RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 AKR7A3O95154 331 aa9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 THRBP10828 461 aa9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 CD8BP10966 210 aa9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 POU2F1P14859 743 aa9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 MSX2P35548 267 aaPredicted RBP9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 RASSF2P50749 326 aa9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 EGR4Q05215 589 aa9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 TFF3Q07654 80 aa9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 ST3GAL3Q11203 375 aa9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 PDK3Q15120 406 aa9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 GUSBP1Q15486 140 aa9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 FBXL19-AS1Q494R0 122 aa9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 MTX3Q5HYI7 312 aa9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 SP5Q6BEB4 398 aaPredicted RBP9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 TMEM225Q6GV28 225 aa9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 MEX3BQ6ZN04 569 aaKnown RBP9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 GDF7Q7Z4P5 450 aa9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 BTLAQ7Z6A9 289 aa9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 GPAT4Q86UL3 456 aa9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 KIF18BQ86Y91 864 aa9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 MCUR1Q96AQ8 359 aa9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 KTI12Q96EK9 354 aaPredicted RBP9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 ZNF300Q96RE9 604 aaPredicted RBP9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 THTPAQ9BU02 230 aa9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 KLHL4Q9C0H6 718 aa9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 OPN3Q9H1Y3 402 aaPredicted RBP9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 BCO1Q9HAY6 547 aa9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 DCAF13Q9NV06 445 aaKnown RBP9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 TAS2R1Q9NYW7 299 aa9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 NOSIPQ9Y314 301 aaKnown RBP9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 FAM32AQ9Y421 112 aaKnown RBP9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 CORINQ9Y5Q5 1042 aa9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 DOPEY1Q5JWR5 2465 aa9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 FREM1Q5H8C1 2179 aa9.8□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 TENM4Q6N022 2769 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 IGKV1D-42A0A075B6H8 117 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 AQP7P3A6NL99 342 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 A8MXE2 369 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 C19orf84I3L1E1 186 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 KPNA4O00629 521 aaPredicted RBP9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 PDE5AO76074 875 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 VAMP5O95183 116 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 MT-ATP6P00846 226 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 NQO1P15559 274 aaKnown RBP9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 ITGA2P17301 1181 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 KLK2P20151 261 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 CBLP22681 906 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 COL8A1P27658 744 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 RBM34P42696 430 aaKnown RBP9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 FOXD4Q12950 439 aaPredicted RBP9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 PIN1Q13526 163 aaPredicted RBP9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 FXNQ16595 210 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 EXOC3L2Q2M3D2 409 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 BEND4Q6ZU67 534 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 GALNT5Q7Z7M9 940 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 DHFR2Q86XF0 187 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 P3H2Q8IVL5 708 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 CCDC103Q8IW40 242 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 ZNF100Q8IYN0 542 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 OFCC1Q8IZS5 231 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 TMEM99Q8N816 258 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 OR6S1Q8NH40 331 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 CCDC124Q96CT7 223 aaKnown RBP9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 LRGUKQ96M69 825 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 HS6ST2Q96MM7 605 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 PTDSS2Q9BVG9 487 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 FNDC11Q9BVV2 318 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 SF3B5Q9BWJ5 86 aaKnown RBP9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 SLC19A3Q9BZV2 496 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 TRIM15Q9C019 465 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 AMBRA1Q9C0C7 1298 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 NPDC1Q9NQX5 325 aaPredicted RBP9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 GALNT8Q9NY28 637 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 JKAMPQ9P055 326 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 ACTR3BQ9P1U1 418 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 RIMS3Q9UJD0 308 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 RASD1Q9Y272 281 aa9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 USP9XQ93008 2570 aaPredicted RBP9.79□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 IGKV3D-15A0A087WSY6 115 aa9.78□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 M0R082 166 aa9.78□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 HNRNPRO43390 633 aaKnown RBP9.78□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 AKAP8O43823 692 aaKnown RBP9.78□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 MRPL33O75394 65 aaKnown RBP9.78□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 HIST1H2ABP04908 130 aa9.78□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 UMPSP11172 480 aa9.78□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 GRPRP30550 384 aa9.78□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 YAP1P46937 504 aaKnown RBP9.78□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 SLC16A1P53985 500 aa9.78□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 H3F3AP84243 136 aa9.78□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 SORDQ00796 357 aa9.78□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 TRIM25Q14258 630 aaKnown RBP9.78□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 TRAM2Q15035 370 aa9.78□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 CASP12Q6UXS9 341 aa9.78□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 TFAP2EQ6VUC0 442 aa9.78□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 CYP2R1Q6VVX0 501 aa9.78□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 WDR88Q6ZMY6 472 aa9.78□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 HIST3H2AQ7L7L0 130 aa9.78□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 NUFIP2Q7Z417 695 aaKnown RBP9.78□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 LSRQ86X29 649 aaPredicted RBP9.78□□□□□ -0.84
CSPG4P2Y-201ENST00000306853 ZNF610Q8N9Z0 462 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms