RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 BIRC5O15392 142 aa21.28■■□□□ 1
CDKN3-202ENST00000335183 GKN3PP0CG01 181 aa21.28■■□□□ 1
CDKN3-202ENST00000335183 RPS4Y1P22090 263 aaKnown RBP21.28■■□□□ 1
CDKN3-202ENST00000335183 GZMKP49863 264 aa21.28■■□□□ 1
CDKN3-202ENST00000335183 SNRPD2P62316 118 aaKnown RBP21.28■■□□□ 1
CDKN3-202ENST00000335183 SWI5Q1ZZU3 235 aa21.28■■□□□ 1
CDKN3-202ENST00000335183 MST1LQ2TV78 715 aa21.28■■□□□ 1
CDKN3-202ENST00000335183 COX20Q5RI15 118 aa21.28■■□□□ 1
CDKN3-202ENST00000335183 C1QTNF12Q5T7M4 302 aa21.28■■□□□ 1
CDKN3-202ENST00000335183 IL17RELQ6ZVW7 336 aa21.28■■□□□ 1
CDKN3-202ENST00000335183 ABHD12BQ7Z5M8 362 aaPredicted RBP21.28■■□□□ 1
CDKN3-202ENST00000335183 VRK1Q99986 396 aaPredicted RBP21.28■■□□□ 1
CDKN3-202ENST00000335183 SF3B5Q9BWJ5 86 aaKnown RBP21.28■■□□□ 1
CDKN3-202ENST00000335183 ADAM19Q9H013 955 aa21.28■■□□□ 1
CDKN3-202ENST00000335183 RLIMQ9NVW2 624 aa21.28■■□□□ 1
CDKN3-202ENST00000335183 ADPRHL2Q9NX46 363 aa21.28■■□□□ 1
CDKN3-202ENST00000335183 KCNS2Q9ULS6 477 aa21.28■■□□□ 1
CDKN3-202ENST00000335183 AQP7P3A6NL99 342 aa21.27■■□□□ 1
CDKN3-202ENST00000335183 ALDOCP09972 364 aaKnown RBP21.27■■□□□ 1
CDKN3-202ENST00000335183 BGNP21810 368 aa21.27■■□□□ 1
CDKN3-202ENST00000335183 IGFBP5P24593 272 aa21.27■■□□□ 1
CDKN3-202ENST00000335183 TXNL4AP83876 142 aaKnown RBP21.27■■□□□ 1
CDKN3-202ENST00000335183 BNIP2Q12982 314 aa21.27■■□□□ 1
CDKN3-202ENST00000335183 GSTA3Q16772 222 aa21.27■■□□□ 1
CDKN3-202ENST00000335183 KRTAP24-1Q3LI83 254 aa21.27■■□□□ 1
CDKN3-202ENST00000335183 KRT71Q3SY84 523 aa21.27■■□□□ 1
CDKN3-202ENST00000335183 TMEM225Q6GV28 225 aa21.27■■□□□ 1
CDKN3-202ENST00000335183 PEX5LQ8IYB4 626 aa21.27■■□□□ 1
CDKN3-202ENST00000335183 ZNF440Q8IYI8 595 aa21.27■■□□□ 1
CDKN3-202ENST00000335183 LRRC34Q8IZ02 419 aa21.27■■□□□ 1
CDKN3-202ENST00000335183 CADM2Q8N3J6 435 aa21.27■■□□□ 1
CDKN3-202ENST00000335183 AENQ8WTP8 325 aaKnown RBP21.27■■□□□ 1
CDKN3-202ENST00000335183 OR52E6Q96RD3 313 aa21.27■■□□□ 1
CDKN3-202ENST00000335183 TAPBPLQ9BX59 468 aa21.27■■□□□ 1
CDKN3-202ENST00000335183 MEAF6Q9HAF1 191 aa21.27■■□□□ 1
CDKN3-202ENST00000335183 PNPOQ9NVS9 261 aa21.27■■□□□ 1
CDKN3-202ENST00000335183 TMEM45AQ9NWC5 275 aa21.27■■□□□ 1
CDKN3-202ENST00000335183 IGHV1-18A0A0C4DH31 117 aa21.26■□□□□ 0.99
CDKN3-202ENST00000335183 VWC2LB2RUY7 222 aa21.26■□□□□ 0.99
CDKN3-202ENST00000335183 SNUPNO95149 360 aaKnown RBP21.26■□□□□ 0.99
CDKN3-202ENST00000335183 LGI1O95970 557 aa21.26■□□□□ 0.99
CDKN3-202ENST00000335183 PGRP06401 933 aa21.26■□□□□ 0.99
CDKN3-202ENST00000335183 SRD5A1P18405 259 aa21.26■□□□□ 0.99
CDKN3-202ENST00000335183 IL12AP29459 219 aa21.26■□□□□ 0.99
CDKN3-202ENST00000335183 LGALS3BPQ08380 585 aa21.26■□□□□ 0.99
CDKN3-202ENST00000335183 TBRG1Q3YBR2 411 aa21.26■□□□□ 0.99
CDKN3-202ENST00000335183 FAM166AQ6J272 317 aa21.26■□□□□ 0.99
CDKN3-202ENST00000335183 SLC46A3Q7Z3Q1 461 aa21.26■□□□□ 0.99
CDKN3-202ENST00000335183 VRK2Q86Y07 508 aa21.26■□□□□ 0.99
CDKN3-202ENST00000335183 KIRREL3Q8IZU9 778 aa21.26■□□□□ 0.99
CDKN3-202ENST00000335183 ANKS4BQ8N8V4 417 aa21.26■□□□□ 0.99
CDKN3-202ENST00000335183 OR1K1Q8NGR3 316 aa21.26■□□□□ 0.99
CDKN3-202ENST00000335183 TRIM44Q96DX7 344 aaPredicted RBP21.26■□□□□ 0.99
CDKN3-202ENST00000335183 SLC38A2Q96QD8 506 aa21.26■□□□□ 0.99
CDKN3-202ENST00000335183 OBP2BQ9NPH6 170 aa21.26■□□□□ 0.99
CDKN3-202ENST00000335183 LOC100289279A0A1B0GTE1 492 aa21.25■□□□□ 0.99
CDKN3-202ENST00000335183 ZNF587BE7ETH6 402 aa21.25■□□□□ 0.99
CDKN3-202ENST00000335183 NDUFS8O00217 210 aa21.25■□□□□ 0.99
CDKN3-202ENST00000335183 RGS16O15492 202 aaPredicted RBP21.25■□□□□ 0.99
CDKN3-202ENST00000335183 APEHP13798 732 aaKnown RBP21.25■□□□□ 0.99
CDKN3-202ENST00000335183 NR4A2P43354 598 aa21.25■□□□□ 0.99
CDKN3-202ENST00000335183 SELENOPP49908 381 aa21.25■□□□□ 0.99
CDKN3-202ENST00000335183 UBE2NP61088 152 aaKnown RBP21.25■□□□□ 0.99
CDKN3-202ENST00000335183 COPZ1P61923 177 aa21.25■□□□□ 0.99
CDKN3-202ENST00000335183 OGFOD2Q6N063 350 aa21.25■□□□□ 0.99
CDKN3-202ENST00000335183 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.25■□□□□ 0.994e-9■■■■■ 29.4
CDKN3-202ENST00000335183 ZNF836Q6ZNA1 936 aa21.25■□□□□ 0.99
CDKN3-202ENST00000335183 SPATA19Q7Z5L4 167 aa21.25■□□□□ 0.99
CDKN3-202ENST00000335183 ALKBH3Q96Q83 286 aaPredicted RBP21.25■□□□□ 0.99
CDKN3-202ENST00000335183 TMEM109Q9BVC6 243 aa21.25■□□□□ 0.99
CDKN3-202ENST00000335183 AIG1Q9NVV5 245 aa21.25■□□□□ 0.99
CDKN3-202ENST00000335183 SLC35F4A4IF30 521 aa21.24■□□□□ 0.99
CDKN3-202ENST00000335183 CDHR4A6H8M9 788 aa21.24■□□□□ 0.99
CDKN3-202ENST00000335183 TM9SF1O15321 606 aa21.24■□□□□ 0.99
CDKN3-202ENST00000335183 CRYAAP02489 173 aa21.24■□□□□ 0.99
CDKN3-202ENST00000335183 SERPINF1P36955 418 aa21.24■□□□□ 0.99
CDKN3-202ENST00000335183 SRSF2Q01130 221 aaKnown RBP21.24■□□□□ 0.99
CDKN3-202ENST00000335183 STX3Q13277 289 aa21.24■□□□□ 0.99
CDKN3-202ENST00000335183 IQCCQ4KMZ1 466 aa21.24■□□□□ 0.99
CDKN3-202ENST00000335183 LIN52Q52LA3 116 aa21.24■□□□□ 0.99
CDKN3-202ENST00000335183 WBP2NLQ6ICG8 309 aa21.24■□□□□ 0.99
CDKN3-202ENST00000335183 NIPAL3Q6P499 406 aa21.24■□□□□ 0.99
CDKN3-202ENST00000335183 VHLLQ6RSH7 139 aa21.24■□□□□ 0.99
CDKN3-202ENST00000335183 OR52P1PQ8NH57 321 aa21.24■□□□□ 0.99
CDKN3-202ENST00000335183 FOXN4Q96NZ1 517 aa21.24■□□□□ 0.99
CDKN3-202ENST00000335183 ZBTB18Q99592 522 aa21.24■□□□□ 0.99
CDKN3-202ENST00000335183 PRR14Q9BWN1 585 aa21.24■□□□□ 0.99
CDKN3-202ENST00000335183 PIF1Q9H611 641 aa21.24■□□□□ 0.99
CDKN3-202ENST00000335183 CA10Q9NS85 328 aa21.24■□□□□ 0.99
CDKN3-202ENST00000335183 P2RX2Q9UBL9 471 aa21.24■□□□□ 0.99
CDKN3-202ENST00000335183 HAO1Q9UJM8 370 aa21.24■□□□□ 0.99
CDKN3-202ENST00000335183 A8MVM7 634 aa21.23■□□□□ 0.99
CDKN3-202ENST00000335183 NR5A2O00482 541 aa21.23■□□□□ 0.99
CDKN3-202ENST00000335183 FRS3O43559 492 aa21.23■□□□□ 0.99
CDKN3-202ENST00000335183 KRT75O95678 551 aa21.23■□□□□ 0.99
CDKN3-202ENST00000335183 ACAA2P42765 397 aaKnown RBP21.23■□□□□ 0.99
CDKN3-202ENST00000335183 TUBA1BP68363 451 aa21.23■□□□□ 0.99
CDKN3-202ENST00000335183 TUBA4AP68366 448 aa21.23■□□□□ 0.99
CDKN3-202ENST00000335183 LRRC74AQ0VAA2 488 aa21.23■□□□□ 0.99
CDKN3-202ENST00000335183 FAM120AOSQ5T036 256 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms