RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 SLC35A1P78382 337 aa18.23■□□□□ 0.51
LMO4-202ENST00000370544 ACBD4Q8NC06 268 aa18.23■□□□□ 0.51
LMO4-202ENST00000370544 ATOH1Q92858 354 aaPredicted RBP18.23■□□□□ 0.51
LMO4-202ENST00000370544 ELMOD3Q96FG2 381 aa18.23■□□□□ 0.51
LMO4-202ENST00000370544 AMBRA1Q9C0C7 1298 aa18.23■□□□□ 0.51
LMO4-202ENST00000370544 B3GNT2Q9NY97 397 aa18.23■□□□□ 0.51
LMO4-202ENST00000370544 A0A1W2PQ09 198 aa18.23■□□□□ 0.51
LMO4-202ENST00000370544 PLSCR5A0PG75 271 aa18.23■□□□□ 0.51
LMO4-202ENST00000370544 CDHR4A6H8M9 788 aa18.23■□□□□ 0.51
LMO4-202ENST00000370544 B4DXG7 233 aa18.23■□□□□ 0.51
LMO4-202ENST00000370544 GAAP10253 952 aa18.23■□□□□ 0.51
LMO4-202ENST00000370544 GPX2P18283 190 aa18.23■□□□□ 0.51
LMO4-202ENST00000370544 DLSTP36957 453 aa18.23■□□□□ 0.51
LMO4-202ENST00000370544 EFNA3P52797 238 aa18.23■□□□□ 0.51
LMO4-202ENST00000370544 AKR1C8PQ5T2L2 129 aa18.23■□□□□ 0.51
LMO4-202ENST00000370544 TMEM30AQ9NV96 361 aa18.23■□□□□ 0.51
LMO4-202ENST00000370544 CD300AQ9UGN4 299 aa18.23■□□□□ 0.51
LMO4-202ENST00000370544 TMEM72A0PK05 275 aa18.23■□□□□ 0.51
LMO4-202ENST00000370544 MTHFD2P13995 350 aa18.23■□□□□ 0.51
LMO4-202ENST00000370544 HLA-DMAP28067 261 aa18.23■□□□□ 0.51
LMO4-202ENST00000370544 HTR5AP47898 357 aa18.23■□□□□ 0.51
LMO4-202ENST00000370544 RPS25P62851 125 aaKnown RBP18.23■□□□□ 0.51
LMO4-202ENST00000370544 C14orf28Q4W4Y0 310 aa18.23■□□□□ 0.51
LMO4-202ENST00000370544 PYCR3Q53H96 274 aa18.23■□□□□ 0.51
LMO4-202ENST00000370544 TRIM61Q5EBN2 209 aa18.23■□□□□ 0.51
LMO4-202ENST00000370544 TSSK4Q6SA08 328 aa18.23■□□□□ 0.51
LMO4-202ENST00000370544 SLC35D2Q76EJ3 337 aa18.23■□□□□ 0.51
LMO4-202ENST00000370544 MKXQ8IYA7 352 aa18.23■□□□□ 0.51
LMO4-202ENST00000370544 ENTHD1Q8IYW4 607 aa18.23■□□□□ 0.51
LMO4-202ENST00000370544 LYSMD1Q96S90 227 aa18.23■□□□□ 0.51
LMO4-202ENST00000370544 OR5K3A6NET4 321 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 PRRT4C9JH25 899 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 B3GALT4O96024 378 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 RAB40ALP0C0E4 278 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 OR2T7P0C7T2 308 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 CR2P20023 1033 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 NIPAL3Q6P499 406 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 MEX3BQ6ZN04 569 aaKnown RBP18.22■□□□□ 0.51
LMO4-202ENST00000370544 OR2T27Q8NH04 317 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 RAB40AQ8WXH6 277 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 ZDHHC5Q9C0B5 715 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 NAA50Q9GZZ1 169 aaKnown RBP18.22■□□□□ 0.51
LMO4-202ENST00000370544 OLAHQ9NV23 265 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.22■□□□□ 0.51
LMO4-202ENST00000370544 LRIT2A6NDA9 550 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 SEC61A1P61619 476 aaKnown RBP18.22■□□□□ 0.51
LMO4-202ENST00000370544 DPTQ07507 201 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 CAMK2DQ13557 499 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 SLC37A2Q8TED4 501 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 NMNAT3Q96T66 252 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 C1orf198Q9H425 327 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 C6orf106Q9H6K1 298 aaPredicted RBP18.22■□□□□ 0.51
LMO4-202ENST00000370544 LYRM4Q9HD34 91 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 ITPKCQ96DU7 683 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 CTRCQ99895 268 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 ZNF649Q9BS31 505 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 RLIMQ9NVW2 624 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 NME7Q9Y5B8 376 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 TMEM212A6NML5 194 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 PTHP01270 115 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 GIFP27352 417 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 TAS2R19P59542 299 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 FOXK2Q01167 660 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 GK2Q14410 553 aaPredicted RBP18.22■□□□□ 0.51
LMO4-202ENST00000370544 FCRLAQ7L513 359 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 GRAMD2AQ8IUY3 354 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 RSPRY1Q96DX4 576 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 NOX3Q9HBY0 568 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 OBP2BQ9NPH6 170 aa18.22■□□□□ 0.51
LMO4-202ENST00000370544 LOC105369274A0A096LPK9 316 aa18.21■□□□□ 0.51
LMO4-202ENST00000370544 ZNF44P15621 663 aa18.21■□□□□ 0.51
LMO4-202ENST00000370544 CAV3P56539 151 aa18.21■□□□□ 0.51
LMO4-202ENST00000370544 B3GLCTQ6Y288 498 aa18.21■□□□□ 0.51
LMO4-202ENST00000370544 COX15Q7KZN9 410 aa18.21■□□□□ 0.51
LMO4-202ENST00000370544 AAED1Q7RTV5 226 aa18.21■□□□□ 0.51
LMO4-202ENST00000370544 OR4N4Q8N0Y3 316 aa18.21■□□□□ 0.51
LMO4-202ENST00000370544 OR6T1Q8NGN1 323 aa18.21■□□□□ 0.51
LMO4-202ENST00000370544 FNDC9Q8TBE3 224 aa18.21■□□□□ 0.51
LMO4-202ENST00000370544 ZNF775Q96BV0 537 aaPredicted RBP18.21■□□□□ 0.51
LMO4-202ENST00000370544 NIPSNAP1Q9BPW8 284 aa18.21■□□□□ 0.51
LMO4-202ENST00000370544 TRAPPC2LH3BP13 241 aa18.21■□□□□ 0.51
LMO4-202ENST00000370544 SPDEFO95238 335 aa18.21■□□□□ 0.51
LMO4-202ENST00000370544 CXADRP78310 365 aa18.21■□□□□ 0.51
LMO4-202ENST00000370544 LANCL3Q6ZV70 420 aa18.21■□□□□ 0.51
LMO4-202ENST00000370544 SH3BGRL2Q9UJC5 107 aa18.21■□□□□ 0.51
LMO4-202ENST00000370544 PPT2Q9UMR5 302 aa18.21■□□□□ 0.51
LMO4-202ENST00000370544 ZNF749O43361 778 aa18.21■□□□□ 0.51
LMO4-202ENST00000370544 FPR3P25089 353 aa18.21■□□□□ 0.51
LMO4-202ENST00000370544 FGFBP1Q14512 234 aa18.21■□□□□ 0.51
LMO4-202ENST00000370544 PLGLAQ15195 96 aa18.21■□□□□ 0.51
LMO4-202ENST00000370544 EXOSC6Q5RKV6 272 aaKnown RBP18.21■□□□□ 0.51
LMO4-202ENST00000370544 CD163Q86VB7 1156 aa18.21■□□□□ 0.51
LMO4-202ENST00000370544 COMMD7Q86VX2 200 aa18.21■□□□□ 0.51
LMO4-202ENST00000370544 CMIPQ8IY22 773 aa18.21■□□□□ 0.51
LMO4-202ENST00000370544 ANKRD19PQ9H560 264 aa18.21■□□□□ 0.51
LMO4-202ENST00000370544 PLEKHA3Q9HB20 300 aa18.21■□□□□ 0.51
LMO4-202ENST00000370544 A0A1B0GX78 115 aa18.21■□□□□ 0.51
LMO4-202ENST00000370544 GFYI3L273 518 aa18.21■□□□□ 0.51
LMO4-202ENST00000370544 GAPDHSO14556 408 aaPredicted RBP18.21■□□□□ 0.51
LMO4-202ENST00000370544 SIRPAP78324 504 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms