RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 TNFSF8P32971 234 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 CXCL12P48061 93 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 TGM4P49221 684 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 HNRNPFP52597 415 aaKnown RBP17.11■□□□□ 0.33
SHANK1-202ENST00000359082 MTCP1P56278 107 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 TAS2R30P59541 319 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 MLLT11Q13015 90 aaPredicted RBP17.11■□□□□ 0.33
SHANK1-202ENST00000359082 BCL7AQ4VC05 210 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 STEAP3Q658P3 488 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 NPSR1Q6W5P4 371 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 GTF2H4Q92759 462 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 SLC41A2Q96JW4 573 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 H0Y8G0 127 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 OR8G3PP0DMU2 310 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 CLDN12P56749 244 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 HSD17B7P56937 341 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 Q6ZPB1 254 aaPredicted RBP17.11■□□□□ 0.33
SHANK1-202ENST00000359082 ELF4Q99607 663 aaPredicted RBP17.11■□□□□ 0.33
SHANK1-202ENST00000359082 TXLNGYQ9BZA5 131 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 QRSL1Q9H0R6 528 aaKnown RBP17.11■□□□□ 0.33
SHANK1-202ENST00000359082 CALHM2Q9HA72 323 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 LUZP4Q9P127 313 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 RPS10-NUDT3A0A1W2PQS6 291 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 ZNF701M0R085 212 aaPredicted RBP17.11■□□□□ 0.33
SHANK1-202ENST00000359082 CACNG3O60359 315 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 RPS10P46783 165 aaKnown RBP17.11■□□□□ 0.33
SHANK1-202ENST00000359082 RPS25P62851 125 aaKnown RBP17.11■□□□□ 0.33
SHANK1-202ENST00000359082 AKR1C1Q04828 323 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 ZNF836Q6ZNA1 936 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 TERB2Q8NHR7 220 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 CPNE4Q96A23 557 aaPredicted RBP17.11■□□□□ 0.33
SHANK1-202ENST00000359082 STEAP1Q9UHE8 339 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 SNRPBP14678 240 aaKnown RBP17.11■□□□□ 0.33
SHANK1-202ENST00000359082 MFGE8Q08431 387 aaPredicted RBP17.11■□□□□ 0.33
SHANK1-202ENST00000359082 AMIGO3Q86WK7 504 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 OR11L1Q8NGX0 322 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 FIZ1Q96SL8 496 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 TCEAL2Q9H3H9 227 aaPredicted RBP17.11■□□□□ 0.33
SHANK1-202ENST00000359082 G3V3Y1 287 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 AOAHP28039 575 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 HBA1P69905 142 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 PLA2G7Q13093 441 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 FJX1Q86VR8 437 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 FGF13Q92913 245 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 EMCNQ9ULC0 261 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 PUS1Q9Y606 427 aaKnown RBP eCLIP17.1■□□□□ 0.33
SHANK1-202ENST00000359082 TCHHQ07283 1943 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 CD38P28907 300 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 YIF1BQ5BJH7 314 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 MORN1Q5T089 497 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 DUSP19Q8WTR2 217 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 SLC46A2Q9BY10 475 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 C1GALT1Q9NS00 363 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 DECR2Q9NUI1 292 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 GDE1Q9NZC3 331 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 SLC22A23A1A5C7 686 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 LCMT2O60294 686 aaKnown RBP17.1■□□□□ 0.33
SHANK1-202ENST00000359082 UBE2KP61086 200 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 RUNX2Q13950 521 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 OR8B8Q15620 311 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 TIMM29Q9BSF4 260 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 RNF32Q9H0A6 362 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 CDHR4A6H8M9 788 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 ACOD1A6NK06 481 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 TSTD3H0UI37 97 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 H0YGG7 62 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 AIPO00170 330 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 HSD17B6O14756 317 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 NFYAP23511 347 aaPredicted RBP17.1■□□□□ 0.33
SHANK1-202ENST00000359082 NPBWR1P48145 328 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 PDE7AQ13946 482 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 EBPQ15125 230 aaKnown RBP17.1■□□□□ 0.33
SHANK1-202ENST00000359082 FXNQ16595 210 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 HACD4Q5VWC8 232 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 CPXM2Q8N436 756 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 C19orf47Q8N9M1 422 aaKnown RBP17.1■□□□□ 0.33
SHANK1-202ENST00000359082 OR6T1Q8NGN1 323 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 EGLN2Q96KS0 407 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 OR6C1Q96RD1 312 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 WIF1Q9Y5W5 379 aa17.1■□□□□ 0.33
SHANK1-202ENST00000359082 TACR3P29371 465 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 THBS3P49746 956 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 F2RL1P55085 397 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 RAB38P57729 211 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 SMN1Q16637 294 aaKnown RBP17.09■□□□□ 0.33
SHANK1-202ENST00000359082 RPL22L1Q6P5R6 122 aaKnown RBP17.09■□□□□ 0.33
SHANK1-202ENST00000359082 OR5K2Q8NHB8 316 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 PPA2Q9H2U2 334 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 ARFGEF2Q9Y6D5 1785 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 OR7C1O76099 320 aaPredicted RBP17.09■□□□□ 0.33
SHANK1-202ENST00000359082 KCNJ10P78508 379 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 TBPL2Q6SJ96 375 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 SECTM1Q8WVN6 248 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 TPPP3Q9BW30 176 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 ZNF264O43296 627 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 DHRS4L1P0CG22 281 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 CLDN10P78369 228 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 TNFRSF17Q02223 184 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 PKDCCQ504Y2 493 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms