RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 FOXJ2Q9P0K8 574 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 SDK2Q58EX2 2172 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 PTPRZ1P23471 2315 aaPredicted RBP12.25□□□□□ -0.45
UBA3-201ENST00000349511 LAMA5O15230 3695 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 A0A0B4J293 547 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 TRBV11-1A0A0K0K1C0 115 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 TRDV1A0A1B0GX56 115 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 C9orf172C9J069 976 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 C9J4A7 227 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 CASKO14936 926 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 ZNF354AO60765 605 aaPredicted RBP12.25□□□□□ -0.45
UBA3-201ENST00000349511 ICOSLGO75144 302 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 SOX30O94993 753 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 CH25HO95992 272 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 HPGDP15428 266 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 ZNF24P17028 368 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 DRD5P21918 477 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 APEX1P27695 318 aaKnown RBP12.25□□□□□ -0.45
UBA3-201ENST00000349511 ABCD3P28288 659 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 SLC1A3P43003 542 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 OMPP47874 163 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 PPP3R1P63098 170 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 PLCXD2Q0VAA5 305 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 OR1Q1Q15612 314 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 CD226Q15762 336 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 CDCP2Q5VXM1 449 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 CD200R1LQ6Q8B3 271 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 RANBP3LQ86VV4 465 aaPredicted RBP12.25□□□□□ -0.45
UBA3-201ENST00000349511 RNF170Q96K19 258 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 FRMD6Q96NE9 622 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 RTN4RQ9BZR6 473 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 RNF121Q9H920 327 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 RANGRFQ9HD47 186 aaPredicted RBP12.25□□□□□ -0.45
UBA3-201ENST00000349511 WDR70Q9NW82 654 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 DNAJB12Q9NXW2 375 aaKnown RBP12.25□□□□□ -0.45
UBA3-201ENST00000349511 NPIPB9F8W1W9 429 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 HPGDSO60760 199 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 UTS2O95399 124 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 CSTAP01040 98 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 CELA2AP08217 269 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 TCN2P20062 427 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 IL12BP29460 328 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 CDH11P55287 796 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 ST3GAL3Q11203 375 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 FGFBP1Q14512 234 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 ZNF141Q15928 474 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.25□□□□□ -0.45
UBA3-201ENST00000349511 LCN1P1Q5VSP4 162 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 OR4F15Q8NGB8 312 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 OR4Q3Q8NH05 313 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 PHOSPHO1Q8TCT1 267 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 OMA1Q96E52 524 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 FYTTD1Q96QD9 318 aaKnown RBP12.25□□□□□ -0.45
UBA3-201ENST00000349511 TAAR9Q96RI9 348 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 DCLRE1CQ96SD1 692 aaKnown RBP12.25□□□□□ -0.45
UBA3-201ENST00000349511 PLSCR3Q9NRY6 295 aa12.25□□□□□ -0.45
UBA3-201ENST00000349511 SERINC4A6NH21 518 aa12.24□□□□□ -0.45
UBA3-201ENST00000349511 GNB5O14775 395 aa12.24□□□□□ -0.45
UBA3-201ENST00000349511 PIP5K1CO60331 668 aa12.24□□□□□ -0.45
UBA3-201ENST00000349511 IL33O95760 270 aa12.24□□□□□ -0.45
UBA3-201ENST00000349511 QPRTQ15274 297 aa12.24□□□□□ -0.45
UBA3-201ENST00000349511 SLC30A6Q6NXT4 461 aa12.24□□□□□ -0.45
UBA3-201ENST00000349511 CNIH2Q6PI25 160 aa12.24□□□□□ -0.45
UBA3-201ENST00000349511 CBLN3Q6UW01 205 aa12.24□□□□□ -0.45
UBA3-201ENST00000349511 TMEM205Q6UW68 189 aa12.24□□□□□ -0.45
UBA3-201ENST00000349511 WDR88Q6ZMY6 472 aa12.24□□□□□ -0.45
UBA3-201ENST00000349511 RRM2BQ7LG56 351 aa12.24□□□□□ -0.45
UBA3-201ENST00000349511 PIP4P1Q86T03 277 aa12.24□□□□□ -0.45
UBA3-201ENST00000349511 CADM2Q8N3J6 435 aa12.24□□□□□ -0.45
UBA3-201ENST00000349511 POGLUT1Q8NBL1 392 aa12.24□□□□□ -0.45
UBA3-201ENST00000349511 PIGXQ8TBF5 258 aa12.24□□□□□ -0.45
UBA3-201ENST00000349511 ENKURQ8TC29 256 aa12.24□□□□□ -0.45
UBA3-201ENST00000349511 UBASH3BQ8TF42 649 aa12.24□□□□□ -0.45
UBA3-201ENST00000349511 DCHS1Q96JQ0 3298 aa12.24□□□□□ -0.45
UBA3-201ENST00000349511 LRFN5Q96NI6 719 aa12.24□□□□□ -0.45
UBA3-201ENST00000349511 ATF6BQ99941 703 aa12.24□□□□□ -0.45
UBA3-201ENST00000349511 KLHDC3Q9BQ90 382 aa12.24□□□□□ -0.45
UBA3-201ENST00000349511 SOSTQ9BQB4 213 aa12.24□□□□□ -0.45
UBA3-201ENST00000349511 TMEM246Q9BRR3 403 aa12.24□□□□□ -0.45
UBA3-201ENST00000349511 TMED9Q9BVK6 235 aa12.24□□□□□ -0.45
UBA3-201ENST00000349511 PRRG3Q9BZD7 231 aa12.24□□□□□ -0.45
UBA3-201ENST00000349511 PCNX3Q9H6A9 2034 aa12.24□□□□□ -0.45
UBA3-201ENST00000349511 PPP1R3EQ9H7J1 279 aa12.24□□□□□ -0.45
UBA3-201ENST00000349511 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.24□□□□□ -0.45
UBA3-201ENST00000349511 PAQR5Q9NXK6 330 aaPredicted RBP12.24□□□□□ -0.45
UBA3-201ENST00000349511 MALT1Q9UDY8 824 aa12.24□□□□□ -0.45
UBA3-201ENST00000349511 PADI1Q9ULC6 663 aa12.24□□□□□ -0.45
UBA3-201ENST00000349511 ANKRD34BA5PLL1 514 aa12.23□□□□□ -0.45
UBA3-201ENST00000349511 SURF4O15260 269 aa12.23□□□□□ -0.45
UBA3-201ENST00000349511 NCR1O76036 304 aa12.23□□□□□ -0.45
UBA3-201ENST00000349511 IFNA8P32881 189 aa12.23□□□□□ -0.45
UBA3-201ENST00000349511 ACAA2P42765 397 aaKnown RBP12.23□□□□□ -0.45
UBA3-201ENST00000349511 CCR4P51679 360 aa12.23□□□□□ -0.45
UBA3-201ENST00000349511 BTBD16Q32M84 506 aa12.23□□□□□ -0.45
UBA3-201ENST00000349511 KLHL26Q53HC5 615 aa12.23□□□□□ -0.45
UBA3-201ENST00000349511 AADACL4Q5VUY2 407 aa12.23□□□□□ -0.45
UBA3-201ENST00000349511 NOXA1Q86UR1 476 aa12.23□□□□□ -0.45
UBA3-201ENST00000349511 ARIH2OSQ8N7S6 290 aa12.23□□□□□ -0.45
UBA3-201ENST00000349511 NR4A3Q92570 626 aa12.23□□□□□ -0.45
UBA3-201ENST00000349511 LIN37Q96GY3 246 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms