RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 PRPF38BQ5VTL8 546 aaKnown RBP9.51□□□□□ -0.89
APOBEC3F-201ENST00000308521 RGS7BPQ6MZT1 257 aaPredicted RBP9.51□□□□□ -0.89
APOBEC3F-201ENST00000308521 JAZF1Q86VZ6 243 aa9.51□□□□□ -0.89
APOBEC3F-201ENST00000308521 GID4Q8IVV7 300 aa9.51□□□□□ -0.89
APOBEC3F-201ENST00000308521 CMIPQ8IY22 773 aa9.51□□□□□ -0.89
APOBEC3F-201ENST00000308521 ARL14Q8N4G2 192 aa9.51□□□□□ -0.89
APOBEC3F-201ENST00000308521 MFSD9Q8NBP5 474 aa9.51□□□□□ -0.89
APOBEC3F-201ENST00000308521 DOK4Q8TEW6 326 aa9.51□□□□□ -0.89
APOBEC3F-201ENST00000308521 SLC22A18Q96BI1 424 aa9.51□□□□□ -0.89
APOBEC3F-201ENST00000308521 FAM46AQ96IP4 442 aaKnown RBP9.51□□□□□ -0.89
APOBEC3F-201ENST00000308521 DDX31Q9H8H2 851 aaKnown RBP9.51□□□□□ -0.89
APOBEC3F-201ENST00000308521 FAM60AQ9NP50 221 aa9.51□□□□□ -0.89
APOBEC3F-201ENST00000308521 EQTNQ9NQ60 294 aa9.51□□□□□ -0.89
APOBEC3F-201ENST00000308521 FSCN3Q9NQT6 498 aa9.51□□□□□ -0.89
APOBEC3F-201ENST00000308521 POLE3Q9NRF9 147 aa9.51□□□□□ -0.89
APOBEC3F-201ENST00000308521 SEMA4GQ9NTN9 838 aa9.51□□□□□ -0.89
APOBEC3F-201ENST00000308521 POT1Q9NUX5 634 aa9.51□□□□□ -0.89
APOBEC3F-201ENST00000308521 NUDT15Q9NV35 164 aa9.51□□□□□ -0.89
APOBEC3F-201ENST00000308521 RP1P56715 2156 aa9.51□□□□□ -0.89
APOBEC3F-201ENST00000308521 CEP192Q8TEP8 1941 aa9.51□□□□□ -0.89
APOBEC3F-201ENST00000308521 EML5Q05BV3 1969 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 TRAV20A0A0B4J274 112 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 KIR2DS5A0A0G2JLQ3 304 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 A0A0G2JNG1 304 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 KIR2DS3K7RE56 304 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 SELENOFO60613 162 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 SULT1A3P0DMM9 295 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 SULT1A4P0DMN0 295 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 NME1P15531 152 aaKnown RBP9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 ATP5A1P25705 553 aaKnown RBP9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 CALCRP30988 508 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 AHRP35869 848 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 FNTBP49356 437 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 CAMK2DQ13557 499 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 SLC9A5Q14940 896 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 KIR2DS5Q14953 304 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 CLEC12AQ5QGZ9 265 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 PDSS1Q5T2R2 415 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 NKAIN2Q5VXU1 208 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 CDC73Q6P1J9 531 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 RAB11FIP2Q7L804 512 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 MEX3DQ86XN8 651 aaKnown RBP9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 SAMD12Q8N8I0 201 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 CADM4Q8NFZ8 388 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 OR2L5Q8NG80 312 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 C1orf216Q8TAB5 229 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 ACOT11Q8WXI4 607 aaPredicted RBP9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 HSD17B8Q92506 261 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 MOAP1Q96BY2 351 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 OR2A5Q96R48 311 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 CTPS2Q9NRF8 586 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 CNIH4Q9P003 139 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 TECTAO75443 2155 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 CACNA1EQ15878 2313 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 A0A1B0GVT2 93 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 A0A1B0GW55 424 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 C2orf74A8MZ97 194 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 H0YGG7 62 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 MPC2O95563 127 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 DUX4L2P0CJ85 424 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 DUX4L3P0CJ86 424 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 DUX4L4P0CJ87 422 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 DUX4L5P0CJ88 424 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 DUX4L6P0CJ89 424 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 DUX4L7P0CJ90 424 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 ST6GAL1P15907 406 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 ATP6V1E1P36543 226 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 GDI2P50395 445 aaKnown RBP9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 ARF3P61204 181 aaPredicted RBP9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 DUSP2Q05923 314 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 ZNF124Q15973 351 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 LGALSLQ3ZCW2 172 aaPredicted RBP9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 SLC30A6Q6NXT4 461 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 SFXN4Q6P4A7 337 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 ZNF620Q6ZNG0 422 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 OLIG3Q7RTU3 272 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 FGD2Q7Z6J4 655 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 OR4N5Q8IXE1 308 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 CCDC116Q8IYX3 515 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 ACBD7Q8N6N7 88 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 OR1M1Q8NGA1 313 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 SPACA7Q96KW9 195 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 FN3KQ9H479 309 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 KCMF1Q9P0J7 381 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 DUX4Q9UBX2 424 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 SCP2D1Q9UJQ7 156 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 RASD1Q9Y272 281 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 NPTNQ9Y639 398 aa9.5□□□□□ -0.89
APOBEC3F-201ENST00000308521 A0A0G2JK05 382 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 M0R233 179 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 CH25HO95992 272 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 ADRB1P08588 477 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 S100PP25815 95 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 SHC1P29353 583 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 NTSP30990 170 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 PRKAG1P54619 331 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 PITPNAQ00169 270 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 ELOCQ15369 112 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 ZNF311Q5JNZ3 666 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 B3GLCTQ6Y288 498 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms