RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 IGKV5-2P06315 115 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 OR10J4P0C629 311 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 CT45A6P0DMU7 189 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 CT45A5P0DMU8 189 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 CT45A7P0DMV0 189 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 HIST1H1BP16401 226 aaKnown RBP4.54□□□□□ -1.68
CSMD3-201ENST00000297405 CHRNB4P30926 498 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 INHBCP55103 352 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 PLGLB1Q02325 96 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 HLXQ14774 488 aaPredicted RBP4.54□□□□□ -1.68
CSMD3-201ENST00000297405 CT45A1Q5HYN5 189 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 PIWIL3Q7Z3Z3 882 aaKnown RBP4.54□□□□□ -1.68
CSMD3-201ENST00000297405 CT45A3Q8NHU0 189 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 WDR34Q96EX3 536 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 C8orf37Q96NL8 207 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 TXNDC17Q9BRA2 123 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 NTPCRQ9BSD7 190 aaKnown RBP4.54□□□□□ -1.68
CSMD3-201ENST00000297405 STRA6Q9BX79 667 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 OR51I1Q9H343 314 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 AK3Q9UIJ7 227 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 CLEC4EQ9ULY5 219 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 HHLA2Q9UM44 414 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 A0A087WUU8 490 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 TMEM262E9PQX1 116 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 DVL2O14641 736 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 TCRBP04435 133 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 GABRR2P28476 465 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 OR10J1P30954 320 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 DAP3P51398 398 aaKnown RBP4.54□□□□□ -1.68
CSMD3-201ENST00000297405 RPE65Q16518 533 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 OR13C4Q8NGS5 318 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 OR13C8Q8NGS7 320 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 FAM213BQ8TBF2 198 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 RAET1EQ8TD07 263 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 SDSLQ96GA7 329 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 FEVQ99581 238 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 CDCA4Q9BXL8 241 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 CD244Q9BZW8 370 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 FABP4P15090 132 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 AADACP22760 399 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 LSSP48449 732 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 HSPB3Q12988 150 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 FAHD2BQ6P2I3 314 aaPredicted RBP4.54□□□□□ -1.68
CSMD3-201ENST00000297405 SLC24A5Q71RS6 500 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 MAMDC2Q7Z304 686 aaPredicted RBP4.54□□□□□ -1.68
CSMD3-201ENST00000297405 L3MBTL4Q8NA19 623 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 DYNC2LI1Q8TCX1 351 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 FAHD2AQ96GK7 314 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 TP53RKQ96S44 253 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 GPR21Q99679 349 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 EBF4Q9BQW3 602 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 GCM1Q9NP62 436 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 NDUFB11Q9NX14 153 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 OARD1Q9Y530 152 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 DMRT1Q9Y5R6 373 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 IDSP22304 550 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 GABRR1P24046 479 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 CSNK1A1P48729 337 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 MARCKSL1P49006 195 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 ZNF551Q7Z340 670 aaPredicted RBP4.54□□□□□ -1.68
CSMD3-201ENST00000297405 SLC46A3Q7Z3Q1 461 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 LINC00469Q8N7U9 141 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 OR51T1Q8NGJ9 327 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 GCDHQ92947 438 aaPredicted RBP4.54□□□□□ -1.68
CSMD3-201ENST00000297405 HERPUD2Q9BSE4 406 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 NDFIP1Q9BT67 221 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 SOX7Q9BT81 388 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 XYLT2Q9H1B5 865 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 SLC2A8Q9NY64 477 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 MGAMO43451 1857 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 PEAK1Q9H792 1746 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 PQLC2LA1A4F0 135 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 CD300LBA8K4G0 201 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 ST8SIA3O43173 380 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 ATP1B1P05026 303 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 FOLR1P15328 257 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 RPA2P15927 270 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 EMX1Q04741 257 aaPredicted RBP4.54□□□□□ -1.68
CSMD3-201ENST00000297405 VWA2Q5GFL6 755 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 PLPPR4Q7Z2D5 763 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 FRMD1Q8N878 549 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 ANKK1Q8NFD2 765 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 OR4F15Q8NGB8 312 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 LINC01599Q8WXQ3 324 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 FAM3CQ92520 227 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 NAA11Q9BSU3 229 aaPredicted RBP4.54□□□□□ -1.68
CSMD3-201ENST00000297405 MRIQ9BWK5 157 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 SLC35A3Q9Y2D2 325 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 SALL3Q9BXA9 1300 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 HSBP1O75506 76 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 MSX1P28360 303 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 CLCN3P51790 818 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 CST9LP1Q5W188 147 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 GJB7Q6PEY0 223 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 ANGPTL5Q86XS5 388 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 NANOS1Q8WY41 292 aaKnown RBP4.54□□□□□ -1.68
CSMD3-201ENST00000297405 UCK1Q9HA47 277 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 NRIP3Q9NQ35 241 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 PLEKHJ1Q9NW61 149 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 MIOXQ9UGB7 285 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms