RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 A0A0B4J293 547 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 SERINC4A6NH21 518 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 HMX3A6NHT5 357 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 EFCAB7A8K855 629 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 A8MV72 311 aaPredicted RBP13.73□□□□□ -0.21
TPM3-208ENST00000341485 FAM25AB3EWG3 89 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 FAM25CB3EWG5 89 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 FAM25GB3EWG6 89 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 MCIDASD6RGH6 385 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 NDUFB2O95178 105 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 CSTAP01040 98 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 CLPSP04118 112 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 ELK1P19419 428 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 MAP2K3P46734 347 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 PSMD4P55036 377 aaKnown RBP13.73□□□□□ -0.21
TPM3-208ENST00000341485 TAS2R43P59537 309 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 IFITM2Q01629 132 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 FUT7Q11130 342 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 ZSWIM7Q19AV6 140 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 PHF19Q5T6S3 580 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 C1orf189Q5VU69 101 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 LRRC17Q8N6Y2 441 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 FAM98AQ8NCA5 519 aaKnown RBP13.73□□□□□ -0.21
TPM3-208ENST00000341485 OR4K13Q8NH42 304 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 ABHD4Q8TB40 342 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 ZMYND19Q96E35 227 aaPredicted RBP13.73□□□□□ -0.21
TPM3-208ENST00000341485 RNF31Q96EP0 1072 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 OR6C1Q96RD1 312 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 RNF121Q9H920 327 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 ZNF304Q9HCX3 659 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 MKKSQ9NPJ1 570 aaPredicted RBP13.73□□□□□ -0.21
TPM3-208ENST00000341485 ICAM5Q9UMF0 924 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 N6AMT1Q9Y5N5 214 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 IER3IP1Q9Y5U9 82 aa13.73□□□□□ -0.21
TPM3-208ENST00000341485 A0A087WUJ7 227 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 A0A1B0GX78 115 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 LDOC1O95751 146 aaPredicted RBP13.72□□□□□ -0.21
TPM3-208ENST00000341485 TFP02787 698 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 IFNA16P05015 189 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 MYL9P24844 172 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 THBS2P35442 1172 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 ACVR1BP36896 505 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 DDOSTP39656 456 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 GRK6P43250 576 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 GPR143P51810 404 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 HCCSP53701 268 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 OR10A3P58181 314 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 ACTC1P68032 377 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 ACTA1P68133 377 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 POU4F2Q12837 409 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 TRAM1Q15629 374 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 ARHGAP40Q5TG30 622 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 DMKNQ6E0U4 476 aaPredicted RBP13.72□□□□□ -0.21
TPM3-208ENST00000341485 IL20RBQ6UXL0 311 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 TRILQ7L0X0 811 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 CEACAM19Q7Z692 300 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 CMIPQ8IY22 773 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 ZNF615Q8N8J6 731 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 ZSCAN1Q8NBB4 408 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 C19orf18Q8NEA5 215 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 ENKURQ8TC29 256 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 TMEM43Q9BTV4 400 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 TTTY10Q9BZA0 68 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 ST6GALNAC2Q9UJ37 374 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 SRPK3Q9UPE1 567 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 OR10H1Q9Y4A9 318 aa13.72□□□□□ -0.21
TPM3-208ENST00000341485 GALR2O43603 387 aaPredicted RBP13.71□□□□□ -0.21
TPM3-208ENST00000341485 PRKNO60260 465 aaPredicted RBP13.71□□□□□ -0.21
TPM3-208ENST00000341485 SC5DO75845 299 aa13.71□□□□□ -0.21
TPM3-208ENST00000341485 ZNF883P0CG24 379 aa13.71□□□□□ -0.21
TPM3-208ENST00000341485 TRAPPC2P0DI81 140 aa13.71□□□□□ -0.21
TPM3-208ENST00000341485 TRAPPC2BP0DI82 140 aa13.71□□□□□ -0.21
TPM3-208ENST00000341485 PYCR1P32322 319 aa13.71□□□□□ -0.21
TPM3-208ENST00000341485 SERTAD2Q14140 314 aa13.71□□□□□ -0.21
TPM3-208ENST00000341485 CLPPQ16740 277 aaPredicted RBP13.71□□□□□ -0.21
TPM3-208ENST00000341485 TBRG1Q3YBR2 411 aa13.71□□□□□ -0.21
TPM3-208ENST00000341485 PXKQ7Z7A4 578 aa13.71□□□□□ -0.21
TPM3-208ENST00000341485 GLCCI1Q86VQ1 547 aa13.71□□□□□ -0.21
TPM3-208ENST00000341485 FRMD6Q96NE9 622 aa13.71□□□□□ -0.21
TPM3-208ENST00000341485 OR1F2PQ96R84 312 aa13.71□□□□□ -0.21
TPM3-208ENST00000341485 LMF1Q96S06 567 aa13.71□□□□□ -0.21
TPM3-208ENST00000341485 EXTL2Q9UBQ6 330 aa13.71□□□□□ -0.21
TPM3-208ENST00000341485 KLHL21Q9UJP4 597 aa13.71□□□□□ -0.21
TPM3-208ENST00000341485 RARRES3Q9UL19 164 aa13.71□□□□□ -0.21
TPM3-208ENST00000341485 ADAM18Q9Y3Q7 739 aa13.71□□□□□ -0.21
TPM3-208ENST00000341485 KMT2EQ8IZD2 1858 aa13.71□□□□□ -0.21
TPM3-208ENST00000341485 A0A0G2JK05 382 aa13.71□□□□□ -0.21
TPM3-208ENST00000341485 MAGEB4O15481 346 aaPredicted RBP13.71□□□□□ -0.21
TPM3-208ENST00000341485 FAM157BP0CG42 384 aa13.71□□□□□ -0.21
TPM3-208ENST00000341485 QPRTQ15274 297 aa13.71□□□□□ -0.21
TPM3-208ENST00000341485 SF3B4Q15427 424 aaKnown RBP eCLIP13.71□□□□□ -0.211e-13■■□□□ 12.6
TPM3-208ENST00000341485 GXYLT1Q4G148 440 aa13.71□□□□□ -0.21
TPM3-208ENST00000341485 TP53I3Q53FA7 332 aa13.71□□□□□ -0.21
TPM3-208ENST00000341485 OR51L1Q8NGJ5 315 aa13.71□□□□□ -0.21
TPM3-208ENST00000341485 OR13C5Q8NGS8 318 aa13.71□□□□□ -0.21
TPM3-208ENST00000341485 RHBDD1Q8TEB9 315 aa13.71□□□□□ -0.21
TPM3-208ENST00000341485 CAPSLQ8WWF8 208 aa13.71□□□□□ -0.21
TPM3-208ENST00000341485 C3orf49Q96BT1 292 aa13.71□□□□□ -0.21
TPM3-208ENST00000341485 ZC3HAV1LQ96H79 300 aaKnown RBP13.71□□□□□ -0.21
TPM3-208ENST00000341485 UBL7Q96S82 380 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms