RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 SLC35A4Q96G79 324 aa17.39■□□□□ 0.37
PRPF39-201ENST00000355765 LMLNQ96KR4 655 aa17.39■□□□□ 0.37
PRPF39-201ENST00000355765 MDC1Q14676 2089 aaKnown RBP17.39■□□□□ 0.37
PRPF39-201ENST00000355765 OR6C68A6NDL8 312 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 GRM6O15303 877 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 UBBP0CG47 229 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 UBCP0CG48 685 aaKnown RBP17.38■□□□□ 0.37
PRPF39-201ENST00000355765 RPS27AP62979 156 aaKnown RBP17.38■□□□□ 0.37
PRPF39-201ENST00000355765 UBA52P62987 128 aaKnown RBP17.38■□□□□ 0.37
PRPF39-201ENST00000355765 KRT33BQ14525 404 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 RBMS2Q15434 407 aaKnown RBP17.38■□□□□ 0.37
PRPF39-201ENST00000355765 HYAL4Q2M3T9 481 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 TMEM25Q86YD3 366 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 OR1S2Q8NGQ3 325 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 TMEM239Q8WW34 195 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 CDS1Q92903 461 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 ZNF223Q9UK11 482 aaPredicted RBP17.38■□□□□ 0.37
PRPF39-201ENST00000355765 SLC35A3Q9Y2D2 325 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 ZNF879B4DU55 563 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 NEDD8-MDP1E9PL57 170 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 GP1BAP07359 652 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 ADCYAP1P18509 176 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 HTR2AP28223 471 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 GABRR2P28476 465 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 SWI5Q1ZZU3 235 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 FRRS1Q6ZNA5 592 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 OR2W3Q7Z3T1 314 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 ZNF559Q9BR84 538 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 ASF1BQ9NVP2 202 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 EIF4E2O60573 245 aaKnown RBP17.38■□□□□ 0.37
PRPF39-201ENST00000355765 ITPKBP27987 946 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 GRPRP30550 384 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 METAP1P53582 386 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 GUCA2AQ02747 115 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 MRM1Q6IN84 353 aaKnown RBP17.38■□□□□ 0.37
PRPF39-201ENST00000355765 TMEM64Q6YI46 380 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 MOB3CQ70IA8 216 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 SLC16A13Q7RTY0 426 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 SDR9C7Q8NEX9 313 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 OR51S1Q8NGJ8 323 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 ADAMTS15Q8TE58 950 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 DVL3Q92997 716 aaPredicted RBP17.38■□□□□ 0.37
PRPF39-201ENST00000355765 ZNF471Q9BX82 626 aaPredicted RBP17.38■□□□□ 0.37
PRPF39-201ENST00000355765 V9GY05 133 aa17.38■□□□□ 0.37
PRPF39-201ENST00000355765 NPIPA5A0A0B4J1W7 369 aa17.37■□□□□ 0.37
PRPF39-201ENST00000355765 NPIPA7E9PJI5 369 aa17.37■□□□□ 0.37
PRPF39-201ENST00000355765 EMC8O43402 210 aa17.37■□□□□ 0.37
PRPF39-201ENST00000355765 NPIPA8P0DM63 369 aa17.37■□□□□ 0.37
PRPF39-201ENST00000355765 F3P13726 295 aa17.37■□□□□ 0.37
PRPF39-201ENST00000355765 MGMTP16455 207 aa17.37■□□□□ 0.37
PRPF39-201ENST00000355765 ZNF3P17036 446 aa17.37■□□□□ 0.37
PRPF39-201ENST00000355765 MECP2P51608 486 aaKnown RBP17.37■□□□□ 0.37
PRPF39-201ENST00000355765 ZNF136P52737 540 aa17.37■□□□□ 0.37
PRPF39-201ENST00000355765 OR8S1Q8NH09 359 aa17.37■□□□□ 0.37
PRPF39-201ENST00000355765 ING5Q8WYH8 240 aa17.37■□□□□ 0.37
PRPF39-201ENST00000355765 C10orf90Q96M02 699 aa17.37■□□□□ 0.37
PRPF39-201ENST00000355765 CRB3Q9BUF7 120 aa17.37■□□□□ 0.37
PRPF39-201ENST00000355765 TSPAN10Q9H1Z9 355 aaPredicted RBP17.37■□□□□ 0.37
PRPF39-201ENST00000355765 PCDHB10Q9UN67 800 aa17.37■□□□□ 0.37
PRPF39-201ENST00000355765 SLC25A12O75746 678 aa17.37■□□□□ 0.37
PRPF39-201ENST00000355765 EIF3GO75821 320 aaKnown RBP eCLIP17.37■□□□□ 0.37
PRPF39-201ENST00000355765 AKR7A3O95154 331 aa17.37■□□□□ 0.37
PRPF39-201ENST00000355765 ACTC1P68032 377 aa17.37■□□□□ 0.37
PRPF39-201ENST00000355765 ACTA1P68133 377 aa17.37■□□□□ 0.37
PRPF39-201ENST00000355765 REEP5Q00765 189 aa17.37■□□□□ 0.37
PRPF39-201ENST00000355765 SFXN5Q8TD22 340 aa17.37■□□□□ 0.37
PRPF39-201ENST00000355765 COL26A1Q96A83 441 aa17.37■□□□□ 0.37
PRPF39-201ENST00000355765 BPIFA2Q96DR5 249 aa17.37■□□□□ 0.37
PRPF39-201ENST00000355765 IL21Q9HBE4 155 aa17.37■□□□□ 0.37
PRPF39-201ENST00000355765 RFPL4AA6NLU0 287 aa17.36■□□□□ 0.37
PRPF39-201ENST00000355765 RFPL4AL1F8VTS6 287 aa17.36■□□□□ 0.37
PRPF39-201ENST00000355765 ERI3O43414 337 aaKnown RBP17.36■□□□□ 0.37
PRPF39-201ENST00000355765 RCBTB2O95199 551 aa17.36■□□□□ 0.37
PRPF39-201ENST00000355765 AIFM1O95831 613 aa17.36■□□□□ 0.37
PRPF39-201ENST00000355765 RFC3P40938 356 aa17.36■□□□□ 0.37
PRPF39-201ENST00000355765 PRMT2P55345 433 aa17.36■□□□□ 0.37
PRPF39-201ENST00000355765 CCDC157Q569K6 752 aa17.36■□□□□ 0.37
PRPF39-201ENST00000355765 EID2Q8N6I1 236 aa17.36■□□□□ 0.37
PRPF39-201ENST00000355765 OR4K13Q8NH42 304 aa17.36■□□□□ 0.37
PRPF39-201ENST00000355765 SFT2D1Q8WV19 159 aa17.36■□□□□ 0.37
PRPF39-201ENST00000355765 TFGQ92734 400 aaPredicted RBP17.36■□□□□ 0.37
PRPF39-201ENST00000355765 HAVCR1Q96D42 359 aa17.36■□□□□ 0.37
PRPF39-201ENST00000355765 C2orf42Q9NWW7 574 aa17.36■□□□□ 0.37
PRPF39-201ENST00000355765 SIGLEC7Q9Y286 467 aa17.36■□□□□ 0.37
PRPF39-201ENST00000355765 TMEM200CA6NKL6 621 aa17.36■□□□□ 0.37
PRPF39-201ENST00000355765 BDKRB2P30411 391 aa17.36■□□□□ 0.37
PRPF39-201ENST00000355765 SOX2P48431 317 aa17.36■□□□□ 0.37
PRPF39-201ENST00000355765 SLC9A5Q14940 896 aa17.36■□□□□ 0.37
PRPF39-201ENST00000355765 MAMSTRQ6ZN01 415 aa17.36■□□□□ 0.37
PRPF39-201ENST00000355765 GLB1L2Q8IW92 636 aa17.36■□□□□ 0.37
PRPF39-201ENST00000355765 C12orf45Q8N5I9 185 aaPredicted RBP17.36■□□□□ 0.37
PRPF39-201ENST00000355765 OR52E2Q8NGJ4 325 aa17.36■□□□□ 0.37
PRPF39-201ENST00000355765 OR14A16Q8NHC5 309 aa17.36■□□□□ 0.37
PRPF39-201ENST00000355765 EXO5Q9H790 373 aa17.36■□□□□ 0.37
PRPF39-201ENST00000355765 RNF186Q9NXI6 227 aa17.36■□□□□ 0.37
PRPF39-201ENST00000355765 ZNF337Q9Y3M9 751 aa17.36■□□□□ 0.37
PRPF39-201ENST00000355765 WDR45Q9Y484 360 aa17.36■□□□□ 0.37
PRPF39-201ENST00000355765 SCN3AQ9NY46 2000 aa17.35■□□□□ 0.37
PRPF39-201ENST00000355765 PQLC2LA1A4F0 135 aa17.35■□□□□ 0.37
PRPF39-201ENST00000355765 TMEM218A2RU14 115 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms