RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 PTDSS2Q9BVG9 487 aa23.8■■□□□ 1.4
ATPAF1-202ENST00000371937 PTPRZ1P23471 2315 aaPredicted RBP23.8■■□□□ 1.4
ATPAF1-202ENST00000371937 IRGMA1A4Y4 181 aa23.8■■□□□ 1.4
ATPAF1-202ENST00000371937 ARPC3O15145 178 aa23.8■■□□□ 1.4
ATPAF1-202ENST00000371937 FADS2O95864 444 aaKnown RBP23.8■■□□□ 1.4
ATPAF1-202ENST00000371937 ZNF3P17036 446 aa23.8■■□□□ 1.4
ATPAF1-202ENST00000371937 ADH6P28332 368 aa23.8■■□□□ 1.4
ATPAF1-202ENST00000371937 UQCRC1P31930 480 aa23.8■■□□□ 1.4
ATPAF1-202ENST00000371937 CAMK2BQ13554 666 aa23.8■■□□□ 1.4
ATPAF1-202ENST00000371937 KLHL22Q53GT1 634 aa23.8■■□□□ 1.4
ATPAF1-202ENST00000371937 C1QL3Q5VWW1 255 aa23.8■■□□□ 1.4
ATPAF1-202ENST00000371937 CPOQ8IVL8 374 aa23.8■■□□□ 1.4
ATPAF1-202ENST00000371937 FAR1Q8WVX9 515 aa23.8■■□□□ 1.4
ATPAF1-202ENST00000371937 THAP4Q8WY91 577 aa23.8■■□□□ 1.4
ATPAF1-202ENST00000371937 MUL1Q969V5 352 aa23.8■■□□□ 1.4
ATPAF1-202ENST00000371937 ZBTB8AQ96BR9 441 aa23.8■■□□□ 1.4
ATPAF1-202ENST00000371937 ACOT13Q9NPJ3 140 aa23.8■■□□□ 1.4
ATPAF1-202ENST00000371937 NRIP3Q9NQ35 241 aa23.8■■□□□ 1.4
ATPAF1-202ENST00000371937 HINT3Q9NQE9 182 aaKnown RBP23.8■■□□□ 1.4
ATPAF1-202ENST00000371937 TSPAN19P0C672 248 aa23.79■■□□□ 1.4
ATPAF1-202ENST00000371937 CASRP41180 1078 aa23.79■■□□□ 1.4
ATPAF1-202ENST00000371937 AQP2P41181 271 aa23.79■■□□□ 1.4
ATPAF1-202ENST00000371937 MAP2K4P45985 399 aa23.79■■□□□ 1.4
ATPAF1-202ENST00000371937 CDH11P55287 796 aa23.79■■□□□ 1.4
ATPAF1-202ENST00000371937 OC90Q02509 493 aaPredicted RBP23.79■■□□□ 1.4
ATPAF1-202ENST00000371937 ALG10Q5BKT4 473 aa23.79■■□□□ 1.4
ATPAF1-202ENST00000371937 TIGD3Q6B0B8 471 aa23.79■■□□□ 1.4
ATPAF1-202ENST00000371937 GTF2IRD2BQ6EKJ0 949 aa23.79■■□□□ 1.4
ATPAF1-202ENST00000371937 CCDC81Q6ZN84 652 aa23.79■■□□□ 1.4
ATPAF1-202ENST00000371937 GTF2IRD2Q86UP8 949 aa23.79■■□□□ 1.4
ATPAF1-202ENST00000371937 GID4Q8IVV7 300 aa23.79■■□□□ 1.4
ATPAF1-202ENST00000371937 C9orf43Q8TAL5 461 aaPredicted RBP23.79■■□□□ 1.4
ATPAF1-202ENST00000371937 FCGR1BQ92637 280 aa23.79■■□□□ 1.4
ATPAF1-202ENST00000371937 NPAS1Q99742 590 aa23.79■■□□□ 1.4
ATPAF1-202ENST00000371937 CDCA4Q9BXL8 241 aa23.79■■□□□ 1.4
ATPAF1-202ENST00000371937 OR11A1Q9GZK7 315 aa23.79■■□□□ 1.4
ATPAF1-202ENST00000371937 RBM38Q9H0Z9 239 aaKnown RBP23.79■■□□□ 1.4
ATPAF1-202ENST00000371937 MRPS18AQ9NVS2 196 aaKnown RBP23.79■■□□□ 1.4
ATPAF1-202ENST00000371937 KLHL21Q9UJP4 597 aa23.79■■□□□ 1.4
ATPAF1-202ENST00000371937 SLC6A5Q9Y345 797 aa23.79■■□□□ 1.4
ATPAF1-202ENST00000371937 IER3IP1Q9Y5U9 82 aa23.79■■□□□ 1.4
ATPAF1-202ENST00000371937 SPIN1Q9Y657 262 aaPredicted RBP23.79■■□□□ 1.4
ATPAF1-202ENST00000371937 ZNF99A8MXY4 864 aaPredicted RBP23.78■■□□□ 1.4
ATPAF1-202ENST00000371937 MTNR1AP48039 350 aa23.78■■□□□ 1.4
ATPAF1-202ENST00000371937 RRADP55042 308 aa23.78■■□□□ 1.4
ATPAF1-202ENST00000371937 TBCEQ15813 527 aaPredicted RBP23.78■■□□□ 1.4
ATPAF1-202ENST00000371937 ZNF800Q2TB10 664 aaPredicted RBP eCLIP23.78■■□□□ 1.4
ATPAF1-202ENST00000371937 PSD4Q8NDX1 1056 aa23.78■■□□□ 1.4
ATPAF1-202ENST00000371937 OR13F1Q8NGS4 319 aa23.78■■□□□ 1.4
ATPAF1-202ENST00000371937 MOSPD2Q8NHP6 518 aa23.78■■□□□ 1.4
ATPAF1-202ENST00000371937 SLC25A36Q96CQ1 311 aa23.78■■□□□ 1.4
ATPAF1-202ENST00000371937 TMEM80Q96HE8 168 aa23.78■■□□□ 1.4
ATPAF1-202ENST00000371937 CCDC160A6NGH7 325 aa23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 PRR23D1E9PI22 279 aaPredicted RBP23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 SEC14L2O76054 403 aa23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 PRR23D2P0DMB1 279 aaPredicted RBP23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 APEHP13798 732 aaKnown RBP23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 PAICSP22234 425 aaKnown RBP23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 FKBP2P26885 142 aaKnown RBP23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 DSCR4P56555 118 aaPredicted RBP23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 MFSD13AQ14CX5 517 aa23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 GXYLT1Q4G148 440 aa23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 PLBD1Q6P4A8 553 aa23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 IGFN1Q86VF2 1251 aa23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 POC1BQ8TC44 478 aa23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 OTULINQ96BN8 352 aa23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 TAPBPLQ9BX59 468 aa23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 CEPT1Q9Y6K0 416 aa23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 DOCK10Q96BY6 2186 aa23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 H3BSA7 217 aa23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 GFRA3O60609 400 aa23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 CBR3O75828 277 aa23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 HTR1FP30939 366 aa23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 RPL18Q07020 188 aaKnown RBP23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 RAB40BQ12829 278 aa23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 ITGADQ13349 1161 aa23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 ZNF362Q5T0B9 420 aaPredicted RBP23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 VASH2Q86V25 355 aa23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 KATNB1Q9BVA0 655 aa23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 POTEKPQ9BYX7 375 aa23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 TIMMDC1Q9NPL8 285 aa23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 LRFN1Q9P244 771 aa23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 COMMD3-BMI1R4GMX3 469 aa23.77■■□□□ 1.4
ATPAF1-202ENST00000371937 CDK2AP1O14519 115 aa23.76■■□□□ 1.39
ATPAF1-202ENST00000371937 TRIM3O75382 744 aaPredicted RBP23.76■■□□□ 1.39
ATPAF1-202ENST00000371937 CD14P08571 375 aa23.76■■□□□ 1.39
ATPAF1-202ENST00000371937 DPP4P27487 766 aa23.76■■□□□ 1.39
ATPAF1-202ENST00000371937 SGCBQ16585 318 aa23.76■■□□□ 1.39
ATPAF1-202ENST00000371937 C3orf33Q6P1S2 294 aa23.76■■□□□ 1.39
ATPAF1-202ENST00000371937 LRRC75AQ8NAA5 344 aa23.76■■□□□ 1.39
ATPAF1-202ENST00000371937 OR5J2Q8NH18 312 aa23.76■■□□□ 1.39
ATPAF1-202ENST00000371937 MFSD8Q8NHS3 518 aa23.76■■□□□ 1.39
ATPAF1-202ENST00000371937 RNFT2Q96EX2 444 aa23.76■■□□□ 1.39
ATPAF1-202ENST00000371937 CRELD1Q96HD1 420 aa23.76■■□□□ 1.39
ATPAF1-202ENST00000371937 JSRP1Q96MG2 331 aaPredicted RBP23.76■■□□□ 1.39
ATPAF1-202ENST00000371937 GNRHR2Q96P88 292 aa23.76■■□□□ 1.39
ATPAF1-202ENST00000371937 UTP23Q9BRU9 249 aaKnown RBP23.76■■□□□ 1.39
ATPAF1-202ENST00000371937 ASPNQ9BXN1 380 aa23.76■■□□□ 1.39
ATPAF1-202ENST00000371937 ADAM18Q9Y3Q7 739 aa23.76■■□□□ 1.39
ATPAF1-202ENST00000371937 FAM183AA6NL82 134 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms