RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 ATP1A4Q13733 1029 aa14.01□□□□□ -0.17
LIMS1-202ENST00000338045 PLPPR5Q32ZL2 321 aa14.01□□□□□ -0.17
LIMS1-202ENST00000338045 C1QL3Q5VWW1 255 aa14.01□□□□□ -0.17
LIMS1-202ENST00000338045 POMZP3Q6PJE2 187 aa14.01□□□□□ -0.17
LIMS1-202ENST00000338045 GID4Q8IVV7 300 aa14.01□□□□□ -0.17
LIMS1-202ENST00000338045 ALDH16A1Q8IZ83 802 aa14.01□□□□□ -0.17
LIMS1-202ENST00000338045 C10orf53Q8N6V4 93 aa14.01□□□□□ -0.17
LIMS1-202ENST00000338045 BBS1Q8NFJ9 593 aa14.01□□□□□ -0.17
LIMS1-202ENST00000338045 OR52I1Q8NGK6 324 aa14.01□□□□□ -0.17
LIMS1-202ENST00000338045 OR6S1Q8NH40 331 aa14.01□□□□□ -0.17
LIMS1-202ENST00000338045 ADAMTS14Q8WXS8 1223 aa14.01□□□□□ -0.17
LIMS1-202ENST00000338045 LGALS12Q96DT0 336 aa14.01□□□□□ -0.17
LIMS1-202ENST00000338045 MRGPRX4Q96LA9 322 aa14.01□□□□□ -0.17
LIMS1-202ENST00000338045 IP6K3Q96PC2 410 aa14.01□□□□□ -0.17
LIMS1-202ENST00000338045 ERMAPQ96PL5 475 aaPredicted RBP14.01□□□□□ -0.17
LIMS1-202ENST00000338045 NPAS1Q99742 590 aa14.01□□□□□ -0.17
LIMS1-202ENST00000338045 ASCL3Q9NQ33 180 aa14.01□□□□□ -0.17
LIMS1-202ENST00000338045 HPF1Q9NWY4 346 aa14.01□□□□□ -0.17
LIMS1-202ENST00000338045 IL17BQ9UHF5 180 aa14.01□□□□□ -0.17
LIMS1-202ENST00000338045 RABL2BQ9UNT1 228 aa14.01□□□□□ -0.17
LIMS1-202ENST00000338045 FAM183AA6NL82 134 aa14□□□□□ -0.17
LIMS1-202ENST00000338045 RIIAD1A6NNX1 92 aa14□□□□□ -0.17
LIMS1-202ENST00000338045 IDH3BO43837 385 aa14□□□□□ -0.17
LIMS1-202ENST00000338045 ATP6V1G1O75348 118 aa14□□□□□ -0.17
LIMS1-202ENST00000338045 TRMUO75648 421 aaKnown RBP14□□□□□ -0.17
LIMS1-202ENST00000338045 CCL3P10147 92 aa14□□□□□ -0.17
LIMS1-202ENST00000338045 RBMS1P29558 406 aaKnown RBP14□□□□□ -0.17
LIMS1-202ENST00000338045 TMBIM6P55061 237 aa14□□□□□ -0.17
LIMS1-202ENST00000338045 FOXF1Q12946 379 aa14□□□□□ -0.17
LIMS1-202ENST00000338045 ITGADQ13349 1161 aa14□□□□□ -0.17
LIMS1-202ENST00000338045 INPP5JQ15735 1006 aaPredicted RBP14□□□□□ -0.17
LIMS1-202ENST00000338045 GXYLT1Q4G148 440 aa14□□□□□ -0.17
LIMS1-202ENST00000338045 FAM69AQ5T7M9 428 aa14□□□□□ -0.17
LIMS1-202ENST00000338045 ZNF468Q5VIY5 522 aaPredicted RBP14□□□□□ -0.17
LIMS1-202ENST00000338045 PRAMEF20Q5VT98 475 aa14□□□□□ -0.17
LIMS1-202ENST00000338045 C1orf140Q5VVS0 124 aa14□□□□□ -0.17
LIMS1-202ENST00000338045 JMJD6Q6NYC1 403 aaPredicted RBP14□□□□□ -0.17
LIMS1-202ENST00000338045 NIPAL3Q6P499 406 aa14□□□□□ -0.17
LIMS1-202ENST00000338045 PLBD1Q6P4A8 553 aa14□□□□□ -0.17
LIMS1-202ENST00000338045 ASCL5Q7RTU5 278 aa14□□□□□ -0.17
LIMS1-202ENST00000338045 IL22RA1Q8N6P7 574 aa14□□□□□ -0.17
LIMS1-202ENST00000338045 MOSPD2Q8NHP6 518 aa14□□□□□ -0.17
LIMS1-202ENST00000338045 PTP4A1Q93096 173 aa14□□□□□ -0.17
LIMS1-202ENST00000338045 RNFT2Q96EX2 444 aa14□□□□□ -0.17
LIMS1-202ENST00000338045 TAS2R16Q9NYV7 291 aa14□□□□□ -0.17
LIMS1-202ENST00000338045 IER3IP1Q9Y5U9 82 aa14□□□□□ -0.17
LIMS1-202ENST00000338045 DMXL1Q9Y485 3027 aa14□□□□□ -0.17
LIMS1-202ENST00000338045 TRIM64BA6NI03 449 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 ZNF208O43345 1280 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 IFNGP01579 166 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 ZNF3P17036 446 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 PSMB9P28065 219 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 NOS3P29474 1203 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 AQP2P41181 271 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 ZNF41P51814 821 aaPredicted RBP13.99□□□□□ -0.17
LIMS1-202ENST00000338045 CRMP1Q14194 572 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 ACER2Q5QJU3 275 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 SLC22A10Q63ZE4 541 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 B3GNTL1Q67FW5 361 aaPredicted RBP13.99□□□□□ -0.17
LIMS1-202ENST00000338045 IGFN1Q86VF2 1251 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 GALNT15Q8N3T1 639 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 C12orf43Q96C57 262 aaKnown RBP13.99□□□□□ -0.17
LIMS1-202ENST00000338045 NMD3Q96D46 503 aaKnown RBP13.99□□□□□ -0.17
LIMS1-202ENST00000338045 YIPF6Q96EC8 236 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 C1GALT1C1Q96EU7 318 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 FUNDC2Q9BWH2 189 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 HCAR1Q9BXC0 346 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 YIPF3Q9GZM5 350 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 NAA50Q9GZZ1 169 aaKnown RBP13.99□□□□□ -0.17
LIMS1-202ENST00000338045 WDR70Q9NW82 654 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 H2AFY2Q9P0M6 372 aaPredicted RBP13.99□□□□□ -0.17
LIMS1-202ENST00000338045 KLHL21Q9UJP4 597 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 FBXL2Q9UKC9 423 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 VDAC3Q9Y277 283 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 RIF1Q5UIP0 2472 aaKnown RBP13.99□□□□□ -0.17
LIMS1-202ENST00000338045 PRR23D1E9PI22 279 aaPredicted RBP13.99□□□□□ -0.17
LIMS1-202ENST00000338045 BLOC1S5-TXNDC5H3BN57 136 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 M0R082 166 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 M0R3G1 203 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 RAB36O95755 333 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 CD14P08571 375 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 PRR23D2P0DMB1 279 aaPredicted RBP13.99□□□□□ -0.17
LIMS1-202ENST00000338045 HIST1H1CP16403 213 aaKnown RBP13.99□□□□□ -0.17
LIMS1-202ENST00000338045 RPL4P36578 427 aaKnown RBP13.99□□□□□ -0.17
LIMS1-202ENST00000338045 ALG10Q5BKT4 473 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 B3GNT6Q6ZMB0 384 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 MEPCEQ7L2J0 689 aaKnown RBP13.99□□□□□ -0.17
LIMS1-202ENST00000338045 ZNF367Q7RTV3 350 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 TMPRSS7Q7RTY8 843 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 FAM122BQ7Z309 247 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 NANOGNBQ7Z5D8 188 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 PLCZ1Q86YW0 608 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 GPALPP1Q8IXQ4 340 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 SIRT6Q8N6T7 355 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 SLC37A3Q8NCC5 494 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 POC1BQ8TC44 478 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 DDOQ99489 341 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 KATNB1Q9BVA0 655 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 PTTG2Q9NZH5 202 aa13.99□□□□□ -0.17
LIMS1-202ENST00000338045 WARS2Q9UGM6 360 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms