RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 GJD4Q96KN9 370 aaPredicted RBP6.59□□□□□ -1.35
SMC1A-201ENST00000322213 SLC7A7Q9UM01 511 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 USP22Q9UPT9 525 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 DIRAS3O95661 229 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 MT-ND4LP03901 98 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 HNF1AP20823 631 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 IDSP22304 550 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 NFYBP25208 207 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 FAM189BP81408 668 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 EIF2B1Q14232 305 aaKnown RBP6.59□□□□□ -1.35
SMC1A-201ENST00000322213 TPRG1Q6ZUI0 275 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 SLC43A2Q8N370 569 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 C9orf62Q8N4C0 152 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 SPICQ8N5J4 248 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 BPIFCQ8NFQ6 507 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 ASB17Q8WXJ9 295 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 PITX2Q99697 317 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 KCNK12Q9HB15 430 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 IL21RQ9HBE5 538 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 Q9N2J8 555 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 CTSFQ9UBX1 484 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 URGCP-MRPS24S4R325 110 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 MEIS3P1A6NDR6 274 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 POM121BA6NF01 834 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 GABRR3A8MPY1 467 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 PFKMP08237 780 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 ZNF74Q16587 644 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 FAM26DQ5JW98 314 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 CMTM1Q8IZ96 169 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 FAM185AQ8N0U4 392 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 OR4K14Q8NGD5 310 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 ATF6BQ99941 703 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 DMRT3Q9NQL9 472 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.59□□□□□ -1.35
SMC1A-201ENST00000322213 PIRO00625 290 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 OR2T1O43869 369 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 AHRP35869 848 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 CD81P60033 236 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 GPR157Q5UAW9 335 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 RGMBQ6NW40 437 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 FIGNL1Q6PIW4 674 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 RNF111Q6ZNA4 994 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 OR8D4Q8NGM9 314 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 SLC25A36Q96CQ1 311 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 LMLNQ96KR4 655 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 ENY2Q9NPA8 101 aa6.59□□□□□ -1.35
SMC1A-201ENST00000322213 KIAA1671Q9BY89 1806 aa6.59□□□□□ -1.36
SMC1A-201ENST00000322213 LOC100289279A0A1B0GTE1 492 aa6.59□□□□□ -1.36
SMC1A-201ENST00000322213 TBC1D3BA6NDS4 549 aa6.59□□□□□ -1.36
SMC1A-201ENST00000322213 A6NIZ1 184 aa6.59□□□□□ -1.36
SMC1A-201ENST00000322213 UPK3BL1B0FP48 263 aa6.59□□□□□ -1.36
SMC1A-201ENST00000322213 UPK3BL2E5RIL1 263 aa6.59□□□□□ -1.36
SMC1A-201ENST00000322213 PDHXO00330 501 aa6.59□□□□□ -1.36
SMC1A-201ENST00000322213 GPX5O75715 221 aa6.59□□□□□ -1.36
SMC1A-201ENST00000322213 CTSEP14091 401 aa6.59□□□□□ -1.36
SMC1A-201ENST00000322213 GALP22466 123 aa6.59□□□□□ -1.36
SMC1A-201ENST00000322213 SLC26A5P58743 744 aa6.59□□□□□ -1.36
SMC1A-201ENST00000322213 RAP1BP61224 184 aa6.59□□□□□ -1.36
SMC1A-201ENST00000322213 NFATC4Q14934 902 aa6.59□□□□□ -1.36
SMC1A-201ENST00000322213 AMZ1Q400G9 498 aa6.59□□□□□ -1.36
SMC1A-201ENST00000322213 FAM111BQ6SJ93 734 aa6.59□□□□□ -1.36
SMC1A-201ENST00000322213 GPR135Q8IZ08 494 aa6.59□□□□□ -1.36
SMC1A-201ENST00000322213 HORMAD2Q8N7B1 307 aa6.59□□□□□ -1.36
SMC1A-201ENST00000322213 UBAC2Q8NBM4 344 aa6.59□□□□□ -1.36
SMC1A-201ENST00000322213 NEURL3Q96EH8 262 aa6.59□□□□□ -1.36
SMC1A-201ENST00000322213 ZIC5Q96T25 663 aa6.59□□□□□ -1.36
SMC1A-201ENST00000322213 A4GALTQ9NPC4 353 aa6.59□□□□□ -1.36
SMC1A-201ENST00000322213 SLC6A14Q9UN76 642 aa6.59□□□□□ -1.36
SMC1A-201ENST00000322213 CPED1A4D0V7 1026 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 HMSDA8MTL9 139 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 PPP1R3DO95685 299 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 SERPINA2P20848 420 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 HTD2P86397 168 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 DOC2AQ14183 400 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 TAF9Q16594 264 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 TMEM41BQ5BJD5 291 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 LRRTM4Q86VH4 590 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 HAPLN2Q9GZV7 340 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 ANKRD19PQ9H560 264 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 EVA1AQ9H8M9 152 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 DKKL1Q9UK85 242 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 SLC38A8A6NNN8 435 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 LILRB5O75023 590 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 CR2P20023 1033 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 ADRA1AP35348 466 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 TGFBR1P36897 503 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 BDH1Q02338 343 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 GLO1Q04760 184 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 LEXMQ3ZCV2 418 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 TMEM71Q6P5X7 295 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 ZNF689Q96CS4 500 aaPredicted RBP6.58□□□□□ -1.36
SMC1A-201ENST00000322213 SMOQ99835 787 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 MTHFD2LQ9H903 347 aaPredicted RBP6.58□□□□□ -1.36
SMC1A-201ENST00000322213 TESQ9UGI8 421 aaKnown RBP6.58□□□□□ -1.36
SMC1A-201ENST00000322213 FBXO10Q9UK96 956 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 GPR37L1O60883 481 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 EIF4EP06730 217 aaKnown RBP6.58□□□□□ -1.36
SMC1A-201ENST00000322213 SNRPBP14678 240 aaKnown RBP6.58□□□□□ -1.36
SMC1A-201ENST00000322213 CD52P31358 61 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 MAT1AQ00266 395 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms