84
C9orf47-202ENST00000375850 PGRP06401 933 aa20.27■□□□□ 0.84
C9orf47-202ENST00000375850 COPZ1P61923 177 aa20.27■□□□□ 0.84
C9orf47-202ENST00000375850 CEACAM7Q14002 265 aa20.27■□□□□ 0.84
C9orf47-202ENST00000375850 C3orf36Q3SXR2 165 aa20.27■□□□□ 0.84
C9orf47-202ENST00000375850 TMEM225Q6GV28 225 aa20.27■□□□□ 0.84
C9orf47-202ENST00000375850 FAM166AQ6J272 317 aa20.27■□□□□ 0.84
C9orf47-202ENST00000375850 ZNF621Q6ZSS3 439 aa20.27■□□□□ 0.84
C9orf47-202ENST00000375850 SPATA19Q7Z5L4 167 aa20.27■□□□□ 0.84
C9orf47-202ENST00000375850 ZIC4Q8N9L1 334 aa20.27■□□□□ 0.84
C9orf47-202ENST00000375850 GLB1L3Q8NCI6 653 aaPredicted RBP20.27■□□□□ 0.84
C9orf47-202ENST00000375850 ZNF540Q8NDQ6 660 aa20.27■□□□□ 0.84
C9orf47-202ENST00000375850 NANOS1Q8WY41 292 aaKnown RBP20.27■□□□□ 0.84
C9orf47-202ENST00000375850 SORT1Q99523 831 aa20.27■□□□□ 0.84
C9orf47-202ENST00000375850 MOKQ9UQ07 419 aa20.27■□□□□ 0.84
C9orf47-202ENST00000375850 ZC3H12DA2A288 527 aaKnown RBP20.26■□□□□ 0.83
C9orf47-202ENST00000375850 VWC2LB2RUY7 222 aa20.26■□□□□ 0.83
C9orf47-202ENST00000375850 ZNF587BE7ETH6 402 aa20.26■□□□□ 0.83
C9orf47-202ENST00000375850 RGS16O15492 202 aaPredicted RBP20.26■□□□□ 0.83
C9orf47-202ENST00000375850 CRYAAP02489 173 aa20.26■□□□□ 0.83
C9orf47-202ENST00000375850 OR7A5Q15622 319 aa20.26■□□□□ 0.83
C9orf47-202ENST00000375850 LIN52Q52LA3 116 aa20.26■□□□□ 0.83
C9orf47-202ENST00000375850 WBP2NLQ6ICG8 309 aa20.26■□□□□ 0.83
C9orf47-202ENST00000375850 TMEM99Q8N816 258 aa20.26■□□□□ 0.83
C9orf47-202ENST00000375850 FBXO17Q96EF6 278 aa20.26■□□□□ 0.83
C9orf47-202ENST00000375850 ZNF385AQ96PM9 386 aaKnown RBP20.26■□□□□ 0.83
C9orf47-202ENST00000375850 SLC38A2Q96QD8 506 aa20.26■□□□□ 0.83
C9orf47-202ENST00000375850 OR52E6Q96RD3 313 aa20.26■□□□□ 0.83
C9orf47-202ENST00000375850 ZBTB18Q99592 522 aa20.26■□□□□ 0.83
C9orf47-202ENST00000375850 C20orf27Q9GZN8 174 aa20.26■□□□□ 0.83
C9orf47-202ENST00000375850 AIG1Q9NVV5 245 aa20.26■□□□□ 0.83
C9orf47-202ENST00000375850 P2RX2Q9UBL9 471 aa20.26■□□□□ 0.83
C9orf47-202ENST00000375850 LOC390937A0A1W2PQ73 354 aa20.25■□□□□ 0.83
C9orf47-202ENST00000375850 CDHR4A6H8M9 788 aa20.25■□□□□ 0.83
C9orf47-202ENST00000375850 A8MVM7 634 aa20.25■□□□□ 0.83
C9orf47-202ENST00000375850 B9A039 149 aa20.25■□□□□ 0.83
C9orf47-202ENST00000375850 AKR7A3O95154 331 aa20.25■□□□□ 0.83
C9orf47-202ENST00000375850 HOXB1P14653 301 aaPredicted RBP20.25■□□□□ 0.83
C9orf47-202ENST00000375850 ZNF16P17020 682 aaPredicted RBP20.25■□□□□ 0.83
C9orf47-202ENST00000375850 HNF1AP20823 631 aa20.25■□□□□ 0.83
C9orf47-202ENST00000375850 SERPINF1P36955 418 aa20.25■□□□□ 0.83
C9orf47-202ENST00000375850 NR4A2P43354 598 aa20.25■□□□□ 0.83
C9orf47-202ENST00000375850 UBE2NP61088 152 aaKnown RBP20.25■□□□□ 0.83
C9orf47-202ENST00000375850 STX3Q13277 289 aa20.25■□□□□ 0.83
C9orf47-202ENST00000375850 MST1LQ2TV78 715 aa20.25■□□□□ 0.83
C9orf47-202ENST00000375850 KRT71Q3SY84 523 aa20.25■□□□□ 0.83
C9orf47-202ENST00000375850 GPAT4Q86UL3 456 aa20.25■□□□□ 0.83
C9orf47-202ENST00000375850 FAM169BQ8N8A8 192 aa20.25■□□□□ 0.83
C9orf47-202ENST00000375850 MAGEE2Q8TD90 523 aaPredicted RBP20.25■□□□□ 0.83
C9orf47-202ENST00000375850 AURKBQ96GD4 344 aaPredicted RBP20.25■□□□□ 0.83
C9orf47-202ENST00000375850 ARMC7Q9H6L4 198 aa20.25■□□□□ 0.83
C9orf47-202ENST00000375850 CACYBPQ9HB71 228 aaKnown RBP20.25■□□□□ 0.83
C9orf47-202ENST00000375850 RASD1Q9Y272 281 aa20.25■□□□□ 0.83
C9orf47-202ENST00000375850 ARPC4-TTLL3A0A0A6YYG9 625 aa20.24■□□□□ 0.83
C9orf47-202ENST00000375850 SRD5A1P18405 259 aa20.24■□□□□ 0.83
C9orf47-202ENST00000375850 SH3BGRP55822 239 aaPredicted RBP20.24■□□□□ 0.83
C9orf47-202ENST00000375850 UFM1P61960 85 aa20.24■□□□□ 0.83
C9orf47-202ENST00000375850 TBRG1Q3YBR2 411 aa20.24■□□□□ 0.83
C9orf47-202ENST00000375850 HIKESHIQ53FT3 197 aa20.24■□□□□ 0.83
C9orf47-202ENST00000375850 MREGQ8N565 214 aa20.24■□□□□ 0.83
C9orf47-202ENST00000375850 ANKK1Q8NFD2 765 aa20.24■□□□□ 0.83
C9orf47-202ENST00000375850 OR1K1Q8NGR3 316 aa20.24■□□□□ 0.83
C9orf47-202ENST00000375850 OR52P1PQ8NH57 321 aa20.24■□□□□ 0.83
C9orf47-202ENST00000375850 CA10Q9NS85 328 aa20.24■□□□□ 0.83
C9orf47-202ENST00000375850 THUMPD1Q9NXG2 353 aaKnown RBP20.24■□□□□ 0.83
C9orf47-202ENST00000375850 DSPPQ9NZW4 1301 aa20.24■□□□□ 0.83
C9orf47-202ENST00000375850 VSTM5A8MXK1 200 aa20.23■□□□□ 0.83
C9orf47-202ENST00000375850 RFXANKO14593 260 aa20.23■□□□□ 0.83
C9orf47-202ENST00000375850 CDH2P19022 906 aaPredicted RBP20.23■□□□□ 0.83
C9orf47-202ENST00000375850 CRISP3P54108 245 aa20.23■□□□□ 0.83
C9orf47-202ENST00000375850 GGTLC2Q14390 218 aa20.23■□□□□ 0.83
C9orf47-202ENST00000375850 LARS2Q15031 903 aaKnown RBP20.23■□□□□ 0.83
C9orf47-202ENST00000375850 EFNB3Q15768 340 aa20.23■□□□□ 0.83
C9orf47-202ENST00000375850 RNF220Q5VTB9 566 aa20.23■□□□□ 0.83
C9orf47-202ENST00000375850 WDR93Q6P2C0 686 aa20.23■□□□□ 0.83
C9orf47-202ENST00000375850 SLC46A3Q7Z3Q1 461 aa20.23■□□□□ 0.83
C9orf47-202ENST00000375850 OR4F15Q8NGB8 312 aa20.23■□□□□ 0.83
C9orf47-202ENST00000375850 TEX37Q96LM6 180 aa20.23■□□□□ 0.83
C9orf47-202ENST00000375850 SORCS2Q96PQ0 1159 aa20.23■□□□□ 0.83
C9orf47-202ENST00000375850 LINC00470Q9BZP3 86 aa20.23■□□□□ 0.83
C9orf47-202ENST00000375850 CRNNQ9UBG3 495 aaPredicted RBP20.23■□□□□ 0.83
C9orf47-202ENST00000375850 IGHV1-18A0A0C4DH31 117 aa20.22■□□□□ 0.83
C9orf47-202ENST00000375850 IL6P05231 212 aa20.22■□□□□ 0.83
C9orf47-202ENST00000375850 ALDOCP09972 364 aaKnown RBP20.22■□□□□ 0.83
C9orf47-202ENST00000375850 TFPTP0C1Z6 253 aa20.22■□□□□ 0.83
C9orf47-202ENST00000375850 APEHP13798 732 aaKnown RBP20.22■□□□□ 0.83
C9orf47-202ENST00000375850 CREB3L2Q70SY1 520 aa20.22■□□□□ 0.83
C9orf47-202ENST00000375850 STK35Q8TDR2 534 aa20.22■□□□□ 0.83
C9orf47-202ENST00000375850 ADPRHL2Q9NX46 363 aa20.22■□□□□ 0.83
C9orf47-202ENST00000375850 ZNF232Q9UNY5 417 aa20.22■□□□□ 0.83
C9orf47-202ENST00000375850 LOC100289279A0A1B0GTE1 492 aa20.21■□□□□ 0.83
C9orf47-202ENST00000375850 TMEM247A6NEH6 219 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms