RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 PCGF3Q3KNV8 242 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 RNF212Q495C1 297 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 DHRS7BQ6IAN0 325 aaPredicted RBP4.41□□□□□ -1.7
PTPN13-201ENST00000316707 IL34Q6ZMJ4 242 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 LRRTM4Q86VH4 590 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 SLC35F2Q8IXU6 374 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 OR6S1Q8NH40 331 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 RNF141Q8WVD5 230 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 HSPA12BQ96MM6 686 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 IL20RAQ9UHF4 553 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 MOKQ9UQ07 419 aa4.41□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF443Q9Y2A4 671 aaPredicted RBP4.41□□□□□ -1.7
PTPN13-201ENST00000316707 OR2AT4A6NND4 320 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 POM121CA8CG34 1229 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 CBX7O95931 251 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 RLN2P04090 185 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 CD2P06729 351 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 DPP4P27487 766 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 NDUFS1P28331 727 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 CSNK1G2P78368 415 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF234Q14588 700 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 SERPINA12Q8IW75 414 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 CCDC116Q8IYX3 515 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 MMP21Q8N119 569 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 LRRC25Q8N386 305 aaPredicted RBP4.4□□□□□ -1.7
PTPN13-201ENST00000316707 OR5M1Q8NGP8 315 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 OR5K2Q8NHB8 316 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 NUS1Q96E22 293 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 C16orf58Q96GQ5 468 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 PTPN18Q99952 460 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 TMEM185BQ9H7F4 350 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 NOX4Q9NPH5 578 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 KLK11Q9UBX7 282 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 YBX2Q9Y2T7 364 aaKnown RBP4.4□□□□□ -1.7
PTPN13-201ENST00000316707 URADA6NGE7 173 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 FCMRO60667 390 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 SLC2A10O95528 541 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 GUSBP08236 651 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF806P0C7X5 589 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 CTSAP10619 480 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 GJA1P17302 382 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 POU3F2P20265 443 aaPredicted RBP4.4□□□□□ -1.7
PTPN13-201ENST00000316707 DCTDP32321 178 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 ARHGAP11BQ3KRB8 267 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 HES5Q5TA89 166 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 WDR88Q6ZMY6 472 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 ABHD13Q7L211 337 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 OR8K3Q8NH51 312 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 SLC22A12Q96S37 553 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF350Q9GZX5 532 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 COMMD4Q9H0A8 199 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 PCDHGA5Q9Y5G8 931 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 POMT1Q9Y6A1 747 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 MCM3APO60318 1980 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF236Q9UL36 1845 aa4.4□□□□□ -1.7
PTPN13-201ENST00000316707 GOSR2O14653 212 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 SRPX2O60687 465 aaPredicted RBP4.4□□□□□ -1.71
PTPN13-201ENST00000316707 CTSOP43234 321 aaPredicted RBP4.4□□□□□ -1.71
PTPN13-201ENST00000316707 CENPAP49450 140 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 GATMP50440 423 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 ZNF136P52737 540 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 CAP1Q01518 475 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 ZIC1Q15915 447 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 C6orf132Q5T0Z8 1188 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 SFRP5Q5T4F7 317 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 RAB12Q6IQ22 244 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 ESPNLQ6ZVH7 1005 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 OR51A7Q8NH64 312 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 FOXJ1Q92949 421 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 LMLNQ96KR4 655 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 TRPV4Q9HBA0 871 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 MEPEQ9NQ76 525 aaPredicted RBP4.4□□□□□ -1.71
PTPN13-201ENST00000316707 CLEC4EQ9ULY5 219 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 TNFSF18Q9UNG2 199 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 FAM74A7A6NL05 159 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 C1orf196B1AJZ1 125 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 PYCARD-AS1I3L0S3 204 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 LEFTY2O00292 366 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 TPT1P13693 172 aaKnown RBP4.4□□□□□ -1.71
PTPN13-201ENST00000316707 ANXA7P20073 488 aaKnown RBP4.4□□□□□ -1.71
PTPN13-201ENST00000316707 TBXA2RP21731 343 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 SLC2A5P22732 501 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 TRHRP34981 398 aaPredicted RBP4.4□□□□□ -1.71
PTPN13-201ENST00000316707 MAP3K8P41279 467 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 PRKXP51817 358 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 GUCA2BQ16661 112 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 FAM74A3Q4VXF1 159 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 PRSS45Q7RTY3 260 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 COMTD1Q86VU5 262 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 CLEC1AQ8NC01 280 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 OR5J2Q8NH18 312 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 DUSP19Q8WTR2 217 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 DERL3Q96Q80 235 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 PRRT1Q99946 306 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 WBP1LQ9NX94 342 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 OR5V1Q9UGF6 321 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 GNG8Q9UK08 70 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 C19orf53Q9UNZ5 99 aaPredicted RBP4.4□□□□□ -1.71
PTPN13-201ENST00000316707 SH2B3Q9UQQ2 575 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 PLEKHA6Q9Y2H5 1048 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms