RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 PATE3B3GLJ2 98 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 ICOSLGO75144 302 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 HLA-DQA2P01906 255 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 GPR3P46089 330 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 HSD11B2P80365 405 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 FAPQ12884 760 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 GUSBP11Q6P575 273 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 MEPCEQ7L2J0 689 aaKnown RBP12.73□□□□□ -0.37
TRIM4-201ENST00000349062 SLA2Q9H6Q3 261 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 GMEB2Q9UKD1 530 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 A3GALT2U3KPV4 340 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 V9GYH0 126 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 A0A0B4J203 849 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 A0A0B4J2E0 115 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 A0A1B0GX12 115 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 SELENOFO60613 162 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 WISP1O95388 367 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 FCER2P06734 321 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 SHC1P29353 583 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 EFR3AQ14156 821 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 C3orf38Q5JPI3 329 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 NIPAL3Q6P499 406 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 CD300LDQ6UXZ3 194 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 SLC2A12Q8TD20 617 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 PTPMT1Q8WUK0 201 aaPredicted RBP12.73□□□□□ -0.37
TRIM4-201ENST00000349062 SNX33Q8WV41 574 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 SMPDL3BQ92485 455 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 SGTBQ96EQ0 304 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 NUDT9Q9BW91 350 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 TBL1XR1Q9BZK7 514 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 TRIM2Q9C040 744 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 SRRQ9GZT4 340 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 NXF2Q9GZY0 626 aaKnown RBP12.73□□□□□ -0.37
TRIM4-201ENST00000349062 GALNT9Q9HCQ5 603 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 ZNF304Q9HCX3 659 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 ASB6Q9NWX5 421 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 ZNF222Q9UK12 451 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 EXOSC1Q9Y3B2 195 aaKnown RBP12.73□□□□□ -0.37
TRIM4-201ENST00000349062 A0A0G2JMP0 313 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 SHISA3A0PJX4 238 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 ZNF670-ZNF695F2Z2N8 137 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 GABRPO00591 440 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 AKAP8O43823 692 aaKnown RBP12.73□□□□□ -0.37
TRIM4-201ENST00000349062 PAHP00439 452 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 OR10A3P58181 314 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 DDI2Q5TDH0 399 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 Q8N402 240 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 ZNF524Q96C55 264 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 MOGAT1Q96PD6 335 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 SERTAD3Q9UJW9 196 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 SLC6A5Q9Y345 797 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 ALG5Q9Y673 324 aa12.73□□□□□ -0.37
TRIM4-201ENST00000349062 TEX13CA0A0J9YWL9 993 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 CHP2O43745 196 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 UTS2O95399 124 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 HK1P19367 917 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 HTR1FP30939 366 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 PSPHP78330 225 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 MANEAQ5SRI9 462 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 LCN1P1Q5VSP4 162 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 ULK3Q6PHR2 472 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 PLXDC1Q8IUK5 500 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 ZNF433Q8N7K0 673 aaPredicted RBP12.72□□□□□ -0.37
TRIM4-201ENST00000349062 C17orf47Q8NEP4 570 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 OR8K3Q8NH51 312 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 ZNRF4Q8WWF5 429 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 OR6C1Q96RD1 312 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 NKX3-1Q99801 234 aaPredicted RBP12.72□□□□□ -0.37
TRIM4-201ENST00000349062 G6PC3Q9BUM1 346 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 CACNA1HO95180 2353 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 KDM4EB2RXH2 506 aaPredicted RBP12.72□□□□□ -0.37
TRIM4-201ENST00000349062 ARRB1P49407 418 aaPredicted RBP12.72□□□□□ -0.37
TRIM4-201ENST00000349062 PLCXD2Q0VAA5 305 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 TCTE1Q5JU00 501 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 LEG1Q6P5S2 330 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 ZNF322Q6U7Q0 402 aaPredicted RBP12.72□□□□□ -0.37
TRIM4-201ENST00000349062 TMPRSS9Q7Z410 1059 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 EID2Q8N6I1 236 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 OR5J2Q8NH18 312 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 SHDQ96IW2 340 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 PDCD1LG2Q9BQ51 273 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 TMEM185BQ9H7F4 350 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 NANSQ9NR45 359 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 ING3Q9NXR8 418 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 ZNF223Q9UK11 482 aaPredicted RBP12.72□□□□□ -0.37
TRIM4-201ENST00000349062 VDAC3Q9Y277 283 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 A0A0B4J293 547 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 SHISA8B8ZZ34 492 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 I3L521 148 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 BHLHE40O14503 412 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 MSL3P1P0C860 447 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 POU3F3P20264 500 aaPredicted RBP12.72□□□□□ -0.37
TRIM4-201ENST00000349062 SLC6A6P31641 620 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 GRK6P43250 576 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 EFNA3P52797 238 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 P2RY14Q15391 338 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 HYAL4Q2M3T9 481 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 YIF1BQ5BJH7 314 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 CEACAM19Q7Z692 300 aa12.72□□□□□ -0.37
TRIM4-201ENST00000349062 MAFAQ8NHW3 353 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms