RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 WNT4P56705 351 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 C15orf52Q6ZUT6 534 aaKnown RBP10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 LANCL3Q6ZV70 420 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 SSUH2Q9Y2M2 353 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 M0R1X1 148 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 SNHG28P0DPA3 235 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 GGNBP1Q5YKI7 109 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 GRINAQ7Z429 371 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 GLIS1Q8NBF1 620 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 SLC25A18Q9H1K4 315 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 ZFP37Q9Y6Q3 630 aaPredicted RBP10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 FABP4P15090 132 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 SLC5A2P31639 672 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 DNAJC5GQ8N7S2 189 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 PHYHIPLQ96FC7 376 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 C20orf85Q9H1P6 137 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 AP5S1Q9NUS5 200 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 TCF21O43680 179 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 SPCS2Q15005 226 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 PLAG1Q6DJT9 500 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 OR13F1Q8NGS4 319 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 RAB8BQ92930 207 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 DNPH1O43598 174 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 ZNF25P17030 456 aaPredicted RBP10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 CD1CP29017 333 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 TEKQ02763 1124 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 GRB7Q14451 532 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 GATA6Q92908 595 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 MCHR1Q99705 422 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 RAB6CQ9H0N0 254 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 RFPL4AA6NLU0 287 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 VSTM2BA6NLU5 285 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 RFPL4AL1F8VTS6 287 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 ZNF264O43296 627 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 PLBD1Q6P4A8 553 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 TMEM217Q8N7C4 229 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 PRODH2Q9UF12 536 aa10.49□□□□□ -0.73
HDGFL3-201ENST00000299633 SMIM28A0A1B0GU29 152 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 GLSO94925 669 aaPredicted RBP10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 UNGP13051 313 aaPredicted RBP10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 SLC14A2Q15849 920 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 SCGB1D4Q6XE38 83 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 SHFQ7M4L6 423 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 NDFIP1Q9BT67 221 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 GJA4P35212 333 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 GLUD2P49448 558 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 OR4F3Q6IEY1 312 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 DRGXA6NNA5 263 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 CCL16O15467 120 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 L1CAMP32004 1257 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 UBE3DQ7Z6J8 389 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 BPIFB2Q8N4F0 458 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 SCARB1Q8WTV0 552 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 RPL10LQ96L21 214 aaKnown RBP10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 DNAJB11Q9UBS4 358 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 CREBBPQ92793 2442 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 TRBV23OR9-2A0A075B6M9 112 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 LOC105369274A0A096LPK9 316 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 HLA-DQB2P05538 268 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 TBPP20226 339 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 OR4N4Q8N0Y3 316 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 OR13D1Q8NGV5 346 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 PSMG2Q969U7 264 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 SLC25A32Q9H2D1 315 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 ADORA3P0DMS8 318 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 TMEM175Q9BSA9 504 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 OAS1P00973 400 aaKnown RBP10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 TTRP02766 147 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 MAT1AQ00266 395 aaKnown RBP10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 ZNF417Q8TAU3 575 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 IL1F10Q8WWZ1 152 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 PCDHB10Q9UN67 800 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 SMIM35A0A1B0GVV1 85 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 POP4O95707 220 aaKnown RBP10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 IL1R2P27930 398 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 ZCCHC14Q8WYQ9 949 aaKnown RBP10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 APOBEC3GQ9HC16 384 aaKnown RBP10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 GPR160Q9UJ42 338 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 H2AFB1P0C5Y9 115 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 NDUFAF7Q7L592 441 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 SLC45A3Q96JT2 553 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 SLC2A13Q96QE2 648 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 LMAN1LQ9HAT1 526 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 DTLQ9NZJ0 730 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 FCF1Q9Y324 198 aaKnown RBP10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 DNAJB1P25685 340 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 TANKQ92844 425 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 TRIB1Q96RU8 372 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 ARHGAP39Q9C0H5 1083 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 MAFBQ9Y5Q3 323 aaPredicted RBP10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 PEX12O00623 359 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 VNN1O95497 513 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 C8AP07357 584 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 RNH1P13489 461 aaKnown RBP10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 NLE1Q9NVX2 485 aaPredicted RBP10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 ZNF281Q9Y2X9 895 aa10.48□□□□□ -0.73
HDGFL3-201ENST00000299633 AQP9O43315 295 aa10.47□□□□□ -0.73
HDGFL3-201ENST00000299633 JRKO75564 520 aa10.47□□□□□ -0.73
HDGFL3-201ENST00000299633 CSTAP01040 98 aa10.47□□□□□ -0.73
HDGFL3-201ENST00000299633 TACR2P21452 398 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms