RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 EPHX3Q9H6B9 360 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 LHX6Q9UPM6 363 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 CASP7P55210 303 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 SERPINA11Q86U17 422 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 BORCS6Q96GS4 357 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 ELOVL3Q9HB03 270 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 PRELID3BQ9Y3B1 194 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 URGCP-MRPS24S4R325 110 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 AHRP35869 848 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 SLC25A11Q02978 314 aaKnown RBP16.12■□□□□ 0.17
COL27A1-201ENST00000356083 PODNL1Q6PEZ8 512 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 CAMKMTQ7Z624 323 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 NAGSQ8N159 534 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 NTPCRQ9BSD7 190 aaKnown RBP16.12■□□□□ 0.17
COL27A1-201ENST00000356083 PCDHA9Q9Y5H5 950 aa16.12■□□□□ 0.17
COL27A1-201ENST00000356083 TNFRSF4P43489 277 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 SCML4Q8N228 414 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 TANKQ92844 425 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 TXNRD2Q9NNW7 524 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 PURGQ9UJV8 347 aaKnown RBP16.11■□□□□ 0.17
COL27A1-201ENST00000356083 ZFP92A6NM28 416 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 RGRP47804 291 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 EBPQ15125 230 aaKnown RBP16.11■□□□□ 0.17
COL27A1-201ENST00000356083 NANPQ8TBE9 248 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 PEBP4Q96S96 227 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 KCNIP2Q9NS61 270 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 COPS3Q9UNS2 423 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 SLC35A3Q9Y2D2 325 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 FAM72CH0Y354 149 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 ARPC1BO15143 372 aaKnown RBP16.11■□□□□ 0.17
COL27A1-201ENST00000356083 SPINT2O43291 252 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 HNRNPA1P09651 372 aaKnown RBP eCLIP16.11■□□□□ 0.175e-6■□□□□ 10.4
COL27A1-201ENST00000356083 CPT2P23786 658 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 IDUAP35475 653 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 KIR2DL3P43628 341 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 DUSP2Q05923 314 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 MOGQ16653 247 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 FAM72AQ5TYM5 149 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 FAM72DQ6L9T8 149 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 MAMDC4Q6UXC1 1216 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 AAED1Q7RTV5 226 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 FAM72BQ86X60 149 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 TUSC5Q8IXB3 177 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 TMEM239Q8WW34 195 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 GMLQ99445 158 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 EGLN1Q9GZT9 426 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 C1orf198Q9H425 327 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 P4HTMQ9NXG6 502 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 RNF150Q9ULK6 438 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 SDK2Q58EX2 2172 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 NCR1O76036 304 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 FRMD1Q8N878 549 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 CCDC106Q9BWC9 280 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 AGPAT4Q9NRZ5 378 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 FRMPD1Q5SYB0 1578 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 SCGB1C2P0DMR2 95 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 CALCBP10092 127 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 CATR1Q13166 79 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 TMEM43Q9BTV4 400 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 MFFQ9GZY8 342 aa16.11■□□□□ 0.17
COL27A1-201ENST00000356083 UBR1Q8IWV7 1749 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 EIF2DP41214 584 aaKnown RBP16.1■□□□□ 0.17
COL27A1-201ENST00000356083 NPSR1Q6W5P4 371 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 PACRGLQ8N7B6 248 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 OR8J3Q8NGG0 315 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 OR1J2Q8NGS2 313 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 SLC39A7Q92504 469 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 APH1AQ96BI3 265 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 MRGPRX2Q96LB1 330 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 MTCL1Q9Y4B5 1905 aaKnown RBP16.1■□□□□ 0.17
COL27A1-201ENST00000356083 NFKBIEO00221 500 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 FOXE1O00358 373 aaPredicted RBP16.1■□□□□ 0.17
COL27A1-201ENST00000356083 FADS1O60427 444 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 TBPP20226 339 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 TM4SF1P30408 202 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 GALEQ14376 348 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 UCN3Q969E3 161 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 AMBRA1Q9C0C7 1298 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 MED20Q9H944 212 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 PPP1R3CQ9UQK1 317 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 A0A0B4J2A0 478 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 TRGV8A0A0C4DH27 118 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 TBC1D28Q2M2D7 210 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 MPEG1Q2M385 716 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 PLA1AQ53H76 456 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 WFDC8Q8IUA0 241 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 ST8SIA2Q92186 375 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 SHPKQ9UHJ6 478 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 USP32Q8NFA0 1604 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 OR2M5A3KFT3 312 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 ZNF840PA6NDX5 716 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 DCAF12L1Q5VU92 463 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 APOOLQ6UXV4 268 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 FAM109AQ8N4B1 249 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 MTMR14Q8NCE2 650 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 ZBED3Q96IU2 234 aaPredicted RBP16.1■□□□□ 0.17
COL27A1-201ENST00000356083 PREBQ9HCU5 417 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 NPTNQ9Y639 398 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 AGLP35573 1532 aa16.1■□□□□ 0.17
COL27A1-201ENST00000356083 PRRG2O14669 202 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms