RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 ZNF28P17035 718 aa16.7■□□□□ 0.26
CCDC43-201ENST00000315286 CXCR1P25024 350 aa16.7■□□□□ 0.26
CCDC43-201ENST00000315286 RPS5P46782 204 aaKnown RBP16.7■□□□□ 0.26
CCDC43-201ENST00000315286 P2RX1P51575 399 aa16.7■□□□□ 0.26
CCDC43-201ENST00000315286 HCCSP53701 268 aa16.7■□□□□ 0.26
CCDC43-201ENST00000315286 FBXW4P57775 412 aa16.7■□□□□ 0.26
CCDC43-201ENST00000315286 CBFBQ13951 182 aa16.7■□□□□ 0.26
CCDC43-201ENST00000315286 IL11RAQ14626 422 aa16.7■□□□□ 0.26
CCDC43-201ENST00000315286 INSL4Q14641 139 aa16.7■□□□□ 0.26
CCDC43-201ENST00000315286 CLPPQ16740 277 aaPredicted RBP16.7■□□□□ 0.26
CCDC43-201ENST00000315286 ISXQ2M1V0 245 aa16.7■□□□□ 0.26
CCDC43-201ENST00000315286 TBC1D25Q3MII6 688 aa16.7■□□□□ 0.26
CCDC43-201ENST00000315286 CPEB2Q7Z5Q1 589 aaKnown RBP16.7■□□□□ 0.26
CCDC43-201ENST00000315286 PARP16Q8N5Y8 322 aa16.7■□□□□ 0.26
CCDC43-201ENST00000315286 NUBPLQ8TB37 319 aa16.7■□□□□ 0.26
CCDC43-201ENST00000315286 SLC25A46Q96AG3 418 aa16.7■□□□□ 0.26
CCDC43-201ENST00000315286 Q96M85 177 aa16.7■□□□□ 0.26
CCDC43-201ENST00000315286 LPAR4Q99677 370 aa16.7■□□□□ 0.26
CCDC43-201ENST00000315286 SLC26A1Q9H2B4 701 aa16.7■□□□□ 0.26
CCDC43-201ENST00000315286 ASB6Q9NWX5 421 aa16.7■□□□□ 0.26
CCDC43-201ENST00000315286 GALNT8Q9NY28 637 aa16.7■□□□□ 0.26
CCDC43-201ENST00000315286 CRNNQ9UBG3 495 aaPredicted RBP16.7■□□□□ 0.26
CCDC43-201ENST00000315286 GSTK1Q9Y2Q3 226 aa16.7■□□□□ 0.26
CCDC43-201ENST00000315286 A0A1W2PQL4 384 aaPredicted RBP16.69■□□□□ 0.26
CCDC43-201ENST00000315286 C4orf47A7E2U8 309 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 IDH3BO43837 385 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 GP1BBP13224 206 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 PSPHP78330 225 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 BDH1Q02338 343 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 ZNF45Q02386 682 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 ALG10Q5BKT4 473 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 FAM69BQ5VUD6 431 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 C1QL3Q5VWW1 255 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 MRPL14Q6P1L8 145 aaKnown RBP16.69■□□□□ 0.26
CCDC43-201ENST00000315286 BPHLQ86WA6 291 aaPredicted RBP16.69■□□□□ 0.26
CCDC43-201ENST00000315286 BMPERQ8N8U9 685 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 ABTB1Q969K4 478 aaPredicted RBP16.69■□□□□ 0.26
CCDC43-201ENST00000315286 DNAJA3Q96EY1 480 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 COX4I2Q96KJ9 171 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 SMURF1Q9HCE7 757 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 ALPK2Q86TB3 2170 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 KIF26BQ2KJY2 2108 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 TEX13CA0A0J9YWL9 993 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 TMEM221A6NGB7 291 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 E9PI62 339 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 M0R296 226 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 CDC40O60508 579 aaKnown RBP eCLIP16.69■□□□□ 0.26
CCDC43-201ENST00000315286 SERPINI2O75830 405 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 TFP02787 698 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 HLA-DPB1P04440 258 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 F13BP05160 661 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 CD14P08571 375 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 UQCRC1P31930 480 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 CTXN1P60606 82 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 ZFP36L1Q07352 338 aaKnown RBP16.69■□□□□ 0.26
CCDC43-201ENST00000315286 POU4F2Q12837 409 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 QPRTQ15274 297 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 TMEM205Q6UW68 189 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 SSX6Q7RTT6 188 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 FAM122BQ7Z309 247 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 GPR119Q8TDV5 335 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 NMNAT2Q9BZQ4 307 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 ZMIZ1Q9ULJ6 1067 aa16.69■□□□□ 0.26
CCDC43-201ENST00000315286 GABRPO00591 440 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 CPNE3O75131 537 aaKnown RBP16.68■□□□□ 0.26
CCDC43-201ENST00000315286 MT-ND5P03915 603 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 OCM2P0CE71 109 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 OCMP0CE72 109 aaPredicted RBP16.68■□□□□ 0.26
CCDC43-201ENST00000315286 CCL4P13236 92 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 CDKN2AP42771 156 aaKnown RBP16.68■□□□□ 0.26
CCDC43-201ENST00000315286 RPL18Q07020 188 aaKnown RBP16.68■□□□□ 0.26
CCDC43-201ENST00000315286 HNRNPA0Q13151 305 aaKnown RBP16.68■□□□□ 0.26
CCDC43-201ENST00000315286 EFR3AQ14156 821 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 PON3Q15166 354 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 OR5M10Q6IEU7 315 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 FAM199XQ6PEV8 388 aaPredicted RBP16.68■□□□□ 0.26
CCDC43-201ENST00000315286 NUP54Q7Z3B4 507 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 CCDC190Q86UF4 302 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 RFLNBQ8N5W9 214 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 AGBL5Q8NDL9 886 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 B4GALNT2Q8NHY0 566 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 C4orf36Q96KX1 117 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 MED18Q9BUE0 208 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 FAIMQ9NVQ4 179 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 DAPK2Q9UIK4 370 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 SMIM30A4D0T7 59 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 C2orf72A6NCS6 295 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 J3QLW9 94 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 RNF13O43567 381 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 ZNF19P17023 458 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 SPI1P17947 270 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 TNFSF8P32971 234 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 ETV6P41212 452 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 DIO1P49895 249 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 OR12D2P58182 307 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 SLC26A5P58743 744 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 ACTC1P68032 377 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 ACTA1P68133 377 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 RUNX1T1Q06455 604 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 GPR50Q13585 617 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms