RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 HNRNPCL3B7ZW38 293 aa13.02□□□□□ -0.33
CTSD-202ENST00000367196 E7EQL1 145 aa13.02□□□□□ -0.33
CTSD-202ENST00000367196 UBDO15205 165 aa13.02□□□□□ -0.33
CTSD-202ENST00000367196 CD5LO43866 347 aa13.02□□□□□ -0.33
CTSD-202ENST00000367196 SSX4O60224 188 aa13.02□□□□□ -0.33
CTSD-202ENST00000367196 ZNF500O60304 480 aaPredicted RBP13.02□□□□□ -0.33
CTSD-202ENST00000367196 HNRNPCL1O60812 293 aaKnown RBP13.02□□□□□ -0.33
CTSD-202ENST00000367196 KRT33AO76009 404 aa13.02□□□□□ -0.33
CTSD-202ENST00000367196 CSF3P09919 207 aa13.02□□□□□ -0.33
CTSD-202ENST00000367196 HNRNPCL4P0DMR1 293 aa13.02□□□□□ -0.33
CTSD-202ENST00000367196 FABP6P51161 128 aa13.02□□□□□ -0.33
CTSD-202ENST00000367196 WDR4P57081 412 aaKnown RBP13.02□□□□□ -0.33
CTSD-202ENST00000367196 CEACAM7Q14002 265 aa13.02□□□□□ -0.33
CTSD-202ENST00000367196 C6orf10Q5SRN2 563 aa13.02□□□□□ -0.33
CTSD-202ENST00000367196 TSPO2Q5TGU0 170 aa13.02□□□□□ -0.33
CTSD-202ENST00000367196 TMEM225Q6GV28 225 aa13.02□□□□□ -0.33
CTSD-202ENST00000367196 C11orf71Q6IPW1 123 aa13.02□□□□□ -0.33
CTSD-202ENST00000367196 AAED1Q7RTV5 226 aa13.02□□□□□ -0.33
CTSD-202ENST00000367196 GPAT4Q86UL3 456 aa13.02□□□□□ -0.33
CTSD-202ENST00000367196 MIER2Q8N344 545 aa13.02□□□□□ -0.33
CTSD-202ENST00000367196 SLC35B4Q969S0 331 aa13.02□□□□□ -0.33
CTSD-202ENST00000367196 SDR39U1Q9NRG7 319 aaPredicted RBP13.02□□□□□ -0.33
CTSD-202ENST00000367196 SLC7A10Q9NS82 523 aa13.02□□□□□ -0.33
CTSD-202ENST00000367196 GDF2Q9UK05 429 aaPredicted RBP13.02□□□□□ -0.33
CTSD-202ENST00000367196 HEATR1Q9H583 2144 aaKnown RBP13.01□□□□□ -0.33
CTSD-202ENST00000367196 A0A1W2PR80 420 aa13.01□□□□□ -0.33
CTSD-202ENST00000367196 ZC3H12DA2A288 527 aaKnown RBP13.01□□□□□ -0.33
CTSD-202ENST00000367196 KIAA1324LA8MWY0 1029 aaPredicted RBP13.01□□□□□ -0.33
CTSD-202ENST00000367196 ZNF587BE7ETH6 402 aa13.01□□□□□ -0.33
CTSD-202ENST00000367196 H7C417 338 aa13.01□□□□□ -0.33
CTSD-202ENST00000367196 ERLIN1O75477 346 aa13.01□□□□□ -0.33
CTSD-202ENST00000367196 AKR7A3O95154 331 aa13.01□□□□□ -0.33
CTSD-202ENST00000367196 IFNA2P01563 188 aa13.01□□□□□ -0.33
CTSD-202ENST00000367196 C1QCP02747 245 aa13.01□□□□□ -0.33
CTSD-202ENST00000367196 GKN3PP0CG01 181 aa13.01□□□□□ -0.33
CTSD-202ENST00000367196 ETFAP13804 333 aa13.01□□□□□ -0.33
CTSD-202ENST00000367196 SLC25A16P16260 332 aa13.01□□□□□ -0.33
CTSD-202ENST00000367196 GTF2E2P29084 291 aaKnown RBP13.01□□□□□ -0.33
CTSD-202ENST00000367196 NTF4P34130 210 aa13.01□□□□□ -0.33
CTSD-202ENST00000367196 STX1BP61266 288 aa13.01□□□□□ -0.33
CTSD-202ENST00000367196 KRTAP1-1Q07627 177 aa13.01□□□□□ -0.33
CTSD-202ENST00000367196 SPOCK1Q08629 439 aa13.01□□□□□ -0.33
CTSD-202ENST00000367196 FADDQ13158 208 aa13.01□□□□□ -0.33
CTSD-202ENST00000367196 C9orf135Q5VTT2 229 aa13.01□□□□□ -0.33
CTSD-202ENST00000367196 PRAMEF8Q5VWM4 474 aa13.01□□□□□ -0.33
CTSD-202ENST00000367196 PRAMEF7Q5VXH5 474 aa13.01□□□□□ -0.33
CTSD-202ENST00000367196 VRK2Q86Y07 508 aa13.01□□□□□ -0.33
CTSD-202ENST00000367196 TMEM99Q8N816 258 aa13.01□□□□□ -0.33
CTSD-202ENST00000367196 MAPK1IP1LQ8NDC0 245 aa13.01□□□□□ -0.33
CTSD-202ENST00000367196 SLC38A5Q8WUX1 472 aa13.01□□□□□ -0.33
CTSD-202ENST00000367196 ZNF317Q96PQ6 595 aaPredicted RBP13.01□□□□□ -0.33
CTSD-202ENST00000367196 KCNS3Q9BQ31 491 aa13.01□□□□□ -0.33
CTSD-202ENST00000367196 SPATA9Q9BWV2 254 aa13.01□□□□□ -0.33
CTSD-202ENST00000367196 RLIMQ9NVW2 624 aa13.01□□□□□ -0.33
CTSD-202ENST00000367196 ADPRHL2Q9NX46 363 aa13.01□□□□□ -0.33
CTSD-202ENST00000367196 RASD1Q9Y272 281 aa13.01□□□□□ -0.33
CTSD-202ENST00000367196 ATP23Q9Y6H3 246 aa13.01□□□□□ -0.33
CTSD-202ENST00000367196 PMF1-BGLAPU3KQ54 211 aa13.01□□□□□ -0.33
CTSD-202ENST00000367196 KLF11O14901 512 aa13□□□□□ -0.33
CTSD-202ENST00000367196 FRS3O43559 492 aa13□□□□□ -0.33
CTSD-202ENST00000367196 NDUFS7O75251 213 aa13□□□□□ -0.33
CTSD-202ENST00000367196 AHSA1O95433 338 aa13□□□□□ -0.33
CTSD-202ENST00000367196 TFPTP0C1Z6 253 aa13□□□□□ -0.33
CTSD-202ENST00000367196 POLR2JP52435 117 aaKnown RBP13□□□□□ -0.33
CTSD-202ENST00000367196 MVDP53602 400 aa13□□□□□ -0.33
CTSD-202ENST00000367196 IRX1P78414 480 aaPredicted RBP13□□□□□ -0.33
CTSD-202ENST00000367196 C1orf140Q5VVS0 124 aa13□□□□□ -0.33
CTSD-202ENST00000367196 WDR31Q8NA23 367 aa13□□□□□ -0.33
CTSD-202ENST00000367196 BBS10Q8TAM1 723 aa13□□□□□ -0.33
CTSD-202ENST00000367196 STK35Q8TDR2 534 aa13□□□□□ -0.33
CTSD-202ENST00000367196 TMEM19Q96HH6 336 aa13□□□□□ -0.33
CTSD-202ENST00000367196 BOD1Q96IK1 185 aa13□□□□□ -0.33
CTSD-202ENST00000367196 TMEM45AQ9NWC5 275 aa13□□□□□ -0.33
CTSD-202ENST00000367196 C5orf58C9J3I9 102 aa12.99□□□□□ -0.33
CTSD-202ENST00000367196 APOBEC3AP31941 199 aaPredicted RBP12.99□□□□□ -0.33
CTSD-202ENST00000367196 ACAA2P42765 397 aaKnown RBP12.99□□□□□ -0.33
CTSD-202ENST00000367196 UBE2NP61088 152 aaKnown RBP12.99□□□□□ -0.33
CTSD-202ENST00000367196 MAGOHP61326 146 aaKnown RBP12.99□□□□□ -0.33
CTSD-202ENST00000367196 MAPK11Q15759 364 aa12.99□□□□□ -0.33
CTSD-202ENST00000367196 SLC9B1Q4ZJI4 515 aa12.99□□□□□ -0.33
CTSD-202ENST00000367196 ZNF311Q5JNZ3 666 aa12.99□□□□□ -0.33
CTSD-202ENST00000367196 C5orf46Q6UWT4 87 aa12.99□□□□□ -0.33
CTSD-202ENST00000367196 B3GLCTQ6Y288 498 aa12.99□□□□□ -0.33
CTSD-202ENST00000367196 ZNF385AQ96PM9 386 aaKnown RBP12.99□□□□□ -0.33
CTSD-202ENST00000367196 YAE1D1Q9NRH1 226 aa12.99□□□□□ -0.33
CTSD-202ENST00000367196 SLC6A13Q9NSD5 602 aa12.99□□□□□ -0.33
CTSD-202ENST00000367196 RPS6KB2Q9UBS0 482 aa12.99□□□□□ -0.33
CTSD-202ENST00000367196 FKBP7Q9Y680 259 aa12.99□□□□□ -0.33
CTSD-202ENST00000367196 ELOA3DA6NLF2 546 aaPredicted RBP12.98□□□□□ -0.33
CTSD-202ENST00000367196 A8MV72 311 aaPredicted RBP12.98□□□□□ -0.33
CTSD-202ENST00000367196 AKAP8O43823 692 aaKnown RBP12.98□□□□□ -0.33
CTSD-202ENST00000367196 CDH2P19022 906 aaPredicted RBP12.98□□□□□ -0.33
CTSD-202ENST00000367196 PTNP21246 168 aa12.98□□□□□ -0.33
CTSD-202ENST00000367196 PPIBP23284 216 aaKnown RBP12.98□□□□□ -0.33
CTSD-202ENST00000367196 FOXG1P55316 489 aaPredicted RBP12.98□□□□□ -0.33
CTSD-202ENST00000367196 SH3BGRP55822 239 aaPredicted RBP12.98□□□□□ -0.33
CTSD-202ENST00000367196 LOXL1Q08397 574 aaPredicted RBP12.98□□□□□ -0.33
CTSD-202ENST00000367196 BNIP2Q12982 314 aa12.98□□□□□ -0.33
CTSD-202ENST00000367196 RGNQ15493 299 aa12.98□□□□□ -0.33
CTSD-202ENST00000367196 ELOA3BQ3SY89 546 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms