RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 DUSP2Q05923 314 aa17.17■□□□□ 0.34
SCARF1-202ENST00000348987 STPG1Q5TH74 334 aa17.17■□□□□ 0.34
SCARF1-202ENST00000348987 NUDT13Q86X67 352 aa17.17■□□□□ 0.34
SCARF1-202ENST00000348987 CBLN2Q8IUK8 224 aa17.17■□□□□ 0.34
SCARF1-202ENST00000348987 TMIEQ8NEW7 156 aa17.17■□□□□ 0.34
SCARF1-202ENST00000348987 SMPDL3BQ92485 455 aa17.17■□□□□ 0.34
SCARF1-202ENST00000348987 COX14Q96I36 57 aa17.17■□□□□ 0.34
SCARF1-202ENST00000348987 TSNAXQ99598 290 aaKnown RBP17.17■□□□□ 0.34
SCARF1-202ENST00000348987 MCHR1Q99705 422 aa17.17■□□□□ 0.34
SCARF1-202ENST00000348987 CCDC86Q9H6F5 360 aaKnown RBP17.17■□□□□ 0.34
SCARF1-202ENST00000348987 SLC27A6Q9Y2P4 619 aa17.17■□□□□ 0.34
SCARF1-202ENST00000348987 ARL6IP5O75915 188 aa17.17■□□□□ 0.34
SCARF1-202ENST00000348987 SERPINA3P01011 423 aa17.17■□□□□ 0.34
SCARF1-202ENST00000348987 PTH2RP49190 550 aa17.17■□□□□ 0.34
SCARF1-202ENST00000348987 ZNF528Q3MIS6 628 aa17.17■□□□□ 0.34
SCARF1-202ENST00000348987 METRNLQ641Q3 311 aa17.17■□□□□ 0.34
SCARF1-202ENST00000348987 OLFML2AQ68BL7 652 aa17.17■□□□□ 0.34
SCARF1-202ENST00000348987 LDLRAD3Q86YD5 345 aa17.17■□□□□ 0.34
SCARF1-202ENST00000348987 PUSL1Q8N0Z8 303 aaKnown RBP17.17■□□□□ 0.34
SCARF1-202ENST00000348987 GJD3Q8N144 294 aa17.17■□□□□ 0.34
SCARF1-202ENST00000348987 TMEM185AQ8NFB2 350 aa17.17■□□□□ 0.34
SCARF1-202ENST00000348987 STK35Q8TDR2 534 aa17.17■□□□□ 0.34
SCARF1-202ENST00000348987 C2CD4CQ8TF44 421 aa17.17■□□□□ 0.34
SCARF1-202ENST00000348987 WNT2BQ93097 391 aa17.17■□□□□ 0.34
SCARF1-202ENST00000348987 PEX11GQ96HA9 241 aa17.17■□□□□ 0.34
SCARF1-202ENST00000348987 SLC38A1Q9H2H9 487 aa17.17■□□□□ 0.34
SCARF1-202ENST00000348987 ADGRL4Q9HBW9 690 aa17.17■□□□□ 0.34
SCARF1-202ENST00000348987 EQTNQ9NQ60 294 aa17.17■□□□□ 0.34
SCARF1-202ENST00000348987 BIN3Q9NQY0 253 aa17.17■□□□□ 0.34
SCARF1-202ENST00000348987 RASL12Q9NYN1 266 aa17.17■□□□□ 0.34
SCARF1-202ENST00000348987 SLC7A7Q9UM01 511 aa17.17■□□□□ 0.34
SCARF1-202ENST00000348987 DENND4AQ7Z401 1863 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 PQLC2LA1A4F0 135 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 OR2W5A6NFC9 320 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 H0YC42 278 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 SCAMP1O15126 338 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 ERAL1O75616 437 aaKnown RBP17.16■□□□□ 0.34
SCARF1-202ENST00000348987 RLN1P04808 185 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 C8orf89P0DMQ9 161 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 P2RX1P51575 399 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 AKR1C2P52895 323 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 RPS15P62841 145 aaKnown RBP17.16■□□□□ 0.34
SCARF1-202ENST00000348987 CSNK1G2P78368 415 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 REEP5Q00765 189 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 TNFRSF17Q02223 184 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 AKR1C1Q04828 323 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 IL10RAQ13651 578 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 AGERQ15109 404 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 CYB561A3Q8NBI2 242 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 DNAAF1Q8NEP3 725 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 OR2AK2Q8NG84 335 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 C1orf216Q8TAB5 229 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 C10orf90Q96M02 699 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 UTP23Q9BRU9 249 aaKnown RBP17.16■□□□□ 0.34
SCARF1-202ENST00000348987 C1QTNF2Q9BXJ5 285 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 PRDM9Q9NQV7 894 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 INPP5EQ9NRR6 644 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 ANKRD10Q9NXR5 420 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 PLEKHM1Q9Y4G2 1056 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 EDDM13A0A1B0GTR0 161 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 A0A1B0GW55 424 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 SLC22A31A6NKX4 558 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 ZNF254O75437 659 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 FGF19O95750 216 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 DUX4L2P0CJ85 424 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 DUX4L3P0CJ86 424 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 DUX4L4P0CJ87 422 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 DUX4L5P0CJ88 424 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 DUX4L6P0CJ89 424 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 DUX4L7P0CJ90 424 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 PVALBP20472 110 aaPredicted RBP17.16■□□□□ 0.34
SCARF1-202ENST00000348987 CDK3Q00526 305 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 FAM109BQ6ICB4 259 aaPredicted RBP17.16■□□□□ 0.34
SCARF1-202ENST00000348987 C11orf88Q6PI97 169 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 ZNF433Q8N7K0 673 aaPredicted RBP17.16■□□□□ 0.34
SCARF1-202ENST00000348987 CXorf40AQ8TE69 158 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 CMSS1Q9BQ75 279 aaKnown RBP17.16■□□□□ 0.34
SCARF1-202ENST00000348987 SLC25A18Q9H1K4 315 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 SYNPO2LQ9H987 977 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 MBNL1Q9NR56 388 aaKnown RBP17.16■□□□□ 0.34
SCARF1-202ENST00000348987 DUX4Q9UBX2 424 aa17.16■□□□□ 0.34
SCARF1-202ENST00000348987 TRAV20A0A0B4J274 112 aa17.15■□□□□ 0.34
SCARF1-202ENST00000348987 SYT5O00445 386 aa17.15■□□□□ 0.34
SCARF1-202ENST00000348987 BHLHE40O14503 412 aa17.15■□□□□ 0.34
SCARF1-202ENST00000348987 ADH1CP00326 375 aa17.15■□□□□ 0.34
SCARF1-202ENST00000348987 SSR2P43308 183 aa17.15■□□□□ 0.34
SCARF1-202ENST00000348987 STARP49675 285 aa17.15■□□□□ 0.34
SCARF1-202ENST00000348987 VASPP50552 380 aaPredicted RBP17.15■□□□□ 0.34
SCARF1-202ENST00000348987 MLF2Q15773 248 aaPredicted RBP17.15■□□□□ 0.34
SCARF1-202ENST00000348987 SLC36A1Q7Z2H8 476 aa17.15■□□□□ 0.34
SCARF1-202ENST00000348987 MUC20Q8N307 709 aaPredicted RBP17.15■□□□□ 0.34
SCARF1-202ENST00000348987 CAMKVQ8NCB2 501 aa17.15■□□□□ 0.34
SCARF1-202ENST00000348987 WFIKKN2Q8TEU8 576 aa17.15■□□□□ 0.34
SCARF1-202ENST00000348987 PDCD1LG2Q9BQ51 273 aa17.15■□□□□ 0.34
SCARF1-202ENST00000348987 DEC1Q9P2X7 70 aa17.15■□□□□ 0.34
SCARF1-202ENST00000348987 MOKQ9UQ07 419 aa17.15■□□□□ 0.34
SCARF1-202ENST00000348987 ZNF749O43361 778 aa17.15■□□□□ 0.34
SCARF1-202ENST00000348987 CNR1P21554 472 aa17.15■□□□□ 0.34
SCARF1-202ENST00000348987 KCNJ3P48549 501 aa17.15■□□□□ 0.34
SCARF1-202ENST00000348987 MECP2P51608 486 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms