RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 ARSGQ96EG1 525 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 HSFX1Q9UBD0 423 aa12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.62□□□□□ -0.39
CHRFAM7A-201ENST00000299847 KIR2DS5A0A0G2JLQ3 304 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 A0A0G2JNG1 304 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TCRBV3S1A0A5B6 114 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 KIR2DS3K7RE56 304 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 EIF3FO00303 357 aaPredicted RBP12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 BCAT2O15382 392 aaPredicted RBP12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CACNG3O60359 315 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ZFAND5O76080 213 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SHC1P29353 583 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ATP1B3P54709 279 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 KIR2DS5Q14953 304 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SLC36A2Q495M3 483 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 FBXO46Q6PJ61 603 aaPredicted RBP12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 MRPL43Q8N983 215 aaKnown RBP12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 H1FXQ92522 213 aaKnown RBP12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SAMD10Q9BYL1 202 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 HCFC2Q9Y5Z7 792 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ADRA1AP35348 466 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 OR13C9Q8NGT0 318 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ZNF419Q96HQ0 510 aaPredicted RBP12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 R3HDMLQ9H3Y0 253 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 OPA3Q9H6K4 179 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 NOSIPQ9Y314 301 aaKnown RBP12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 M0QYG6 137 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 OIP5O43482 229 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 MGST1P10620 155 aaKnown RBP12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 BIDP55957 195 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TNFRSF17Q02223 184 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ZNF546Q86UE3 836 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ZNF740Q8NDX6 193 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 LGALS14Q8TCE9 139 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SLC38A5Q8WUX1 472 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TCTEX1D2Q8WW35 142 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TWSG1Q9GZX9 223 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TXNL4BQ9NX01 149 aaKnown RBP12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ZNF281Q9Y2X9 895 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 EMC9Q9Y3B6 208 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 DNAJC25-GNG10A0A024R161 153 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 OR2T1O43869 369 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 PENKP01210 267 aaPredicted RBP12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 HTR3AP46098 478 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CCL11P51671 97 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 RELAQ04206 551 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ZNF534Q76KX8 674 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 MARCH3Q86UD3 253 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ZNF566Q969W8 418 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ZNF597Q96LX8 424 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SLC22A12Q96S37 553 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SELENOIQ9C0D9 397 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 UNKLQ9H9P5 680 aaKnown RBP12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 RABL2AQ9UBK7 228 aaPredicted RBP12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 RABL2BQ9UNT1 228 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ZC3H12DA2A288 527 aaKnown RBP12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 K7EPK0 472 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 GPR75O95800 540 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 FAM71E2Q8N5Q1 922 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TMEM217Q8N7C4 229 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 PFN4Q8NHR9 129 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 RNF128Q8TEB7 428 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 METTL9Q9H1A3 318 aa12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 PUS1Q9Y606 427 aaKnown RBP eCLIP12.61□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SLC43A1O75387 559 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 LPLP06858 475 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 NME2P22392 152 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ZNF91Q05481 1191 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CCSMST1Q4G0I0 132 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CHCHD4Q8N4Q1 142 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 KHSRPQ92945 711 aaKnown RBP eCLIP12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ISG20Q96AZ6 181 aaKnown RBP12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 RASD2Q96D21 266 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ELP4Q96EB1 424 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 WDR83Q9BRX9 315 aaKnown RBP12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CPNE5Q9HCH3 593 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 C19orf12Q9NSK7 152 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SIDT1Q9NXL6 827 aaKnown RBP12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 A0A1W2PS29 197 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ARHGAP33O14559 1287 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ZNF264O43296 627 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SELENOFO60613 162 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 INHBCP55103 352 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 BAXQ07812 192 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 MEF2DQ14814 521 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 OR8B8Q15620 311 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SLC6A19Q695T7 634 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 FJX1Q86VR8 437 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 DNAJC22Q8N4W6 341 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SLC7A13Q8TCU3 470 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 MSI2Q96DH6 328 aaKnown RBP12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 GAPDHSO14556 408 aaPredicted RBP12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 AQP9O43315 295 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 UTS2O95399 124 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 PRKACAP17612 351 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TAS2R19P59542 299 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 LDLRAD1Q5T700 205 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ZNF767PQ75MW2 155 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TMPRSS7Q7RTY8 843 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SLC35F3Q8IY50 421 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms