RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 SYS1Q8N2H4 156 aa17.54■□□□□ 0.4
CMTM3-201ENST00000361909 OR52I2Q8NH67 350 aa17.54■□□□□ 0.4
CMTM3-201ENST00000361909 NSMAFQ92636 917 aa17.54■□□□□ 0.4
CMTM3-201ENST00000361909 RAD51AP1Q96B01 352 aa17.54■□□□□ 0.4
CMTM3-201ENST00000361909 MCHR1Q99705 422 aa17.54■□□□□ 0.4
CMTM3-201ENST00000361909 USB1Q9BQ65 265 aaKnown RBP17.54■□□□□ 0.4
CMTM3-201ENST00000361909 LHX9Q9NQ69 397 aa17.54■□□□□ 0.4
CMTM3-201ENST00000361909 EXOSC3Q9NQT5 275 aaKnown RBP17.54■□□□□ 0.4
CMTM3-201ENST00000361909 NTMQ9P121 344 aa17.54■□□□□ 0.4
CMTM3-201ENST00000361909 A0A1W2PQU0 124 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 CDHR4A6H8M9 788 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 J3QLW9 94 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 ACOT7O00154 380 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 FOSL2P15408 326 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 ZNF19P17023 458 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 TRHRP34981 398 aaPredicted RBP17.53■□□□□ 0.4
CMTM3-201ENST00000361909 PRR5P85299 388 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 ZNF85Q03923 595 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 LASP1Q14847 261 aaKnown RBP17.53■□□□□ 0.4
CMTM3-201ENST00000361909 IRF4Q15306 451 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 TMEM92Q6UXU6 159 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 CFAP206Q8IYR0 622 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 RNF113BQ8IZP6 322 aaKnown RBP17.53■□□□□ 0.4
CMTM3-201ENST00000361909 BBS4Q96RK4 519 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 PCBD2Q9H0N5 130 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 ADGRL4Q9HBW9 690 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 ZNF304Q9HCX3 659 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 MBNL1Q9NR56 388 aaKnown RBP17.53■□□□□ 0.4
CMTM3-201ENST00000361909 TAS2R10Q9NYW0 307 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 ACTR10Q9NZ32 417 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 TBC1D3DA0A087WVF3 549 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 TBC1D3IA0A087WXS9 549 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 TBC1D3EA0A087X179 549 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 TBC1D3KA0A087X1G2 549 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 PQLC2LA1A4F0 135 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 TBC1D3FA6NER0 549 aaPredicted RBP17.53■□□□□ 0.4
CMTM3-201ENST00000361909 TBC1D3LB9A6J9 549 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 F5H5P2 479 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 POP7O75817 140 aaKnown RBP17.53■□□□□ 0.4
CMTM3-201ENST00000361909 RCBTB2O95199 551 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 PLATP00750 562 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 HMGN2P05204 90 aaKnown RBP17.53■□□□□ 0.4
CMTM3-201ENST00000361909 TBC1D3HP0C7X1 549 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 ACVR1BP36896 505 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 ARHGAP19Q14CB8 494 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 TSC22D1Q15714 1073 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 MLF2Q15773 248 aaPredicted RBP17.53■□□□□ 0.4
CMTM3-201ENST00000361909 TMEM255AQ5JRV8 349 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 TBC1D3GQ6DHY5 549 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 TBC1D3CQ6IPX1 549 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 UQCC3Q6UW78 93 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 ESPNLQ6ZVH7 1005 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 C11orf96Q7Z7L8 435 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 TBC1D3Q8IZP1 549 aaPredicted RBP17.53■□□□□ 0.4
CMTM3-201ENST00000361909 HS6ST2Q96MM7 605 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 CD180Q99467 661 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 TEAD3Q99594 435 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 SLC19A3Q9BZV2 496 aa17.53■□□□□ 0.4
CMTM3-201ENST00000361909 PHPT1Q9NRX4 125 aaPredicted RBP17.53■□□□□ 0.4
CMTM3-201ENST00000361909 ZGLP1P0C6A0 271 aa17.52■□□□□ 0.4
CMTM3-201ENST00000361909 HSD17B2P37059 387 aa17.52■□□□□ 0.4
CMTM3-201ENST00000361909 CDK5R1Q15078 307 aa17.52■□□□□ 0.4
CMTM3-201ENST00000361909 LINC00303Q3SY05 128 aa17.52■□□□□ 0.4
CMTM3-201ENST00000361909 FAM199XQ6PEV8 388 aaPredicted RBP17.52■□□□□ 0.4
CMTM3-201ENST00000361909 ATRAIDQ6UW56 229 aa17.52■□□□□ 0.4
CMTM3-201ENST00000361909 LRRTM4Q86VH4 590 aa17.52■□□□□ 0.4
CMTM3-201ENST00000361909 CACYBPQ9HB71 228 aaKnown RBP17.52■□□□□ 0.4
CMTM3-201ENST00000361909 IL20RAQ9UHF4 553 aa17.52■□□□□ 0.4
CMTM3-201ENST00000361909 SLC35A3Q9Y2D2 325 aa17.52■□□□□ 0.4
CMTM3-201ENST00000361909 GPR55Q9Y2T6 319 aaPredicted RBP17.52■□□□□ 0.4
CMTM3-201ENST00000361909 A0A0A6YYD5 115 aa17.52■□□□□ 0.39
CMTM3-201ENST00000361909 PIP5K1CO60331 668 aa17.52■□□□□ 0.39
CMTM3-201ENST00000361909 ADAM11O75078 769 aa17.52■□□□□ 0.39
CMTM3-201ENST00000361909 ERGP11308 486 aa17.52■□□□□ 0.39
CMTM3-201ENST00000361909 MPGP29372 298 aa17.52■□□□□ 0.39
CMTM3-201ENST00000361909 GDI2P50395 445 aaKnown RBP17.52■□□□□ 0.39
CMTM3-201ENST00000361909 OLIG3Q7RTU3 272 aa17.52■□□□□ 0.39
CMTM3-201ENST00000361909 VRK2Q86Y07 508 aa17.52■□□□□ 0.39
CMTM3-201ENST00000361909 SLC43A2Q8N370 569 aa17.52■□□□□ 0.39
CMTM3-201ENST00000361909 TMEM255BQ8WV15 326 aa17.52■□□□□ 0.39
CMTM3-201ENST00000361909 PIGKQ92643 395 aa17.52■□□□□ 0.39
CMTM3-201ENST00000361909 LGR4Q9BXB1 951 aa17.52■□□□□ 0.39
CMTM3-201ENST00000361909 EYSQ5T1H1 3165 aa17.51■□□□□ 0.39
CMTM3-201ENST00000361909 RIIAD1A6NNX1 92 aa17.51■□□□□ 0.39
CMTM3-201ENST00000361909 CDC42EP2O14613 210 aa17.51■□□□□ 0.39
CMTM3-201ENST00000361909 GPRIN2O60269 458 aa17.51■□□□□ 0.39
CMTM3-201ENST00000361909 CDC123O75794 336 aaPredicted RBP17.51■□□□□ 0.39
CMTM3-201ENST00000361909 KDM4BO94953 1096 aa17.51■□□□□ 0.39
CMTM3-201ENST00000361909 RASGRP1O95267 797 aa17.51■□□□□ 0.39
CMTM3-201ENST00000361909 APOC1P02654 83 aa17.51■□□□□ 0.39
CMTM3-201ENST00000361909 MGMTP16455 207 aa17.51■□□□□ 0.39
CMTM3-201ENST00000361909 SLC2A5P22732 501 aa17.51■□□□□ 0.39
CMTM3-201ENST00000361909 ACADLP28330 430 aa17.51■□□□□ 0.39
CMTM3-201ENST00000361909 PYCR1P32322 319 aa17.51■□□□□ 0.39
CMTM3-201ENST00000361909 RBMS2Q15434 407 aaKnown RBP17.51■□□□□ 0.39
CMTM3-201ENST00000361909 AMZ2Q86W34 360 aa17.51■□□□□ 0.39
CMTM3-201ENST00000361909 SMPDL3BQ92485 455 aa17.51■□□□□ 0.39
CMTM3-201ENST00000361909 S100A16Q96FQ6 103 aaKnown RBP17.51■□□□□ 0.39
CMTM3-201ENST00000361909 MRPL48Q96GC5 212 aaKnown RBP17.51■□□□□ 0.39
CMTM3-201ENST00000361909 OR7D2Q96RA2 312 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms