RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 ADOQ96SZ5 270 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 TUBA1CQ9BQE3 449 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 POLDIP3Q9BY77 421 aaKnown RBP7.97□□□□□ -1.13
SNX27-201ENST00000368838 HES7Q9BYE0 225 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 MRPS26Q9BYN8 205 aaKnown RBP7.97□□□□□ -1.13
SNX27-201ENST00000368838 DEFB126Q9BYW3 111 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 SH2D2AQ9NP31 389 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 KLHL1Q9NR64 748 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 MRPS18AQ9NVS2 196 aaKnown RBP7.97□□□□□ -1.13
SNX27-201ENST00000368838 FLRT3Q9NZU0 649 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 CNIH4Q9P003 139 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 MED31Q9Y3C7 131 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 CDH10Q9Y6N8 788 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 INTS1Q8N201 2190 aaKnown RBP7.96□□□□□ -1.13
SNX27-201ENST00000368838 ANKRD17O75179 2603 aaKnown RBP7.96□□□□□ -1.14
SNX27-201ENST00000368838 TRAV17A0A0B4J275 112 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 SMIM31A0A1B0GVY4 71 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 CPSF4LA6NMK7 179 aaKnown RBP7.96□□□□□ -1.14
SNX27-201ENST00000368838 M0R3G1 203 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 CCL21O00585 134 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 PRKNO60260 465 aaPredicted RBP7.96□□□□□ -1.14
SNX27-201ENST00000368838 MITFO75030 526 aaPredicted RBP7.96□□□□□ -1.14
SNX27-201ENST00000368838 ICOSLGO75144 302 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 NPIPB7O75200 414 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 PTP4A3O75365 173 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 RCBTB2O95199 551 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 NTN1O95631 604 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 ANGPTL1O95841 491 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 STSP08842 583 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 LINGO3P0C6S8 592 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 SMIM18P0DKX4 95 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 PIPP12273 146 aaPredicted RBP7.96□□□□□ -1.14
SNX27-201ENST00000368838 JUNBP17275 347 aaPredicted RBP7.96□□□□□ -1.14
SNX27-201ENST00000368838 FUT4P22083 530 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 EPHA2P29317 976 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 POLR2IP36954 125 aaKnown RBP7.96□□□□□ -1.14
SNX27-201ENST00000368838 RPL5P46777 297 aaKnown RBP7.96□□□□□ -1.14
SNX27-201ENST00000368838 CLK1P49759 484 aaKnown RBP7.96□□□□□ -1.14
SNX27-201ENST00000368838 MLF1P58340 268 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 SLC35A2P78381 396 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 MVKQ03426 396 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 CD226Q15762 336 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 BTBD16Q32M84 506 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 ALG10BQ5I7T1 473 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 SAMD5Q5TGI4 173 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 ABHD17BQ5VST6 288 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 ZNF324BQ6AW86 544 aaPredicted RBP7.96□□□□□ -1.14
SNX27-201ENST00000368838 LAIR2Q6ISS4 152 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 TTC33Q6PID6 262 aaPredicted RBP7.96□□□□□ -1.14
SNX27-201ENST00000368838 CCDC71Q8IV32 467 aaPredicted RBP7.96□□□□□ -1.14
SNX27-201ENST00000368838 NKAIN4Q8IVV8 208 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 MCEMP1Q8IX19 187 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 CDK20Q8IZL9 346 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 DOK4Q8TEW6 326 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 PAQR8Q8TEZ7 354 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 TMEM234Q8WY98 164 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 EFHD2Q96C19 240 aaPredicted RBP7.96□□□□□ -1.14
SNX27-201ENST00000368838 Q96MT0 163 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 GAL3ST4Q96RP7 486 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 RASL10BQ96S79 203 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 GPX7Q96SL4 187 aaPredicted RBP7.96□□□□□ -1.14
SNX27-201ENST00000368838 TEX12Q9BXU0 123 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 TBL1XR1Q9BZK7 514 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 FAM192AQ9GZU8 254 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 FN3KQ9H479 309 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 FKBP14Q9NWM8 211 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 CNOT2Q9NZN8 540 aaKnown RBP7.96□□□□□ -1.14
SNX27-201ENST00000368838 RHCGQ9UBD6 479 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 SLC7A7Q9UM01 511 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 TPRKBQ9Y3C4 175 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 MRPS18CQ9Y3D5 142 aaKnown RBP7.96□□□□□ -1.14
SNX27-201ENST00000368838 FBN2P35556 2912 aa7.96□□□□□ -1.14
SNX27-201ENST00000368838 CSMD2Q7Z408 3487 aa7.95□□□□□ -1.14
SNX27-201ENST00000368838 NCKAP5O14513 1909 aa7.95□□□□□ -1.14
SNX27-201ENST00000368838 TACC2O95359 2948 aa7.95□□□□□ -1.14
SNX27-201ENST00000368838 PHF3Q92576 2039 aaKnown RBP7.95□□□□□ -1.14
SNX27-201ENST00000368838 NPIPA5A0A0B4J1W7 369 aa7.95□□□□□ -1.14
SNX27-201ENST00000368838 A0A1B0GUH1 482 aa7.95□□□□□ -1.14
SNX27-201ENST00000368838 OR5H15A6NDH6 313 aa7.95□□□□□ -1.14
SNX27-201ENST00000368838 NPIPA7E9PJI5 369 aa7.95□□□□□ -1.14
SNX27-201ENST00000368838 ARPC3O15145 178 aa7.95□□□□□ -1.14
SNX27-201ENST00000368838 ZNF208O43345 1280 aa7.95□□□□□ -1.14
SNX27-201ENST00000368838 FRS3O43559 492 aa7.95□□□□□ -1.14
SNX27-201ENST00000368838 IDH3BO43837 385 aa7.95□□□□□ -1.14
SNX27-201ENST00000368838 ZNF354AO60765 605 aaPredicted RBP7.95□□□□□ -1.14
SNX27-201ENST00000368838 WBP4O75554 376 aaKnown RBP7.95□□□□□ -1.14
SNX27-201ENST00000368838 SNX4O95219 450 aa7.95□□□□□ -1.14
SNX27-201ENST00000368838 CLPTM1O96005 669 aa7.95□□□□□ -1.14
SNX27-201ENST00000368838 MT-ATP6P00846 226 aa7.95□□□□□ -1.14
SNX27-201ENST00000368838 HMGN1P05114 100 aa7.95□□□□□ -1.14
SNX27-201ENST00000368838 TFAP2AP05549 437 aa7.95□□□□□ -1.14
SNX27-201ENST00000368838 NPIPA8P0DM63 369 aa7.95□□□□□ -1.14
SNX27-201ENST00000368838 PTGDSP41222 190 aa7.95□□□□□ -1.14
SNX27-201ENST00000368838 SLC15A1P46059 708 aa7.95□□□□□ -1.14
SNX27-201ENST00000368838 ALDH3B2P48448 385 aa7.95□□□□□ -1.14
SNX27-201ENST00000368838 SMSP52788 366 aa7.95□□□□□ -1.14
SNX27-201ENST00000368838 RPS4XP62701 263 aaKnown RBP7.95□□□□□ -1.14
SNX27-201ENST00000368838 ZNF117Q03924 483 aa7.95□□□□□ -1.14
SNX27-201ENST00000368838 CBFBQ13951 182 aa7.95□□□□□ -1.14
SNX27-201ENST00000368838 LAPTM4AQ15012 233 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms