RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 HCFC1P51610 2035 aa13.23□□□□□ -0.29
COL9A1-204ENST00000370496 KPNA4O00629 521 aaPredicted RBP13.22□□□□□ -0.29
COL9A1-204ENST00000370496 AKR7A3O95154 331 aa13.22□□□□□ -0.29
COL9A1-204ENST00000370496 TFF3Q07654 80 aa13.22□□□□□ -0.29
COL9A1-204ENST00000370496 FOXD4Q12950 439 aaPredicted RBP13.22□□□□□ -0.29
COL9A1-204ENST00000370496 PIN1Q13526 163 aaPredicted RBP13.22□□□□□ -0.29
COL9A1-204ENST00000370496 TTC33Q6PID6 262 aaPredicted RBP13.22□□□□□ -0.29
COL9A1-204ENST00000370496 PAQR6Q6TCH4 344 aa13.22□□□□□ -0.29
COL9A1-204ENST00000370496 GDF7Q7Z4P5 450 aa13.22□□□□□ -0.29
COL9A1-204ENST00000370496 BTLAQ7Z6A9 289 aa13.22□□□□□ -0.29
COL9A1-204ENST00000370496 CYP4Z1Q86W10 505 aa13.22□□□□□ -0.29
COL9A1-204ENST00000370496 TUSC5Q8IXB3 177 aa13.22□□□□□ -0.29
COL9A1-204ENST00000370496 MFSD8Q8NHS3 518 aa13.22□□□□□ -0.29
COL9A1-204ENST00000370496 STARD4Q96DR4 205 aa13.22□□□□□ -0.29
COL9A1-204ENST00000370496 PSD2Q9BQI7 771 aa13.22□□□□□ -0.29
COL9A1-204ENST00000370496 THTPAQ9BU02 230 aa13.22□□□□□ -0.29
COL9A1-204ENST00000370496 PTDSS2Q9BVG9 487 aa13.22□□□□□ -0.29
COL9A1-204ENST00000370496 OPN3Q9H1Y3 402 aaPredicted RBP13.22□□□□□ -0.29
COL9A1-204ENST00000370496 MUC13Q9H3R2 512 aa13.22□□□□□ -0.29
COL9A1-204ENST00000370496 UTP20O75691 2785 aaKnown RBP13.22□□□□□ -0.29
COL9A1-204ENST00000370496 ZNF814B7Z6K7 855 aa13.21□□□□□ -0.29
COL9A1-204ENST00000370496 C19orf84I3L1E1 186 aa13.21□□□□□ -0.29
COL9A1-204ENST00000370496 MSTNO14793 375 aa13.21□□□□□ -0.29
COL9A1-204ENST00000370496 OR2T1O43869 369 aa13.21□□□□□ -0.29
COL9A1-204ENST00000370496 YES1P07947 543 aa13.21□□□□□ -0.29
COL9A1-204ENST00000370496 THRBP10828 461 aa13.21□□□□□ -0.29
COL9A1-204ENST00000370496 ATP6V1B2P21281 511 aa13.21□□□□□ -0.29
COL9A1-204ENST00000370496 YAP1P46937 504 aaKnown RBP13.21□□□□□ -0.29
COL9A1-204ENST00000370496 CYP2R1Q6VVX0 501 aa13.21□□□□□ -0.29
COL9A1-204ENST00000370496 WDR88Q6ZMY6 472 aa13.21□□□□□ -0.29
COL9A1-204ENST00000370496 GPAT4Q86UL3 456 aa13.21□□□□□ -0.29
COL9A1-204ENST00000370496 STK32CQ86UX6 486 aa13.21□□□□□ -0.29
COL9A1-204ENST00000370496 FAM86B1Q8N7N1 296 aa13.21□□□□□ -0.29
COL9A1-204ENST00000370496 RNASE6Q93091 150 aaKnown RBP13.21□□□□□ -0.29
COL9A1-204ENST00000370496 TAAR8Q969N4 342 aa13.21□□□□□ -0.29
COL9A1-204ENST00000370496 CLPTM1LQ96KA5 538 aa13.21□□□□□ -0.29
COL9A1-204ENST00000370496 ZNF300Q96RE9 604 aaPredicted RBP13.21□□□□□ -0.29
COL9A1-204ENST00000370496 FNDC11Q9BVV2 318 aa13.21□□□□□ -0.29
COL9A1-204ENST00000370496 RBM24Q9BX46 236 aaKnown RBP13.21□□□□□ -0.29
COL9A1-204ENST00000370496 AMBRA1Q9C0C7 1298 aa13.21□□□□□ -0.29
COL9A1-204ENST00000370496 BCO1Q9HAY6 547 aa13.21□□□□□ -0.29
COL9A1-204ENST00000370496 NPDC1Q9NQX5 325 aaPredicted RBP13.21□□□□□ -0.29
COL9A1-204ENST00000370496 ACTR3BQ9P1U1 418 aa13.21□□□□□ -0.29
COL9A1-204ENST00000370496 RIMS3Q9UJD0 308 aa13.21□□□□□ -0.29
COL9A1-204ENST00000370496 AQP7P3A6NL99 342 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 FTCDNL1E5RQL4 147 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 RAMP1O60894 148 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 LYPD3O95274 346 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 THY1P04216 161 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 CD8BP10966 210 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 COX6B1P14854 86 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 CBLP22681 906 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 COL8A1P27658 744 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 H3F3AP84243 136 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 IL1RL1Q01638 556 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 ST3GAL3Q11203 375 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 BNIP1Q12981 228 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 MFSD13AQ14CX5 517 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 FBXL19-AS1Q494R0 122 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 MTX3Q5HYI7 312 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 CCDC103Q8IW40 242 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 OFCC1Q8IZS5 231 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 TMEM99Q8N816 258 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 MCUR1Q96AQ8 359 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 BTBD10Q9BSF8 475 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 ASPNQ9BXN1 380 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 SLC19A3Q9BZV2 496 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 TRIM15Q9C019 465 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 GALNT8Q9NY28 637 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 JKAMPQ9P055 326 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 FOXD3Q9UJU5 478 aaPredicted RBP13.2□□□□□ -0.3
COL9A1-204ENST00000370496 A4GNTQ9UNA3 340 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 FAM32AQ9Y421 112 aaKnown RBP13.2□□□□□ -0.3
COL9A1-204ENST00000370496 HECTD1Q9ULT8 2610 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 IGKV3D-15A0A087WSY6 115 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 ZNF716A6NP11 495 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 ZNF724A8MTY0 619 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 J3KTA2 159 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 hCG_2039718K7EN88 272 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 M0R082 166 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 GPR171O14626 319 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 DNAJC8O75937 253 aaPredicted RBP13.2□□□□□ -0.3
COL9A1-204ENST00000370496 ATP5HO75947 161 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 NQO1P15559 274 aaKnown RBP13.2□□□□□ -0.3
COL9A1-204ENST00000370496 GRPRP30550 384 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 RBM34P42696 430 aaKnown RBP13.2□□□□□ -0.3
COL9A1-204ENST00000370496 RASSF2P50749 326 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 SLC16A1P53985 500 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 CBX1P83916 185 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 PDK3Q15120 406 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 EXOC3L2Q2M3D2 409 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 TMEM225Q6GV28 225 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 LCN8Q6JVE9 175 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 MEX3BQ6ZN04 569 aaKnown RBP13.2□□□□□ -0.3
COL9A1-204ENST00000370496 GALNT5Q7Z7M9 940 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 DHFR2Q86XF0 187 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 ZNF417Q8TAU3 575 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 TMEM255BQ8WV15 326 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 ZNF775Q96BV0 537 aaPredicted RBP13.2□□□□□ -0.3
COL9A1-204ENST00000370496 SLC7A6OSQ96CW6 309 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms