RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 KCNJ8Q15842 424 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 SOWAHCQ53LP3 525 aaPredicted RBP8.42□□□□□ -1.06
ATG4A-202ENST00000345734 SLC35F1Q5T1Q4 408 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 AADACL4Q5VUY2 407 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 FCRLBQ6BAA4 426 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 SMARCD3Q6STE5 483 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 SLC29A4Q7RTT9 530 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 SLC46A3Q7Z3Q1 461 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 BMP8AQ7Z5Y6 402 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 CDK20Q8IZL9 346 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 CADM3Q8N126 398 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 CYP4Z2PQ8N1L4 340 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 ZNF441Q8N8Z8 693 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 ZNF527Q8NB42 609 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 TBC1D15Q8TC07 691 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 C3orf49Q96BT1 292 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 OMA1Q96E52 524 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 SH3YL1Q96HL8 342 aaPredicted RBP8.42□□□□□ -1.06
ATG4A-202ENST00000345734 PLEKHA8Q96JA3 519 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 MEGF10Q96KG7 1140 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 TNFRSF13CQ96RJ3 184 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 HINT3Q9NQE9 182 aaKnown RBP8.42□□□□□ -1.06
ATG4A-202ENST00000345734 DCAF16Q9NXF7 216 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 TMEM5Q9Y2B1 443 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 FAM183AA6NL82 134 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 SNTNA6NMZ2 147 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 GTPBP1O00178 669 aaKnown RBP8.42□□□□□ -1.06
ATG4A-202ENST00000345734 SOCS6O14544 535 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 TO15178 435 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 TSPAN2O60636 221 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 TMCC2O75069 709 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 ALOX12BO75342 701 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 RCBTB2O95199 551 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 HMGN1P05114 100 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 CCL4P13236 92 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 ZNF28P17035 718 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 BMP7P18075 431 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 ABCD3P28288 659 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 IL12BP29460 328 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 MPLP40238 635 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 ETV5P41161 510 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 RBM34P42696 430 aaKnown RBP8.42□□□□□ -1.06
ATG4A-202ENST00000345734 ETV1P50549 477 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 DUSP3P51452 185 aaPredicted RBP8.42□□□□□ -1.06
ATG4A-202ENST00000345734 COPZ1P61923 177 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 FHL1Q13642 323 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 ANGPT1Q15389 498 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 TSTQ16762 297 aaKnown RBP8.42□□□□□ -1.06
ATG4A-202ENST00000345734 CEP78Q5JTW2 689 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 OVCH1Q7RTY7 1134 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 CPOQ8IVL8 374 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 CENPSQ8N2Z9 138 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 LRRC17Q8N6Y2 441 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 NFAM1Q8NET5 270 aaPredicted RBP8.42□□□□□ -1.06
ATG4A-202ENST00000345734 OR52L1Q8NGH7 329 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 OTULINQ96BN8 352 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 OPALINQ96PE5 141 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 MGLLQ99685 303 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 BCL7BQ9BQE9 202 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 IFT27Q9BW83 186 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 TEX12Q9BXU0 123 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 PRRG3Q9BZD7 231 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 OR51E2Q9H255 320 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 MED20Q9H944 212 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 MCCC2Q9HCC0 563 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 MRTO4Q9UKD2 239 aaKnown RBP8.42□□□□□ -1.06
ATG4A-202ENST00000345734 DIMT1Q9UNQ2 313 aaKnown RBP8.42□□□□□ -1.06
ATG4A-202ENST00000345734 ERGIC3Q9Y282 383 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 FREM2Q5SZK8 3169 aa8.41□□□□□ -1.06
ATG4A-202ENST00000345734 A0A087WUJ7 227 aa8.41□□□□□ -1.06
ATG4A-202ENST00000345734 VSTM2BA6NLU5 285 aa8.41□□□□□ -1.06
ATG4A-202ENST00000345734 ZNF264O43296 627 aa8.41□□□□□ -1.06
ATG4A-202ENST00000345734 AIREO43918 545 aa8.41□□□□□ -1.06
ATG4A-202ENST00000345734 RAB36O95755 333 aa8.41□□□□□ -1.06
ATG4A-202ENST00000345734 FGF5P12034 268 aa8.41□□□□□ -1.06
ATG4A-202ENST00000345734 MST1P26927 711 aa8.41□□□□□ -1.06
ATG4A-202ENST00000345734 MTNR1AP48039 350 aa8.41□□□□□ -1.06
ATG4A-202ENST00000345734 RGS6P49758 472 aa8.41□□□□□ -1.06
ATG4A-202ENST00000345734 EMP2P54851 167 aa8.41□□□□□ -1.06
ATG4A-202ENST00000345734 CDH11P55287 796 aa8.41□□□□□ -1.06
ATG4A-202ENST00000345734 RNF4P78317 190 aa8.41□□□□□ -1.06
ATG4A-202ENST00000345734 PLBD1Q6P4A8 553 aa8.41□□□□□ -1.06
ATG4A-202ENST00000345734 B3GLCTQ6Y288 498 aa8.41□□□□□ -1.06
ATG4A-202ENST00000345734 OAFQ86UD1 273 aa8.41□□□□□ -1.06
ATG4A-202ENST00000345734 MARCH3Q86UD3 253 aa8.41□□□□□ -1.06
ATG4A-202ENST00000345734 SLCO6A1Q86UG4 719 aa8.41□□□□□ -1.06
ATG4A-202ENST00000345734 ZNF440Q8IYI8 595 aa8.41□□□□□ -1.06
ATG4A-202ENST00000345734 LNX2Q8N448 690 aa8.41□□□□□ -1.06
ATG4A-202ENST00000345734 NANOGP1Q8N7R0 232 aa8.41□□□□□ -1.06
ATG4A-202ENST00000345734 BMPERQ8N8U9 685 aa8.41□□□□□ -1.06
ATG4A-202ENST00000345734 APCDD1LQ8NCL9 501 aa8.41□□□□□ -1.06
ATG4A-202ENST00000345734 C7orf57Q8NEG2 295 aa8.41□□□□□ -1.06
ATG4A-202ENST00000345734 OR4F15Q8NGB8 312 aa8.41□□□□□ -1.06
ATG4A-202ENST00000345734 DNAJA4Q8WW22 397 aaPredicted RBP8.41□□□□□ -1.06
ATG4A-202ENST00000345734 C8orf44Q96CB5 159 aa8.41□□□□□ -1.06
ATG4A-202ENST00000345734 WDR77Q9BQA1 342 aaPredicted RBP8.41□□□□□ -1.06
ATG4A-202ENST00000345734 TAPBPLQ9BX59 468 aa8.41□□□□□ -1.06
ATG4A-202ENST00000345734 RNF167Q9H6Y7 350 aa8.41□□□□□ -1.06
ATG4A-202ENST00000345734 MRPS18AQ9NVS2 196 aaKnown RBP8.41□□□□□ -1.06
ATG4A-202ENST00000345734 EMC9Q9Y3B6 208 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms