RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 KCTD18Q6PI47 426 aaPredicted RBP8.32□□□□□ -1.08
UPF2-202ENST00000357604 BHLHA15Q7RTS1 189 aaPredicted RBP8.32□□□□□ -1.08
UPF2-202ENST00000357604 PQLC1Q8N2U9 271 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 RELTQ969Z4 430 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 U3KQV3 271 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 ANPEPP15144 967 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 ASCL1P50553 236 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 ACTC1P68032 377 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 ACTA1P68133 377 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 PRKCDQ05655 676 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 KRT77Q7Z794 578 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 FAM156AQ8NDB6 213 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 ADPRHL1Q8NDY3 354 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 OR4K5Q8NGD3 323 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 BOD1Q96IK1 185 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 B8ZZF3 427 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 ARHGEF9O43307 516 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 GNALP38405 381 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 GPR4P46093 362 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 SLC6A9P48067 706 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 ZNF829Q3KNS6 432 aaPredicted RBP8.32□□□□□ -1.08
UPF2-202ENST00000357604 SLC16A14Q7RTX9 510 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 GIMAP5Q96F15 307 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 PLEKHA1Q9HB21 404 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 DYNLRB1Q9NP97 96 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 CKLFQ9UBR5 152 aa8.32□□□□□ -1.08
UPF2-202ENST00000357604 C7orf72A4D263 438 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 E9PLN8 166 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 KRT8P05787 483 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 DIO1P49895 249 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 MRPL28Q13084 256 aaKnown RBP8.31□□□□□ -1.08
UPF2-202ENST00000357604 PAQR6Q6TCH4 344 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 SLC35D2Q76EJ3 337 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 NSMAFQ92636 917 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 NR1H4Q96RI1 486 aaPredicted RBP8.31□□□□□ -1.08
UPF2-202ENST00000357604 MNTQ99583 582 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 VKORC1Q9BQB6 163 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 WACQ9BTA9 647 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 SAP130Q9H0E3 1048 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 ZNF385DQ9H6B1 395 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 CHCHD2Q9Y6H1 151 aaPredicted RBP8.31□□□□□ -1.08
UPF2-202ENST00000357604 OPN1LWP04000 364 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 ERFP50548 548 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 HSF1Q00613 529 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 PMP22Q01453 160 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 GLO1Q04760 184 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 PMPCAQ10713 525 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 SKP2Q13309 424 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 EPHX4Q8IUS5 362 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 ZNF441Q8N8Z8 693 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 MDS2Q8NDY4 140 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 OR6K6Q8NGW6 343 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 ZNF583Q96ND8 569 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 SIGLEC12Q96PQ1 595 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 TTYH2Q9BSA4 534 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 SPRY4Q9C004 299 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 TVP23BQ9NYZ1 205 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 KLHL13Q9P2N7 655 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 KCNG2Q9UJ96 466 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 LAMP5Q9UJQ1 280 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 N6AMT1Q9Y5N5 214 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 MYLKQ15746 1914 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 PLXNB3Q9ULL4 1909 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 IMPA2O14732 288 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 AKR7A3O95154 331 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 ZNF12P17014 697 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 ARRB2P32121 409 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 DAG1Q14118 895 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 SLC18B1Q6NT16 456 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 SMPD3Q9NY59 655 aaPredicted RBP8.31□□□□□ -1.08
UPF2-202ENST00000357604 MOKQ9UQ07 419 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 TBX1O43435 398 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 FRS3O43559 492 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 BMP2P12643 396 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 SEC23BQ15437 767 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 CLEC12AQ5QGZ9 265 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 THEM4Q5T1C6 240 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 CXXC5Q7LFL8 322 aaKnown RBP8.31□□□□□ -1.08
UPF2-202ENST00000357604 ZFP62Q8NB50 900 aaPredicted RBP8.31□□□□□ -1.08
UPF2-202ENST00000357604 LRTOMTQ8WZ04 291 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 PHF21AQ96BD5 680 aa8.31□□□□□ -1.08
UPF2-202ENST00000357604 MRPL39Q9NYK5 338 aaKnown RBP8.31□□□□□ -1.08
UPF2-202ENST00000357604 CLDN14O95500 239 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 TSPAN19P0C672 248 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 BIDP55957 195 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 TEKQ02763 1124 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 PLPPR5Q32ZL2 321 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 PLEKHN1Q494U1 663 aaPredicted RBP8.3□□□□□ -1.08
UPF2-202ENST00000357604 C4orf17Q53FE4 359 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 ZMAT1Q5H9K5 638 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 C16orf47Q6ZP98 133 aaPredicted RBP8.3□□□□□ -1.08
UPF2-202ENST00000357604 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.3□□□□□ -1.08
UPF2-202ENST00000357604 RBMXL3Q8N7X1 1067 aaKnown RBP8.3□□□□□ -1.08
UPF2-202ENST00000357604 AICDAQ9GZX7 198 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 ADAMTS9Q9P2N4 1935 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 H3BMH7 237 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 NADKO95544 446 aaPredicted RBP8.3□□□□□ -1.08
UPF2-202ENST00000357604 H2BFMP0C1H6 154 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 FPR3P25089 353 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms