RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 OR10A3P58181 314 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 UBE2MP61081 183 aaKnown RBP12.46□□□□□ -0.41
HPS3-201ENST00000296051 GXYLT1Q4G148 440 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 FAAP20Q6NZ36 180 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 LYPD8Q6UX82 237 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 TMEM184AQ6ZMB5 413 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 CALHM3Q86XJ0 350 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 OR56B4Q8NH76 319 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 OR1E3Q8WZA6 343 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 ORAI1Q96D31 301 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 OR7D2Q96RA2 312 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 PITX2Q99697 317 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 RBM24Q9BX46 236 aaKnown RBP12.46□□□□□ -0.41
HPS3-201ENST00000296051 ACTRT3Q9BYD9 372 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 PELI2Q9HAT8 420 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 TMEM9BQ9NQ34 198 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 SLC23A1Q9UHI7 598 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 RNF215Q9Y6U7 377 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 A0A087WUU8 490 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 F5H5P2 479 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 PEX14O75381 377 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 PSMB1P20618 241 aaKnown RBP12.46□□□□□ -0.41
HPS3-201ENST00000296051 LSSP48449 732 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 VASPP50552 380 aaPredicted RBP12.46□□□□□ -0.41
HPS3-201ENST00000296051 AKR1C2P52895 323 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 AKR1C1Q04828 323 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 CBFBQ13951 182 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 CRMP1Q14194 572 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 SSX1Q16384 188 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 TOR2AQ5JU69 321 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 HBMQ6B0K9 141 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 ZNF454Q8N9F8 522 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 SLC37A2Q8TED4 501 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 C15orf40Q8WUR7 153 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 ST8SIA2Q92186 375 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 OR5B2Q96R09 309 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 PINK1Q9BXM7 581 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 RXFP3Q9NSD7 469 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 FLVCR2Q9UPI3 526 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 ADAMTSL1Q8N6G6 1762 aa12.46□□□□□ -0.41
HPS3-201ENST00000296051 ZFAND5O76080 213 aa12.46□□□□□ -0.42
HPS3-201ENST00000296051 DGCR2P98153 550 aa12.46□□□□□ -0.42
HPS3-201ENST00000296051 TIAL1Q01085 375 aaKnown RBP eCLIP12.46□□□□□ -0.42
HPS3-201ENST00000296051 MEPCEQ7L2J0 689 aaKnown RBP12.46□□□□□ -0.42
HPS3-201ENST00000296051 ZNF584Q8IVC4 421 aa12.46□□□□□ -0.42
HPS3-201ENST00000296051 ABHD4Q8TB40 342 aa12.46□□□□□ -0.42
HPS3-201ENST00000296051 PATE1Q8WXA2 126 aa12.46□□□□□ -0.42
HPS3-201ENST00000296051 GAL3ST3Q96A11 431 aa12.46□□□□□ -0.42
HPS3-201ENST00000296051 OR14A2Q96R54 314 aa12.46□□□□□ -0.42
HPS3-201ENST00000296051 PDCD1LG2Q9BQ51 273 aa12.46□□□□□ -0.42
HPS3-201ENST00000296051 GSX2Q9BZM3 304 aa12.46□□□□□ -0.42
HPS3-201ENST00000296051 ZNF700Q9H0M5 742 aa12.46□□□□□ -0.42
HPS3-201ENST00000296051 MBNL1Q9NR56 388 aaKnown RBP12.46□□□□□ -0.42
HPS3-201ENST00000296051 A0A0A6YYJ9 748 aa12.46□□□□□ -0.42
HPS3-201ENST00000296051 TTLL8A6PVC2 850 aa12.46□□□□□ -0.42
HPS3-201ENST00000296051 HYAL3O43820 417 aaPredicted RBP12.46□□□□□ -0.42
HPS3-201ENST00000296051 CD63P08962 238 aa12.46□□□□□ -0.42
HPS3-201ENST00000296051 IL9P15248 144 aa12.46□□□□□ -0.42
HPS3-201ENST00000296051 CD46P15529 392 aa12.46□□□□□ -0.42
HPS3-201ENST00000296051 HTR4Q13639 388 aa12.46□□□□□ -0.42
HPS3-201ENST00000296051 SIGIRRQ6IA17 410 aa12.46□□□□□ -0.42
HPS3-201ENST00000296051 LCTLQ6UWM7 567 aa12.46□□□□□ -0.42
HPS3-201ENST00000296051 GTPBP8Q8N3Z3 284 aaPredicted RBP12.46□□□□□ -0.42
HPS3-201ENST00000296051 BBS1Q8NFJ9 593 aa12.46□□□□□ -0.42
HPS3-201ENST00000296051 FAM174AQ8TBP5 190 aa12.46□□□□□ -0.42
HPS3-201ENST00000296051 APH1BQ8WW43 257 aa12.46□□□□□ -0.42
HPS3-201ENST00000296051 RBPMSQ93062 196 aaKnown RBP12.46□□□□□ -0.42
HPS3-201ENST00000296051 C1GALT1Q9NS00 363 aa12.46□□□□□ -0.42
HPS3-201ENST00000296051 QPCTLQ9NXS2 382 aa12.46□□□□□ -0.42
HPS3-201ENST00000296051 KCNN3Q9UGI6 736 aa12.46□□□□□ -0.42
HPS3-201ENST00000296051 ATPIF1Q9UII2 106 aa12.46□□□□□ -0.42
HPS3-201ENST00000296051 KCND3Q9UK17 655 aa12.46□□□□□ -0.42
HPS3-201ENST00000296051 SRPX2O60687 465 aaPredicted RBP12.45□□□□□ -0.42
HPS3-201ENST00000296051 HCCSP53701 268 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 HSD11B2P80365 405 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 ARHGAP19Q14CB8 494 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 EXOSC7Q15024 291 aaKnown RBP12.45□□□□□ -0.42
HPS3-201ENST00000296051 KIAA0040Q15053 153 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 SSX6Q7RTT6 188 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 OR13C5Q8NGS8 318 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 ST6GAL2Q96JF0 529 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 TWSG1Q9GZX9 223 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 GLIPR2Q9H4G4 154 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 ASIC5Q9NY37 505 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 GLS2Q9UI32 602 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 TRABD2BA6NFA1 517 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 PRSS3P35030 304 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 MCCD1P59942 119 aaPredicted RBP12.45□□□□□ -0.42
HPS3-201ENST00000296051 MC2RQ01718 297 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 GK2Q14410 553 aaPredicted RBP12.45□□□□□ -0.42
HPS3-201ENST00000296051 PRAMEF20Q5VT98 475 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 ZMAT3Q9HA38 289 aaKnown RBP12.45□□□□□ -0.42
HPS3-201ENST00000296051 ATP13A2Q9NQ11 1180 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 NDUFB11Q9NX14 153 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 KIAA1217Q5T5P2 1943 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 CCDC88CQ9P219 2028 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 TRDV1A0A1B0GX56 115 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 YY2O15391 372 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 YKT6O15498 198 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 AK1P00568 194 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms