RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 OR5M1Q8NGP8 315 aa12.5□□□□□ -0.41
NPAS4-201ENST00000311034 SYNPRQ8TBG9 265 aa12.5□□□□□ -0.41
NPAS4-201ENST00000311034 THAP3Q8WTV1 239 aaPredicted RBP12.5□□□□□ -0.41
NPAS4-201ENST00000311034 KISS1RQ969F8 398 aaPredicted RBP12.5□□□□□ -0.41
NPAS4-201ENST00000311034 PGLYRP3Q96LB9 341 aa12.5□□□□□ -0.41
NPAS4-201ENST00000311034 FAM83CQ9BQN1 747 aa12.5□□□□□ -0.41
NPAS4-201ENST00000311034 PRDM7Q9NQW5 492 aa12.5□□□□□ -0.41
NPAS4-201ENST00000311034 PTTG3PQ9NZH4 202 aa12.5□□□□□ -0.41
NPAS4-201ENST00000311034 FBXL3Q9UKT7 428 aa12.5□□□□□ -0.41
NPAS4-201ENST00000311034 PDCD5O14737 125 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 SELENOFO60613 162 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 TBX19O60806 448 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 RP2O75695 350 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 NFATC1O95644 943 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 RPE65Q16518 533 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 PRRT3Q5FWE3 981 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 YOD1Q5VVQ6 348 aaPredicted RBP12.49□□□□□ -0.41
NPAS4-201ENST00000311034 SHISA6Q6ZSJ9 500 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 OR2L5Q8NG80 312 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 SFXN5Q8TD22 340 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 SMIM4Q8WVI0 70 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 FGF13Q92913 245 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 HGDQ93099 445 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 AHCYL2Q96HN2 611 aaKnown RBP12.49□□□□□ -0.41
NPAS4-201ENST00000311034 LRIG1Q96JA1 1093 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 ULBP3Q9BZM4 244 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 B3GNT4Q9C0J1 378 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 LIN7BQ9HAP6 207 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 MCCC2Q9HCC0 563 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 KLHL9Q9P2J3 617 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 FBXO9Q9UK97 447 aaPredicted RBP12.49□□□□□ -0.41
NPAS4-201ENST00000311034 A0A1B0GTH9 108 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 BHLHE40O14503 412 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 GOSR2O14653 212 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 KAT7O95251 611 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 ATP1B1P05026 303 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 ICAM2P13598 275 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 RAB28P51157 221 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 LGALS3BPQ08380 585 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 HNRNPA1L2Q32P51 320 aaKnown RBP12.49□□□□□ -0.41
NPAS4-201ENST00000311034 FAM78AQ5JUQ0 283 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 MFSD12Q6NUT3 480 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 STPG2Q8N412 459 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 OR4N2Q8NGD1 307 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 CNOT9Q92600 299 aaKnown RBP12.49□□□□□ -0.41
NPAS4-201ENST00000311034 SGTBQ96EQ0 304 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 PELI1Q96FA3 418 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 HSPA12BQ96MM6 686 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 ELF4Q99607 663 aaPredicted RBP12.49□□□□□ -0.41
NPAS4-201ENST00000311034 AIFM2Q9BRQ8 373 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 TSPAN10Q9H1Z9 355 aaPredicted RBP12.49□□□□□ -0.41
NPAS4-201ENST00000311034 SAV1Q9H4B6 383 aaPredicted RBP12.49□□□□□ -0.41
NPAS4-201ENST00000311034 CMC2Q9NRP2 79 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 ADAM29Q9UKF5 820 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 DUXAA6NLW8 204 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 PPM1BO75688 479 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 SERPINA3P01011 423 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 ZNF35P13682 527 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 CTRB1P17538 263 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 VEGFBP49765 207 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 BDH1Q02338 343 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 MLF2Q15773 248 aaPredicted RBP12.49□□□□□ -0.41
NPAS4-201ENST00000311034 CTRB2Q6GPI1 263 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 HDDC2Q7Z4H3 204 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 TMED4Q7Z7H5 227 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 NRROSQ86YC3 692 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 LRRC25Q8N386 305 aaPredicted RBP12.49□□□□□ -0.41
NPAS4-201ENST00000311034 MRPL43Q8N983 215 aaKnown RBP12.49□□□□□ -0.41
NPAS4-201ENST00000311034 GPN1Q9HCN4 374 aaPredicted RBP12.49□□□□□ -0.41
NPAS4-201ENST00000311034 SLC6A20Q9NP91 592 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 ABRACLQ9P1F3 81 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 SLC35A3Q9Y2D2 325 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 SLC6A5Q9Y345 797 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 IER3IP1Q9Y5U9 82 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 NPFFR2Q9Y5X5 522 aa12.49□□□□□ -0.41
NPAS4-201ENST00000311034 UBE2QL1A1L167 161 aa12.48□□□□□ -0.41
NPAS4-201ENST00000311034 ANXA2P2A6NMY6 339 aa12.48□□□□□ -0.41
NPAS4-201ENST00000311034 C4orf47A7E2U8 309 aa12.48□□□□□ -0.41
NPAS4-201ENST00000311034 EML2O95834 649 aa12.48□□□□□ -0.41
NPAS4-201ENST00000311034 IFNGP01579 166 aa12.48□□□□□ -0.41
NPAS4-201ENST00000311034 F13BP05160 661 aa12.48□□□□□ -0.41
NPAS4-201ENST00000311034 SLC35G6P0C7Q6 338 aa12.48□□□□□ -0.41
NPAS4-201ENST00000311034 DDX6P26196 483 aaKnown RBP eCLIP12.48□□□□□ -0.41
NPAS4-201ENST00000311034 TLX1P31314 330 aaPredicted RBP12.48□□□□□ -0.41
NPAS4-201ENST00000311034 EIF1AXP47813 144 aaKnown RBP12.48□□□□□ -0.41
NPAS4-201ENST00000311034 MLC1Q15049 377 aa12.48□□□□□ -0.41
NPAS4-201ENST00000311034 BEX5Q5H9J7 111 aa12.48□□□□□ -0.41
NPAS4-201ENST00000311034 METRNLQ641Q3 311 aa12.48□□□□□ -0.41
NPAS4-201ENST00000311034 FAM109BQ6ICB4 259 aaPredicted RBP12.48□□□□□ -0.41
NPAS4-201ENST00000311034 GPAT4Q86UL3 456 aa12.48□□□□□ -0.41
NPAS4-201ENST00000311034 ZNF511Q8NB15 262 aa12.48□□□□□ -0.41
NPAS4-201ENST00000311034 SPACA7Q96KW9 195 aa12.48□□□□□ -0.41
NPAS4-201ENST00000311034 TMEM27Q9HBJ8 222 aa12.48□□□□□ -0.41
NPAS4-201ENST00000311034 NTMQ9P121 344 aa12.48□□□□□ -0.41
NPAS4-201ENST00000311034 RABL2AQ9UBK7 228 aaPredicted RBP12.48□□□□□ -0.41
NPAS4-201ENST00000311034 TSPAN11A1L157 253 aa12.48□□□□□ -0.41
NPAS4-201ENST00000311034 FOXL2P58012 376 aa12.48□□□□□ -0.41
NPAS4-201ENST00000311034 SIRPAP78324 504 aa12.48□□□□□ -0.41
NPAS4-201ENST00000311034 GRM7Q14831 915 aa12.48□□□□□ -0.41
NPAS4-201ENST00000311034 IRF4Q15306 451 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms