RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 CDSNQ15517 529 aa16.59■□□□□ 0.25
CDX4-201ENST00000373514 ZNF239Q16600 458 aaKnown RBP16.59■□□□□ 0.25
CDX4-201ENST00000373514 ULK3Q6PHR2 472 aa16.59■□□□□ 0.25
CDX4-201ENST00000373514 TBPL2Q6SJ96 375 aa16.59■□□□□ 0.25
CDX4-201ENST00000373514 ZDHHC13Q8IUH4 622 aa16.59■□□□□ 0.25
CDX4-201ENST00000373514 CCDC71Q8IV32 467 aaPredicted RBP16.59■□□□□ 0.25
CDX4-201ENST00000373514 GCNT2Q8N0V5 402 aa16.59■□□□□ 0.25
CDX4-201ENST00000373514 FAM26EQ8N5C1 309 aa16.59■□□□□ 0.25
CDX4-201ENST00000373514 PACRGLQ8N7B6 248 aa16.59■□□□□ 0.25
CDX4-201ENST00000373514 MBD3L2Q8NHZ7 208 aaPredicted RBP16.59■□□□□ 0.25
CDX4-201ENST00000373514 ROBO4Q8WZ75 1007 aa16.59■□□□□ 0.25
CDX4-201ENST00000373514 OSTF1Q92882 214 aa16.59■□□□□ 0.25
CDX4-201ENST00000373514 SDCCAG3Q96C92 435 aa16.59■□□□□ 0.25
CDX4-201ENST00000373514 DDIT4LQ96D03 193 aa16.59■□□□□ 0.25
CDX4-201ENST00000373514 PIP5K1AQ99755 562 aa16.59■□□□□ 0.25
CDX4-201ENST00000373514 CALHM2Q9HA72 323 aa16.59■□□□□ 0.25
CDX4-201ENST00000373514 Q9UFV3 132 aa16.59■□□□□ 0.25
CDX4-201ENST00000373514 SAMHD1Q9Y3Z3 626 aaKnown RBP16.59■□□□□ 0.25
CDX4-201ENST00000373514 MAGED1Q9Y5V3 778 aaPredicted RBP16.59■□□□□ 0.25
CDX4-201ENST00000373514 CACNA1CQ13936 2221 aa16.58■□□□□ 0.24
CDX4-201ENST00000373514 EI24O14681 340 aa16.58■□□□□ 0.24
CDX4-201ENST00000373514 ZNF208O43345 1280 aa16.58■□□□□ 0.24
CDX4-201ENST00000373514 DNAJA1P31689 397 aaKnown RBP16.58■□□□□ 0.24
CDX4-201ENST00000373514 CARD18P57730 90 aa16.58■□□□□ 0.24
CDX4-201ENST00000373514 PIN1Q13526 163 aaPredicted RBP16.58■□□□□ 0.24
CDX4-201ENST00000373514 OTUD3Q5T2D3 398 aaPredicted RBP16.58■□□□□ 0.24
CDX4-201ENST00000373514 PDSS1Q5T2R2 415 aa16.58■□□□□ 0.24
CDX4-201ENST00000373514 ZNF613Q6PF04 617 aa16.58■□□□□ 0.24
CDX4-201ENST00000373514 SHQ1Q6PI26 577 aaKnown RBP16.58■□□□□ 0.24
CDX4-201ENST00000373514 P4HA3Q7Z4N8 544 aa16.58■□□□□ 0.24
CDX4-201ENST00000373514 GDF7Q7Z4P5 450 aa16.58■□□□□ 0.24
CDX4-201ENST00000373514 STK32CQ86UX6 486 aa16.58■□□□□ 0.24
CDX4-201ENST00000373514 HS3ST5Q8IZT8 346 aa16.58■□□□□ 0.24
CDX4-201ENST00000373514 DNAJA4Q8WW22 397 aaPredicted RBP16.58■□□□□ 0.24
CDX4-201ENST00000373514 SLC38A4Q969I6 547 aa16.58■□□□□ 0.24
CDX4-201ENST00000373514 UCN2Q96RP3 112 aa16.58■□□□□ 0.24
CDX4-201ENST00000373514 EPYCQ99645 322 aa16.58■□□□□ 0.24
CDX4-201ENST00000373514 C8orf4Q9NR00 106 aa16.58■□□□□ 0.24
CDX4-201ENST00000373514 RHCGQ9UBD6 479 aa16.58■□□□□ 0.24
CDX4-201ENST00000373514 RNF6Q9Y252 685 aa16.58■□□□□ 0.24
CDX4-201ENST00000373514 TRAPPC13A5PLN9 417 aa16.57■□□□□ 0.24
CDX4-201ENST00000373514 FFAR1O14842 300 aa16.57■□□□□ 0.24
CDX4-201ENST00000373514 CHP2O43745 196 aa16.57■□□□□ 0.24
CDX4-201ENST00000373514 HOXD4P09016 255 aaPredicted RBP16.57■□□□□ 0.24
CDX4-201ENST00000373514 FPR1P21462 350 aa16.57■□□□□ 0.24
CDX4-201ENST00000373514 TAS2R41P59536 307 aa16.57■□□□□ 0.24
CDX4-201ENST00000373514 TMEM211Q6ICI0 200 aa16.57■□□□□ 0.24
CDX4-201ENST00000373514 CYP4Z1Q86W10 505 aa16.57■□□□□ 0.24
CDX4-201ENST00000373514 HIPK1Q86Z02 1210 aa16.57■□□□□ 0.24
CDX4-201ENST00000373514 ITLN2Q8WWU7 325 aaPredicted RBP16.57■□□□□ 0.24
CDX4-201ENST00000373514 SLC41A3Q96GZ6 507 aa16.57■□□□□ 0.24
CDX4-201ENST00000373514 PRRC1Q96M27 445 aa16.57■□□□□ 0.24
CDX4-201ENST00000373514 C12orf10Q9HB07 376 aa16.57■□□□□ 0.24
CDX4-201ENST00000373514 A4GNTQ9UNA3 340 aa16.57■□□□□ 0.24
CDX4-201ENST00000373514 LYVE1Q9Y5Y7 322 aa16.57■□□□□ 0.24
CDX4-201ENST00000373514 A0A087WUJ7 227 aa16.56■□□□□ 0.24
CDX4-201ENST00000373514 A8MVM7 634 aa16.56■□□□□ 0.24
CDX4-201ENST00000373514 ZNF814B7Z6K7 855 aa16.56■□□□□ 0.24
CDX4-201ENST00000373514 H0YJX3 145 aa16.56■□□□□ 0.24
CDX4-201ENST00000373514 SULT2B1O00204 365 aa16.56■□□□□ 0.24
CDX4-201ENST00000373514 TNFRSF11BO00300 401 aa16.56■□□□□ 0.24
CDX4-201ENST00000373514 SMAD9O15198 467 aaKnown RBP16.56■□□□□ 0.24
CDX4-201ENST00000373514 NPIPB7O75200 414 aa16.56■□□□□ 0.24
CDX4-201ENST00000373514 ENPP1P22413 925 aa16.56■□□□□ 0.24
CDX4-201ENST00000373514 IDUAP35475 653 aa16.56■□□□□ 0.24
CDX4-201ENST00000373514 RPS5P46782 204 aaKnown RBP16.56■□□□□ 0.24
CDX4-201ENST00000373514 ARHGDIAP52565 204 aa16.56■□□□□ 0.24
CDX4-201ENST00000373514 AGFG1P52594 562 aaKnown RBP16.56■□□□□ 0.24
CDX4-201ENST00000373514 FOXF2Q12947 444 aa16.56■□□□□ 0.24
CDX4-201ENST00000373514 DAG1Q14118 895 aa16.56■□□□□ 0.24
CDX4-201ENST00000373514 LAPTM4AQ15012 233 aa16.56■□□□□ 0.24
CDX4-201ENST00000373514 SF3B4Q15427 424 aaKnown RBP eCLIP16.56■□□□□ 0.24
CDX4-201ENST00000373514 TAF11Q15544 211 aa16.56■□□□□ 0.24
CDX4-201ENST00000373514 C1orf140Q5VVS0 124 aa16.56■□□□□ 0.24
CDX4-201ENST00000373514 TMPPEQ6ZT21 453 aa16.56■□□□□ 0.24
CDX4-201ENST00000373514 MAGEE2Q8TD90 523 aaPredicted RBP16.56■□□□□ 0.24
CDX4-201ENST00000373514 RND1Q92730 232 aa16.56■□□□□ 0.24
CDX4-201ENST00000373514 WNT2BQ93097 391 aa16.56■□□□□ 0.24
CDX4-201ENST00000373514 CPNE4Q96A23 557 aaPredicted RBP16.56■□□□□ 0.24
CDX4-201ENST00000373514 KTI12Q96EK9 354 aaPredicted RBP16.56■□□□□ 0.24
CDX4-201ENST00000373514 NRBF2Q96F24 287 aa16.56■□□□□ 0.24
CDX4-201ENST00000373514 PRSS27Q9BQR3 290 aa16.56■□□□□ 0.24
CDX4-201ENST00000373514 PTDSS2Q9BVG9 487 aa16.56■□□□□ 0.24
CDX4-201ENST00000373514 SELENONQ9NZV5 590 aa16.56■□□□□ 0.24
CDX4-201ENST00000373514 MCTS1Q9ULC4 181 aaKnown RBP16.56■□□□□ 0.24
CDX4-201ENST00000373514 ZNF175Q9Y473 711 aa16.56■□□□□ 0.24
CDX4-201ENST00000373514 SYNGR4O95473 234 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 PMS2P2O95744 297 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 PNMTP11086 282 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 CEACAM8P31997 349 aaPredicted RBP16.55■□□□□ 0.24
CDX4-201ENST00000373514 TIMP3P35625 211 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 PER3P56645 1201 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 OR7A5Q15622 319 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 SWT1Q5T5J6 900 aaKnown RBP16.55■□□□□ 0.24
CDX4-201ENST00000373514 RIPPLY2Q5TAB7 128 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 NKAIN4Q8IVV8 208 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 OR4C15Q8NGM1 316 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 OR52J3Q8NH60 311 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 SSC4DQ8WTU2 575 aa16.55■□□□□ 0.24
CDX4-201ENST00000373514 ABHD3Q8WU67 409 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms