RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 MS4A3Q96HJ5 214 aa10.91□□□□□ -0.66
PRKN-206ENST00000366898 CPPED1Q9BRF8 314 aaPredicted RBP10.91□□□□□ -0.66
PRKN-206ENST00000366898 FBXW2Q9UKT8 454 aa10.91□□□□□ -0.66
PRKN-206ENST00000366898 CLEC4EQ9ULY5 219 aa10.91□□□□□ -0.66
PRKN-206ENST00000366898 SPACA6W5XKT8 324 aa10.91□□□□□ -0.66
PRKN-206ENST00000366898 MEIKINA0A087WXM9 373 aa10.91□□□□□ -0.66
PRKN-206ENST00000366898 FAM221BA6H8Z2 402 aa10.91□□□□□ -0.66
PRKN-206ENST00000366898 CXorf65A6NEN9 183 aa10.91□□□□□ -0.66
PRKN-206ENST00000366898 A6NLC8 198 aa10.91□□□□□ -0.66
PRKN-206ENST00000366898 B3GALT4O96024 378 aa10.91□□□□□ -0.66
PRKN-206ENST00000366898 GPR1P46091 355 aa10.91□□□□□ -0.66
PRKN-206ENST00000366898 SELENOPP49908 381 aa10.91□□□□□ -0.66
PRKN-206ENST00000366898 CYCSP99999 105 aaKnown RBP10.91□□□□□ -0.66
PRKN-206ENST00000366898 MEF2AQ02078 507 aaPredicted RBP10.91□□□□□ -0.66
PRKN-206ENST00000366898 VEZF1Q14119 521 aa10.91□□□□□ -0.66
PRKN-206ENST00000366898 SLBPQ14493 270 aaKnown RBP eCLIP10.91□□□□□ -0.66
PRKN-206ENST00000366898 ZNF79Q15937 498 aa10.91□□□□□ -0.66
PRKN-206ENST00000366898 NHLRC1Q6VVB1 395 aa10.91□□□□□ -0.66
PRKN-206ENST00000366898 SERPINA11Q86U17 422 aa10.91□□□□□ -0.66
PRKN-206ENST00000366898 RANBP3LQ86VV4 465 aaPredicted RBP10.91□□□□□ -0.66
PRKN-206ENST00000366898 LURAP1LQ8IV03 231 aa10.91□□□□□ -0.66
PRKN-206ENST00000366898 GID4Q8IVV7 300 aa10.91□□□□□ -0.66
PRKN-206ENST00000366898 OR2G2Q8NGZ5 317 aa10.91□□□□□ -0.66
PRKN-206ENST00000366898 SNIP1Q8TAD8 396 aaKnown RBP10.91□□□□□ -0.66
PRKN-206ENST00000366898 SPSB2Q99619 263 aa10.91□□□□□ -0.66
PRKN-206ENST00000366898 CALML5Q9NZT1 146 aa10.91□□□□□ -0.66
PRKN-206ENST00000366898 NEU3Q9UQ49 428 aa10.91□□□□□ -0.66
PRKN-206ENST00000366898 PLXNB2O15031 1838 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 IGLV3-10A0A075B6K4 115 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 TMEM218A2RU14 115 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 ZNF736B4DX44 427 aaPredicted RBP10.9□□□□□ -0.66
PRKN-206ENST00000366898 UMAD1C9J7I0 102 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 MCRIP1C9JLW8 97 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 ANHXE9PGG2 379 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 GRM6O15303 877 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 ADAM11O75078 769 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 STATHP02808 62 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 GAAP10253 952 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 ANK1P16157 1881 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 ZNF30P17039 623 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 SDC1P18827 310 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 FGF7P21781 194 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 ACTBP60709 375 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 ACTG1P63261 375 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 DEFB103AP81534 67 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 GAB1Q13480 694 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 IRF3Q14653 427 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 GUCA2BQ16661 112 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 YOD1Q5VVQ6 348 aaPredicted RBP10.9□□□□□ -0.66
PRKN-206ENST00000366898 TMEM220Q6QAJ8 160 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 TMEM25Q86YD3 366 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 SKA3Q8IX90 412 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 NANOGP1Q8N7R0 232 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 NUBPLQ8TB37 319 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 ZCCHC10Q8TBK6 192 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 THAP4Q8WY91 577 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 RSC1A1Q92681 617 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 FOXJ1Q92949 421 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 RAB39BQ96DA2 213 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 SAMD8Q96LT4 415 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 PLCXD1Q9NUJ7 323 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 ZNF780BQ9Y6R6 833 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 TBC1D3BA6NDS4 549 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 MMP7P09237 267 aaPredicted RBP10.9□□□□□ -0.66
PRKN-206ENST00000366898 CCR8P51685 355 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 SLC9B2Q86UD5 537 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 TMEM19Q96HH6 336 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 JSRP1Q96MG2 331 aaPredicted RBP10.9□□□□□ -0.66
PRKN-206ENST00000366898 CDCA4Q9BXL8 241 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 POPDC3Q9HBV1 291 aa10.9□□□□□ -0.66
PRKN-206ENST00000366898 TRDV1A0A1B0GX56 115 aa10.9□□□□□ -0.67
PRKN-206ENST00000366898 GLOD5A6NK44 160 aa10.9□□□□□ -0.67
PRKN-206ENST00000366898 MCIDASD6RGH6 385 aa10.9□□□□□ -0.67
PRKN-206ENST00000366898 TMEM189-UBE2V1I3L0A0 370 aa10.9□□□□□ -0.67
PRKN-206ENST00000366898 LEFTY2O00292 366 aa10.9□□□□□ -0.67
PRKN-206ENST00000366898 POP4O95707 220 aaKnown RBP10.9□□□□□ -0.67
PRKN-206ENST00000366898 IGF2P01344 180 aa10.9□□□□□ -0.67
PRKN-206ENST00000366898 EIF4EP06730 217 aaKnown RBP10.9□□□□□ -0.67
PRKN-206ENST00000366898 NTHL1P78549 312 aa10.9□□□□□ -0.67
PRKN-206ENST00000366898 ZNF239Q16600 458 aaKnown RBP10.9□□□□□ -0.67
PRKN-206ENST00000366898 Q5PR19 223 aa10.9□□□□□ -0.67
PRKN-206ENST00000366898 LY6G5CQ5SRR4 150 aa10.9□□□□□ -0.67
PRKN-206ENST00000366898 FAM83HQ6ZRV2 1179 aaPredicted RBP10.9□□□□□ -0.67
PRKN-206ENST00000366898 FAM213BQ8TBF2 198 aa10.9□□□□□ -0.67
PRKN-206ENST00000366898 GLYATL2Q8WU03 294 aa10.9□□□□□ -0.67
PRKN-206ENST00000366898 C4orf36Q96KX1 117 aa10.9□□□□□ -0.67
PRKN-206ENST00000366898 EGLN3Q9H6Z9 239 aa10.9□□□□□ -0.67
PRKN-206ENST00000366898 APMAPQ9HDC9 416 aa10.9□□□□□ -0.67
PRKN-206ENST00000366898 ZDHHC3Q9NYG2 299 aa10.9□□□□□ -0.67
PRKN-206ENST00000366898 GRXCR2A6NFK2 248 aa10.89□□□□□ -0.67
PRKN-206ENST00000366898 OR5H14A6NHG9 310 aa10.89□□□□□ -0.67
PRKN-206ENST00000366898 ACOD1A6NK06 481 aa10.89□□□□□ -0.67
PRKN-206ENST00000366898 SLC33A1O00400 549 aaPredicted RBP10.89□□□□□ -0.67
PRKN-206ENST00000366898 HRO43593 1189 aa10.89□□□□□ -0.67
PRKN-206ENST00000366898 AKR7A3O95154 331 aa10.89□□□□□ -0.67
PRKN-206ENST00000366898 IL33O95760 270 aa10.89□□□□□ -0.67
PRKN-206ENST00000366898 NMBP08949 121 aa10.89□□□□□ -0.67
PRKN-206ENST00000366898 NCBP2P52298 156 aaKnown RBP eCLIP10.89□□□□□ -0.67
PRKN-206ENST00000366898 AFMIDQ63HM1 303 aa10.89□□□□□ -0.67
PRKN-206ENST00000366898 TPGS2Q68CL5 300 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms