RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 CARD18P57730 90 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 SLC35A1P78382 337 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 MYBPHQ13203 477 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 OR1Q1Q15612 314 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 IFI44LQ53G44 452 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 MTX3Q5HYI7 312 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 GTF2IRD2BQ6EKJ0 949 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 ULK3Q6PHR2 472 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 POMZP3Q6PJE2 187 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 CBLL1Q75N03 491 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 FCRLAQ7L513 359 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 GTF2IRD2Q86UP8 949 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 MCEMP1Q8IX19 187 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 ATP6V1C2Q8NEY4 427 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 OR6K3Q8NGY3 331 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 VANGL1Q8TAA9 524 aaPredicted RBP3.55□□□□□ -1.84
CNOT4-202ENST00000356162 FNDC9Q8TBE3 224 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 CA5BP1Q8WTZ4 195 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 FBLIM1Q8WUP2 373 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 OSTF1Q92882 214 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 FAM162AQ96A26 154 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 EPYCQ99645 322 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 MCHR1Q99705 422 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 NAA11Q9BSU3 229 aaPredicted RBP3.55□□□□□ -1.84
CNOT4-202ENST00000356162 TMEM43Q9BTV4 400 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 RSPO3Q9BXY4 272 aaPredicted RBP3.55□□□□□ -1.84
CNOT4-202ENST00000356162 PRRG4Q9BZD6 226 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 CHST11Q9NPF2 352 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 JKAMPQ9P055 326 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 KLHL9Q9P2J3 617 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 CD300AQ9UGN4 299 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 RPS6KA6Q9UK32 745 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 PACSIN3Q9UKS6 424 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 TRAPPC4Q9Y296 219 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 EMC9Q9Y3B6 208 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 SNX13Q9Y5W8 968 aa3.55□□□□□ -1.84
CNOT4-202ENST00000356162 HCFC1P51610 2035 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 BOD1L1Q8NFC6 3051 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 MED12LQ86YW9 2145 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 SMG1Q96Q15 3661 aaKnown RBP3.54□□□□□ -1.84
CNOT4-202ENST00000356162 TRAV36DV7A0A075B6V5 113 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 IGKV3D-15A0A087WSY6 115 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 TMEM238LA0A1B0GVL6 79 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 LIPT2A6NK58 231 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 ZNF724A8MTY0 619 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 SULT2B1O00204 365 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 SMAD9O15198 467 aaKnown RBP3.54□□□□□ -1.84
CNOT4-202ENST00000356162 EIF1BO60739 113 aaKnown RBP3.54□□□□□ -1.84
CNOT4-202ENST00000356162 AQP8O94778 261 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 UBOX5O94941 541 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 LYPD3O95274 346 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 SERPINA1P01009 418 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 F13BP05160 661 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 GPIP06744 558 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 THRBP10828 461 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 CD8BP10966 210 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 IMPDH2P12268 514 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 AGTR1P30556 359 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 CPOXP36551 454 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 DIO1P49895 249 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 AGFG1P52594 562 aaKnown RBP3.54□□□□□ -1.84
CNOT4-202ENST00000356162 SLC16A1P53985 500 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 OR2B6P58173 313 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 SLC25A3Q00325 362 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 HOXC5Q00444 222 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 TFF3Q07654 80 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 MFSD13AQ14CX5 517 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 DUSP7Q16829 419 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 DNAL1Q4LDG9 190 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 ALG10BQ5I7T1 473 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 ENTPD8Q5MY95 495 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 C1orf140Q5VVS0 124 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 PPP4R4Q6NUP7 873 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 DEFB107AQ8IZN7 70 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 ACBD4Q8NC06 268 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 RBM15BQ8NDT2 890 aaKnown RBP3.54□□□□□ -1.84
CNOT4-202ENST00000356162 ADPRHL1Q8NDY3 354 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 OR4D11Q8NGI4 311 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 OR6T1Q8NGN1 323 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 RNASE6Q93091 150 aaKnown RBP3.54□□□□□ -1.84
CNOT4-202ENST00000356162 INTS12Q96CB8 462 aaKnown RBP3.54□□□□□ -1.84
CNOT4-202ENST00000356162 MPP4Q96JB8 637 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 PRRC1Q96M27 445 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 TAPBPLQ9BX59 468 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 OR11A1Q9GZK7 315 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 C1orf21Q9H246 121 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 BCO1Q9HAY6 547 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 KCNJ16Q9NPI9 418 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 EMC3Q9P0I2 261 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 KLHL13Q9P2N7 655 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 PLEKHB1Q9UF11 243 aaPredicted RBP3.54□□□□□ -1.84
CNOT4-202ENST00000356162 PROCRQ9UNN8 238 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 SAMD4AQ9UPU9 718 aaKnown RBP3.54□□□□□ -1.84
CNOT4-202ENST00000356162 UBR5O95071 2799 aaPredicted RBP3.54□□□□□ -1.84
CNOT4-202ENST00000356162 IGKV1D-42A0A075B6H8 117 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 A0A087WUJ7 227 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 A1L4Q6 167 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 ZC3H12DA2A288 527 aaKnown RBP3.54□□□□□ -1.84
CNOT4-202ENST00000356162 AQP7P3A6NL99 342 aa3.54□□□□□ -1.84
CNOT4-202ENST00000356162 CPSF4LA6NMK7 179 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms