RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 TMEM204Q9BSN7 226 aa11.8□□□□□ -0.52
SIRPB3P-201ENST00000340424 TRIM2Q9C040 744 aa11.8□□□□□ -0.52
SIRPB3P-201ENST00000340424 ESRP2Q9H6T0 727 aaKnown RBP11.8□□□□□ -0.52
SIRPB3P-201ENST00000340424 RPS6KB2Q9UBS0 482 aa11.8□□□□□ -0.52
SIRPB3P-201ENST00000340424 MALT1Q9UDY8 824 aa11.8□□□□□ -0.52
SIRPB3P-201ENST00000340424 TESQ9UGI8 421 aaKnown RBP11.8□□□□□ -0.52
SIRPB3P-201ENST00000340424 PRSS50Q9UI38 385 aa11.8□□□□□ -0.52
SIRPB3P-201ENST00000340424 SLC13A4Q9UKG4 626 aa11.8□□□□□ -0.52
SIRPB3P-201ENST00000340424 MAP1AP78559 2803 aaPredicted RBP11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 ZC3H12DA2A288 527 aaKnown RBP11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 AQP7P3A6NL99 342 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 TMEM229AB2RXF0 380 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 NPIPB7O75200 414 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 PNMTP11086 282 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 PRG2P13727 222 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 GGT1P19440 569 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 KLK2P20151 261 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 NCALDP61601 193 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 CEACAM7Q14002 265 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 SLC17A1Q14916 467 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 MAPRE2Q15555 327 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 TAB1Q15750 504 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 ADRM1Q16186 407 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 CYP51A1Q16850 503 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 OTUD3Q5T2D3 398 aaPredicted RBP11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 C1orf140Q5VVS0 124 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 FAM91A1Q658Y4 838 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 OR7E24Q6IFN5 339 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 ZNF704Q6ZNC4 412 aaPredicted RBP11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 CCDC103Q8IW40 242 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 LRRC75A-AS1Q8N1F1 130 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 UBE2J2Q8N2K1 259 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 TMEM45BQ96B21 275 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 MUCL1Q96DR8 90 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 PLPPR2Q96GM1 343 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 SH3GL1Q99961 368 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 TMEM120AQ9BXJ8 343 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 IKZF5Q9H5V7 419 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 UBTD1Q9HAC8 227 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 ASB6Q9NWX5 421 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 TAS2R16Q9NYV7 291 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 FLVCR1Q9Y5Y0 555 aa11.79□□□□□ -0.52
SIRPB3P-201ENST00000340424 TEP1Q99973 2627 aaKnown RBP11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 PRRC2AP48634 2157 aaKnown RBP11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 ZNF469Q96JG9 3925 aaPredicted RBP11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 ELOA3DA6NLF2 546 aaPredicted RBP11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 CCT8L1PA6NM43 557 aa11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 BBIP1A8MTZ0 92 aa11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 FRS3O43559 492 aa11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 AHSA1O95433 338 aa11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 NPPAP01160 153 aa11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 IGHV1-2P23083 117 aa11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 ADSLP30566 484 aaPredicted RBP11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 ARFIP2P53365 341 aa11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 NFYCQ13952 458 aa11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 PPA1Q15181 289 aa11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 OR7A5Q15622 319 aa11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 TRMT5Q32P41 509 aaKnown RBP11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 ELOA3BQ3SY89 546 aa11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 SHEQ5VZ18 495 aa11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 ADAM5Q6NVV9 412 aa11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 ULK3Q6PHR2 472 aa11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 NET1Q7Z628 596 aaPredicted RBP11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 CPLX4Q7Z7G2 160 aa11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 ARMC8Q8IUR7 673 aa11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 C10orf111Q8N326 155 aa11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 ANKS4BQ8N8V4 417 aa11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 C1orf162Q8NEQ5 155 aaPredicted RBP11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 ELOA3Q8NG57 546 aa11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 MFSD8Q8NHS3 518 aa11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 ZNF775Q96BV0 537 aaPredicted RBP11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 CCL19Q99731 98 aa11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 KAT8Q9H7Z6 458 aaKnown RBP11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 SELENONQ9NZV5 590 aa11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 RASD1Q9Y272 281 aa11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 RNF115Q9Y4L5 304 aa11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 FREM1Q5H8C1 2179 aa11.78□□□□□ -0.52
SIRPB3P-201ENST00000340424 OR6C65A6NJZ3 312 aa11.77□□□□□ -0.53
SIRPB3P-201ENST00000340424 OR5H1A6NKK0 313 aa11.77□□□□□ -0.53
SIRPB3P-201ENST00000340424 SLC22A2O15244 555 aa11.77□□□□□ -0.53
SIRPB3P-201ENST00000340424 ARHGEF9O43307 516 aa11.77□□□□□ -0.53
SIRPB3P-201ENST00000340424 OR2T1O43869 369 aa11.77□□□□□ -0.53
SIRPB3P-201ENST00000340424 FMO6PO60774 539 aa11.77□□□□□ -0.53
SIRPB3P-201ENST00000340424 SMPD2O60906 423 aa11.77□□□□□ -0.53
SIRPB3P-201ENST00000340424 FZD7O75084 574 aa11.77□□□□□ -0.53
SIRPB3P-201ENST00000340424 LYZL6O75951 148 aa11.77□□□□□ -0.53
SIRPB3P-201ENST00000340424 C8BP07358 591 aa11.77□□□□□ -0.53
SIRPB3P-201ENST00000340424 CD3EP07766 207 aa11.77□□□□□ -0.53
SIRPB3P-201ENST00000340424 VIMP08670 466 aaKnown RBP11.77□□□□□ -0.53
SIRPB3P-201ENST00000340424 CD99P14209 185 aa11.77□□□□□ -0.53
SIRPB3P-201ENST00000340424 GTF2E2P29084 291 aaKnown RBP11.77□□□□□ -0.53
SIRPB3P-201ENST00000340424 PCBP3P57721 371 aaKnown RBP11.77□□□□□ -0.53
SIRPB3P-201ENST00000340424 RGS8P57771 180 aaPredicted RBP11.77□□□□□ -0.53
SIRPB3P-201ENST00000340424 TGFBR3Q03167 851 aa11.77□□□□□ -0.53
SIRPB3P-201ENST00000340424 CYLC2Q14093 348 aaPredicted RBP11.77□□□□□ -0.53
SIRPB3P-201ENST00000340424 CAPRIN1Q14444 709 aaKnown RBP11.77□□□□□ -0.53
SIRPB3P-201ENST00000340424 STK11Q15831 433 aa11.77□□□□□ -0.53
SIRPB3P-201ENST00000340424 NCMAPQ5T1S8 102 aa11.77□□□□□ -0.53
SIRPB3P-201ENST00000340424 INTS11Q5TA45 600 aaKnown RBP11.77□□□□□ -0.53
SIRPB3P-201ENST00000340424 TMEM225Q6GV28 225 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms