RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 HOXB5P09067 269 aa9.7□□□□□ -0.86
SPTBN1-201ENST00000333896 SRYQ05066 204 aa9.7□□□□□ -0.86
SPTBN1-201ENST00000333896 HYAL4Q2M3T9 481 aa9.7□□□□□ -0.86
SPTBN1-201ENST00000333896 SHEQ5VZ18 495 aa9.7□□□□□ -0.86
SPTBN1-201ENST00000333896 PAQR3Q6TCH7 311 aa9.7□□□□□ -0.86
SPTBN1-201ENST00000333896 NAA11Q9BSU3 229 aaPredicted RBP9.7□□□□□ -0.86
SPTBN1-201ENST00000333896 OR51B6Q9H340 312 aa9.7□□□□□ -0.86
SPTBN1-201ENST00000333896 MTCH1Q9NZJ7 389 aa9.7□□□□□ -0.86
SPTBN1-201ENST00000333896 SLCO1B1Q9Y6L6 691 aa9.7□□□□□ -0.86
SPTBN1-201ENST00000333896 LEUTXA8MZ59 168 aa9.7□□□□□ -0.86
SPTBN1-201ENST00000333896 TRHRP34981 398 aaPredicted RBP9.7□□□□□ -0.86
SPTBN1-201ENST00000333896 EMP3P54852 163 aa9.7□□□□□ -0.86
SPTBN1-201ENST00000333896 GPR176Q14439 515 aa9.7□□□□□ -0.86
SPTBN1-201ENST00000333896 HSD17B13Q7Z5P4 300 aaPredicted RBP9.7□□□□□ -0.86
SPTBN1-201ENST00000333896 TRAF4Q9BUZ4 470 aaPredicted RBP9.7□□□□□ -0.86
SPTBN1-201ENST00000333896 METTL9Q9H1A3 318 aa9.7□□□□□ -0.86
SPTBN1-201ENST00000333896 RREB1Q92766 1687 aa9.7□□□□□ -0.86
SPTBN1-201ENST00000333896 TACR2P21452 398 aa9.7□□□□□ -0.86
SPTBN1-201ENST00000333896 GPR50Q13585 617 aa9.7□□□□□ -0.86
SPTBN1-201ENST00000333896 ZNF485Q8NCK3 441 aa9.7□□□□□ -0.86
SPTBN1-201ENST00000333896 IL31RAQ8NI17 732 aa9.7□□□□□ -0.86
SPTBN1-201ENST00000333896 SLC41A2Q96JW4 573 aa9.7□□□□□ -0.86
SPTBN1-201ENST00000333896 C7orf72A4D263 438 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 FAM227AF5H4B4 570 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 SCO2O43819 266 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 IL1RNP18510 177 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 RAET1LQ5VY80 246 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 MAMDC2Q7Z304 686 aaPredicted RBP9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 BPIFCQ8NFQ6 507 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 LMX1AQ8TE12 382 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 OR51M1Q9H341 326 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 NCOR1P1Q9H4R4 102 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 HOXA11P31270 313 aaPredicted RBP9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 NXPE4Q6UWF7 544 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 BTNL8Q6UX41 500 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 KDF1Q8NAX2 398 aaPredicted RBP9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 THAP3Q8WTV1 239 aaPredicted RBP9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 RAB8BQ92930 207 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 SLC6A20Q9NP91 592 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 SLC39A9Q9NUM3 307 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 SLC23A2Q9UGH3 650 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 TRABD2BA6NFA1 517 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 ACP5P13686 325 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 HNRNPA2B1P22626 353 aaKnown RBP9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 PRPS1P60891 318 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 MELKQ14680 651 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 VASNQ6EMK4 673 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 VWA1Q6PCB0 445 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 OPN5Q6U736 354 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 HMGN2P46Q86SG4 172 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 PDZD3Q86UT5 571 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 SLC24A4Q8NFF2 622 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 OR4K1Q8NGD4 311 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 OR2T4Q8NH00 348 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 GPR148Q8TDV2 347 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 SOCS4Q8WXH5 440 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 INTS14Q96SY0 518 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 SLC30A3Q99726 388 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 PIGVQ9NUD9 493 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 ARFGEF1Q9Y6D6 1849 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 OR51F1A6NGY5 319 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 PHOX2AO14813 284 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 CFIP05156 583 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 GGT5P36269 586 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 CCR9P51686 369 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 OTUD1Q5VV17 481 aaPredicted RBP9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 CCDC116Q8IYX3 515 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 CPXM2Q8N436 756 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 NHLRC2Q8NBF2 726 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 CMTM2Q8TAZ6 248 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 ZCCHC14Q8WYQ9 949 aaKnown RBP9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 POFUT1Q9H488 388 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 SIDT1Q9NXL6 827 aaKnown RBP9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 MYOTQ9UBF9 498 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 LINC00862A6NCI5 91 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 A6NL46 340 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 PIPP12273 146 aaPredicted RBP9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 ZNF154Q13106 437 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 GGNBP1Q5YKI7 109 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 LEG1Q6P5S2 330 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 GRINAQ7Z429 371 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 PRR22Q8IZ63 422 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 FBXL6Q8N531 539 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 ARNTL2Q8WYA1 636 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 ANKRD19PQ9H560 264 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 DDX31Q9H8H2 851 aaKnown RBP9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 LOC102723971A0A1B0GUV8 181 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 TMEM218A2RU14 115 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 PGCP20142 388 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 SNRPGP62308 76 aaKnown RBP9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 AKR1C1Q04828 323 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 TCTEX1D1Q8N7M0 179 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 MIB2Q96AX9 1013 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 GPR52Q9Y2T5 361 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 NOSIPQ9Y314 301 aaKnown RBP9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 SURF4O15260 269 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 LIMK1P53667 647 aa9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 ADARB1P78563 741 aaKnown RBP9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 PAFAH1B3Q15102 231 aaKnown RBP9.69□□□□□ -0.86
SPTBN1-201ENST00000333896 TMEM135Q86UB9 458 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms