RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 LYPD3O95274 346 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 CRYBA1P05813 215 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 FABP1P07148 127 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 C8orf89P0DMQ9 161 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 SSR2P43308 183 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 AKR1C2P52895 323 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 AKR1C1Q04828 323 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 SWI5Q1ZZU3 235 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 PCGF3Q3KNV8 242 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 C10orf91Q5T1B1 145 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 ZNF836Q6ZNA1 936 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 ZNF547Q8IVP9 402 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 GLB1L2Q8IW92 636 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 NUP43Q8NFH3 380 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 PHYHIPQ92561 330 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 WNT2BQ93097 391 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 MOAP1Q96BY2 351 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 PRAP1Q96NZ9 151 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 CHST6Q9GZX3 395 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 TMEM185BQ9H7F4 350 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 PRDM9Q9NQV7 894 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 MYEF2Q9P2K5 600 aaKnown RBP11.75□□□□□ -0.53
CCDC60-201ENST00000327554 ZNF230Q9UIE0 474 aaPredicted RBP11.75□□□□□ -0.53
CCDC60-201ENST00000327554 TINAGQ9UJW2 476 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 LSM7Q9UK45 103 aaKnown RBP11.75□□□□□ -0.53
CCDC60-201ENST00000327554 LHX6Q9UPM6 363 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 H7C417 338 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 EMC8O43402 210 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 LCMT2O60294 686 aaKnown RBP11.75□□□□□ -0.53
CCDC60-201ENST00000327554 SLC25A12O75746 678 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 CALCBP10092 127 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 HTR2AP28223 471 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 BDKRB2P30411 391 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 FAUP35544 74 aaKnown RBP11.75□□□□□ -0.53
CCDC60-201ENST00000327554 PSMB10P40306 273 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 MC3RP41968 323 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 POU4F2Q12837 409 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 ILF3Q12906 894 aaKnown RBP eCLIP11.75□□□□□ -0.53
CCDC60-201ENST00000327554 FAM46CQ5VWP2 391 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 TPGS2Q68CL5 300 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 DEFB132Q7Z7B7 95 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 NLGN2Q8NFZ4 835 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 VN1R2Q8NFZ6 395 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 TMEM239Q8WW34 195 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 ZMYND19Q96E35 227 aaPredicted RBP11.75□□□□□ -0.53
CCDC60-201ENST00000327554 SLC35A4Q96G79 324 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 IL21RQ9HBE5 538 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 GSN-AS1Q9NRJ2 163 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 MTFP1Q9UDX5 166 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 ASF1AQ9Y294 204 aa11.75□□□□□ -0.53
CCDC60-201ENST00000327554 CENPVL1A0A0U1RR11 272 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 A0A1W2PR48 441 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 BCL2L11O43521 198 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 OR1F1O43749 312 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 ABLIM3O94929 683 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 AKR7A3O95154 331 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 SNAPINO95295 136 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 PPP1R3DO95685 299 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 PAK4O96013 591 aaPredicted RBP11.74□□□□□ -0.53
CCDC60-201ENST00000327554 CYBAP13498 195 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 ZNF3P17036 446 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 NDUFS1P28331 727 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 ACTA2P62736 377 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 ACTG2P63267 376 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 STX4Q12846 297 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 NDUFAF6Q330K2 333 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 C9orf64Q5T6V5 341 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 RPL13AP3Q6NVV1 102 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 DPPA4Q7L190 304 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 ZNF461Q8TAF7 563 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 RGP1Q92546 391 aaPredicted RBP11.74□□□□□ -0.53
CCDC60-201ENST00000327554 RAD51AP1Q96B01 352 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 VN1R3Q9BXE9 311 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 RSPH9Q9H1X1 276 aaPredicted RBP11.74□□□□□ -0.53
CCDC60-201ENST00000327554 APMAPQ9HDC9 416 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 GPN3Q9UHW5 284 aaPredicted RBP11.74□□□□□ -0.53
CCDC60-201ENST00000327554 GNG8Q9UK08 70 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 ICAM5Q9UMF0 924 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 ZNF337Q9Y3M9 751 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 OR10H1Q9Y4A9 318 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 TRAV27A0A087WT01 109 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 KANTRA0A1W2PQU2 76 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 MEX3AA1L020 520 aaKnown RBP11.74□□□□□ -0.53
CCDC60-201ENST00000327554 TRAPPC13A5PLN9 417 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 C4orf51C9J302 202 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 GRM6O15303 877 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 TMEM127O75204 238 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 CD8AP01732 235 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 ERGP11308 486 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 AGTR1P30556 359 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 HAAOP46952 286 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 PLA2G7Q13093 441 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 PAN3Q58A45 887 aaKnown RBP11.74□□□□□ -0.53
CCDC60-201ENST00000327554 AVPI1Q5T686 147 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 NUP210LQ5VU65 1888 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 RNF113BQ8IZP6 322 aaKnown RBP11.74□□□□□ -0.53
CCDC60-201ENST00000327554 ZFP82Q8N141 532 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 DUSP19Q8WTR2 217 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 PHYHIPLQ96FC7 376 aa11.74□□□□□ -0.53
CCDC60-201ENST00000327554 IL21Q9HBE4 155 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms