RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 FOXG1P55316 489 aaPredicted RBP16.72■□□□□ 0.27
CKS1B-203ENST00000368439 ACKR1Q16570 336 aa16.72■□□□□ 0.27
CKS1B-203ENST00000368439 DUSP7Q16829 419 aa16.72■□□□□ 0.27
CKS1B-203ENST00000368439 ZNF433Q8N7K0 673 aaPredicted RBP16.72■□□□□ 0.27
CKS1B-203ENST00000368439 BHLHE22Q8NFJ8 381 aaPredicted RBP16.72■□□□□ 0.27
CKS1B-203ENST00000368439 GPR32P1Q8NGA4 272 aa16.72■□□□□ 0.27
CKS1B-203ENST00000368439 MFSD8Q8NHS3 518 aa16.72■□□□□ 0.27
CKS1B-203ENST00000368439 TMEM45BQ96B21 275 aa16.72■□□□□ 0.27
CKS1B-203ENST00000368439 LRRC58Q96CX6 371 aa16.72■□□□□ 0.27
CKS1B-203ENST00000368439 KTI12Q96EK9 354 aaPredicted RBP16.72■□□□□ 0.27
CKS1B-203ENST00000368439 PLPPR2Q96GM1 343 aa16.72■□□□□ 0.27
CKS1B-203ENST00000368439 USB1Q9BQ65 265 aaKnown RBP16.72■□□□□ 0.27
CKS1B-203ENST00000368439 SF3B5Q9BWJ5 86 aaKnown RBP16.72■□□□□ 0.27
CKS1B-203ENST00000368439 TRIM2Q9C040 744 aa16.72■□□□□ 0.27
CKS1B-203ENST00000368439 MALT1Q9UDY8 824 aa16.72■□□□□ 0.27
CKS1B-203ENST00000368439 TESQ9UGI8 421 aaKnown RBP16.72■□□□□ 0.27
CKS1B-203ENST00000368439 SLC9A8Q9Y2E8 581 aa16.72■□□□□ 0.27
CKS1B-203ENST00000368439 CADP27708 2225 aa16.72■□□□□ 0.27
CKS1B-203ENST00000368439 M0QX08 132 aa16.71■□□□□ 0.27
CKS1B-203ENST00000368439 PCGF2P35227 344 aa16.71■□□□□ 0.27
CKS1B-203ENST00000368439 CRYBA2P53672 197 aa16.71■□□□□ 0.27
CKS1B-203ENST00000368439 NR1H2P55055 460 aa16.71■□□□□ 0.27
CKS1B-203ENST00000368439 RABL3Q5HYI8 236 aa16.71■□□□□ 0.27
CKS1B-203ENST00000368439 REP15Q6BDI9 236 aa16.71■□□□□ 0.27
CKS1B-203ENST00000368439 CALHM3Q86XJ0 350 aa16.71■□□□□ 0.27
CKS1B-203ENST00000368439 SMYD1Q8NB12 490 aa16.71■□□□□ 0.27
CKS1B-203ENST00000368439 OR9K2Q8NGE7 335 aa16.71■□□□□ 0.27
CKS1B-203ENST00000368439 OR52E4Q8NGH9 312 aa16.71■□□□□ 0.27
CKS1B-203ENST00000368439 ZNF385AQ96PM9 386 aaKnown RBP16.71■□□□□ 0.27
CKS1B-203ENST00000368439 ARHGDIGQ99819 225 aa16.71■□□□□ 0.27
CKS1B-203ENST00000368439 TAPBPLQ9BX59 468 aa16.71■□□□□ 0.27
CKS1B-203ENST00000368439 PIF1Q9H611 641 aa16.71■□□□□ 0.27
CKS1B-203ENST00000368439 ADPRHL2Q9NX46 363 aa16.71■□□□□ 0.27
CKS1B-203ENST00000368439 A0A0B4J2E0 115 aa16.7■□□□□ 0.26
CKS1B-203ENST00000368439 A0A1B0GX12 115 aa16.7■□□□□ 0.26
CKS1B-203ENST00000368439 ELOA3DA6NLF2 546 aaPredicted RBP16.7■□□□□ 0.26
CKS1B-203ENST00000368439 BBIP1A8MTZ0 92 aa16.7■□□□□ 0.26
CKS1B-203ENST00000368439 AHSA1O95433 338 aa16.7■□□□□ 0.26
CKS1B-203ENST00000368439 LGI1O95970 557 aa16.7■□□□□ 0.26
CKS1B-203ENST00000368439 OPN1SWP03999 348 aa16.7■□□□□ 0.26
CKS1B-203ENST00000368439 RPS5P46782 204 aaKnown RBP16.7■□□□□ 0.26
CKS1B-203ENST00000368439 RGS8P57771 180 aaPredicted RBP16.7■□□□□ 0.26
CKS1B-203ENST00000368439 CYLC2Q14093 348 aaPredicted RBP16.7■□□□□ 0.26
CKS1B-203ENST00000368439 OR1Q1Q15612 314 aa16.7■□□□□ 0.26
CKS1B-203ENST00000368439 VMACQ2NL98 169 aa16.7■□□□□ 0.26
CKS1B-203ENST00000368439 ELOA3BQ3SY89 546 aa16.7■□□□□ 0.26
CKS1B-203ENST00000368439 NCMAPQ5T1S8 102 aa16.7■□□□□ 0.26
CKS1B-203ENST00000368439 FAM91A1Q658Y4 838 aa16.7■□□□□ 0.26
CKS1B-203ENST00000368439 ZNF704Q6ZNC4 412 aaPredicted RBP16.7■□□□□ 0.26
CKS1B-203ENST00000368439 SNX32Q86XE0 403 aa16.7■□□□□ 0.26
CKS1B-203ENST00000368439 SLC30A8Q8IWU4 369 aa16.7■□□□□ 0.26
CKS1B-203ENST00000368439 ELOA3Q8NG57 546 aa16.7■□□□□ 0.26
CKS1B-203ENST00000368439 OR8J3Q8NGG0 315 aa16.7■□□□□ 0.26
CKS1B-203ENST00000368439 DNAJA4Q8WW22 397 aaPredicted RBP16.7■□□□□ 0.26
CKS1B-203ENST00000368439 IGFBPL1Q8WX77 278 aa16.7■□□□□ 0.26
CKS1B-203ENST00000368439 SLC38A4Q969I6 547 aa16.7■□□□□ 0.26
CKS1B-203ENST00000368439 EVA1AQ9H8M9 152 aa16.7■□□□□ 0.26
CKS1B-203ENST00000368439 UBTD1Q9HAC8 227 aa16.7■□□□□ 0.26
CKS1B-203ENST00000368439 BEX4Q9NWD9 120 aaPredicted RBP16.7■□□□□ 0.26
CKS1B-203ENST00000368439 RPS6KB2Q9UBS0 482 aa16.7■□□□□ 0.26
CKS1B-203ENST00000368439 LOC100653049A0A140TA62 436 aa16.69■□□□□ 0.26
CKS1B-203ENST00000368439 MRASO14807 208 aa16.69■□□□□ 0.26
CKS1B-203ENST00000368439 KRT34O76011 436 aa16.69■□□□□ 0.26
CKS1B-203ENST00000368439 NPPAP01160 153 aa16.69■□□□□ 0.26
CKS1B-203ENST00000368439 C8BP07358 591 aa16.69■□□□□ 0.26
CKS1B-203ENST00000368439 ITGA5P08648 1049 aa16.69■□□□□ 0.26
CKS1B-203ENST00000368439 PNMTP11086 282 aa16.69■□□□□ 0.26
CKS1B-203ENST00000368439 GGT1P19440 569 aa16.69■□□□□ 0.26
CKS1B-203ENST00000368439 CD247P20963 164 aa16.69■□□□□ 0.26
CKS1B-203ENST00000368439 NPTX1Q15818 432 aa16.69■□□□□ 0.26
CKS1B-203ENST00000368439 NRF1Q16656 503 aa16.69■□□□□ 0.26
CKS1B-203ENST00000368439 ALG10BQ5I7T1 473 aa16.69■□□□□ 0.26
CKS1B-203ENST00000368439 TIMM23BQ5SRD1 257 aa16.69■□□□□ 0.26
CKS1B-203ENST00000368439 TSPO2Q5TGU0 170 aa16.69■□□□□ 0.26
CKS1B-203ENST00000368439 ULK3Q6PHR2 472 aa16.69■□□□□ 0.26
CKS1B-203ENST00000368439 CASP12Q6UXS9 341 aa16.69■□□□□ 0.26
CKS1B-203ENST00000368439 CCDC80Q76M96 950 aa16.69■□□□□ 0.26
CKS1B-203ENST00000368439 KRTAP1-3Q8IUG1 177 aa16.69■□□□□ 0.26
CKS1B-203ENST00000368439 UBE2J2Q8N2K1 259 aa16.69■□□□□ 0.26
CKS1B-203ENST00000368439 OR4D11Q8NGI4 311 aa16.69■□□□□ 0.26
CKS1B-203ENST00000368439 LILRB1Q8NHL6 650 aaPredicted RBP16.69■□□□□ 0.26
CKS1B-203ENST00000368439 TAAR8Q969N4 342 aa16.69■□□□□ 0.26
CKS1B-203ENST00000368439 TAMM41Q96BW9 452 aa16.69■□□□□ 0.26
CKS1B-203ENST00000368439 PIP5K1AQ99755 562 aa16.69■□□□□ 0.26
CKS1B-203ENST00000368439 TMUB1Q9BVT8 246 aa16.69■□□□□ 0.26
CKS1B-203ENST00000368439 SLC7A10Q9NS82 523 aa16.69■□□□□ 0.26
CKS1B-203ENST00000368439 PARPBPQ9NWS1 579 aa16.69■□□□□ 0.26
CKS1B-203ENST00000368439 ASB6Q9NWX5 421 aa16.69■□□□□ 0.26
CKS1B-203ENST00000368439 SEC14L4Q9UDX3 406 aa16.69■□□□□ 0.26
CKS1B-203ENST00000368439 A0A087WUJ7 227 aa16.68■□□□□ 0.26
CKS1B-203ENST00000368439 OR5H1A6NKK0 313 aa16.68■□□□□ 0.26
CKS1B-203ENST00000368439 M0R3H8 397 aa16.68■□□□□ 0.26
CKS1B-203ENST00000368439 SLC22A2O15244 555 aa16.68■□□□□ 0.26
CKS1B-203ENST00000368439 VAMP5O95183 116 aa16.68■□□□□ 0.26
CKS1B-203ENST00000368439 FAPQ12884 760 aa16.68■□□□□ 0.26
CKS1B-203ENST00000368439 MAPRE2Q15555 327 aa16.68■□□□□ 0.26
CKS1B-203ENST00000368439 TMEM225Q6GV28 225 aa16.68■□□□□ 0.26
CKS1B-203ENST00000368439 ALKBH2Q6NS38 261 aa16.68■□□□□ 0.26
CKS1B-203ENST00000368439 C5orf46Q6UWT4 87 aa16.68■□□□□ 0.26
CKS1B-203ENST00000368439 C20orf204Q6ZNR8 217 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms