RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 NRIP3Q9NQ35 241 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 POT1Q9NUX5 634 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 C17orf113A0A1B0GUU1 675 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 OR6C74A6NCV1 312 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 CTDSPLO15194 276 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 GALR3O60755 368 aaPredicted RBP12.66□□□□□ -0.38
SYNE3-201ENST00000334258 ZIC2O95409 532 aaPredicted RBP12.66□□□□□ -0.38
SYNE3-201ENST00000334258 HIST1H2ABP04908 130 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 TRA2BP62995 288 aaKnown RBP12.66□□□□□ -0.38
SYNE3-201ENST00000334258 ACTC1P68032 377 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 ACTA1P68133 377 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 SIRPAP78324 504 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 PRAMEF8Q5VWM4 474 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 PRAMEF7Q5VXH5 474 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 HIST3H2AQ7L7L0 130 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 ZNF614Q8N883 585 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 SYNPRQ8TBG9 265 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 GRHL3Q8TE85 626 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 HIST1H2ACQ93077 130 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 MOAP1Q96BY2 351 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 LRRC46Q96FV0 321 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 SPOCK3Q9BQ16 436 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 C6orf106Q9H6K1 298 aaPredicted RBP12.66□□□□□ -0.38
SYNE3-201ENST00000334258 MTHFD2LQ9H903 347 aaPredicted RBP12.66□□□□□ -0.38
SYNE3-201ENST00000334258 TAS2R3Q9NYW6 316 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 GOSR2O14653 212 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 C6P13671 934 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 IL9P15248 144 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 CEBPBP17676 345 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 SRMP19623 302 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 ST8SIA6P61647 398 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 BOLLQ8N9W6 283 aaKnown RBP12.66□□□□□ -0.38
SYNE3-201ENST00000334258 TEX19Q8NA77 164 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 CLRN3Q8NCR9 226 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 PELI1Q96FA3 418 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 MFFQ9GZY8 342 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 TINAGQ9UJW2 476 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 A0A1B0GW55 424 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 DUXAA6NLW8 204 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 CLEC3AO75596 197 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 SLC35G4P0C7Q5 338 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 DUX4L2P0CJ85 424 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 DUX4L3P0CJ86 424 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 DUX4L4P0CJ87 422 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 DUX4L5P0CJ88 424 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 DUX4L6P0CJ89 424 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 DUX4L7P0CJ90 424 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 CPN1P15169 458 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 C1orf53Q5VUE5 145 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 ZNF626Q68DY1 528 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 WDR88Q6ZMY6 472 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 ZNF836Q6ZNA1 936 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 OR52E2Q8NGJ4 325 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 OR4K13Q8NH42 304 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 SMIM19Q96E16 107 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 NPAS1Q99742 590 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 EVA1AQ9H8M9 152 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 ZNF275Q9NSD4 429 aaPredicted RBP12.65□□□□□ -0.38
SYNE3-201ENST00000334258 MED9Q9NWA0 146 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 CLDND1Q9NY35 253 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 DUX4Q9UBX2 424 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 ST6GALNAC2Q9UJ37 374 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 MRPS23Q9Y3D9 190 aaKnown RBP12.65□□□□□ -0.38
SYNE3-201ENST00000334258 TRBV23-1A0A0A0MS06 115 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 NPIPA5A0A0B4J1W7 369 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 CENPVL1A0A0U1RR11 272 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 NPIPA7E9PJI5 369 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 PYCARD-AS1I3L0S3 204 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 IGF2P01344 180 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 NPIPA8P0DM63 369 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 CDK5R1Q15078 307 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 LRRN1Q6UXK5 716 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 HSD17B13Q7Z5P4 300 aaPredicted RBP12.65□□□□□ -0.38
SYNE3-201ENST00000334258 CDH26Q8IXH8 852 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 OR5K2Q8NHB8 316 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 MRTO4Q9UKD2 239 aaKnown RBP12.65□□□□□ -0.38
SYNE3-201ENST00000334258 MED31Q9Y3C7 131 aa12.65□□□□□ -0.38
SYNE3-201ENST00000334258 OTOL1A6NHN0 477 aaPredicted RBP12.64□□□□□ -0.39
SYNE3-201ENST00000334258 FAM74A7A6NL05 159 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 IFITM5A6NNB3 132 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 STARP49675 285 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 ERVK-25P63136 954 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 OR1Q1Q15612 314 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 FAM74A3Q4VXF1 159 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 ELFN2Q5R3F8 820 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 B3GNTL1Q67FW5 361 aaPredicted RBP12.64□□□□□ -0.39
SYNE3-201ENST00000334258 FRRS1Q6ZNA5 592 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 OVCH1Q7RTY7 1134 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 ASPGQ86U10 573 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 RAB42Q8N4Z0 105 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 OR1S1Q8NH92 325 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 CAPN10Q9HC96 672 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 MLXQ9UH92 298 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 OPN4Q9UHM6 478 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 CACNA1CQ13936 2221 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 F5H5P2 479 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 LDOC1O95751 146 aaPredicted RBP12.64□□□□□ -0.39
SYNE3-201ENST00000334258 IFNGP01579 166 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 SORDQ00796 357 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 FAM74A1Q5RGS3 127 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms