RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 C3orf49Q96BT1 292 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 MMABQ96EY8 250 aaPredicted RBP13.79□□□□□ -0.2
CCDC116-201ENST00000292779 LMF1Q96S06 567 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 ABCG5Q9H222 651 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 GALNT9Q9HCQ5 603 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 GNG8Q9UK08 70 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 COPS3Q9UNS2 423 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 NPFFR2Q9Y5X5 522 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 TRAV1-2A0A0B4J238 106 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 OR6C68A6NDL8 312 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 SELENOFO60613 162 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 PPM1BO75688 479 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 NSA2O95478 260 aaKnown RBP13.79□□□□□ -0.2
CCDC116-201ENST00000292779 IFNA16P05015 189 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 ATF1P18846 271 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 AHCYP23526 432 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 DIO1P49895 249 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 STARD6P59095 220 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 RPS11P62280 158 aaKnown RBP eCLIP13.79□□□□□ -0.2
CCDC116-201ENST00000292779 ERVK-25P63136 954 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 EFR3AQ14156 821 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 C6orf183Q5T699 404 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 PYHIN1Q6K0P9 492 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 ZNF615Q8N8J6 731 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 GATSQ8NAP1 163 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 OR6C4Q8NGE1 309 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 OR4D9Q8NGE8 314 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 OR14A16Q8NHC5 309 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 RASD2Q96D21 266 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 TCTN2Q96GX1 697 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 ACOXLQ9NUZ1 547 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 MCUBQ9NWR8 336 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 ZNF337Q9Y3M9 751 aa13.79□□□□□ -0.2
CCDC116-201ENST00000292779 TMEM184BQ9Y519 407 aaPredicted RBP13.79□□□□□ -0.2
CCDC116-201ENST00000292779 TRBV2A0A0J9YWF9 115 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 OR7A10O76100 309 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 PDGFBP01127 241 aaPredicted RBP13.78□□□□□ -0.2
CCDC116-201ENST00000292779 SNRPBP14678 240 aaKnown RBP13.78□□□□□ -0.2
CCDC116-201ENST00000292779 SPI1P17947 270 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 CAPZBP47756 277 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 SRP9P49458 86 aaKnown RBP13.78□□□□□ -0.2
CCDC116-201ENST00000292779 RRAS2P62070 204 aaPredicted RBP13.78□□□□□ -0.2
CCDC116-201ENST00000292779 LGALS3BPQ08380 585 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 PLA1AQ53H76 456 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 CEP78Q5JTW2 689 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.78□□□□□ -0.2
CCDC116-201ENST00000292779 TIGD3Q6B0B8 471 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 LYPD4Q6UWN0 246 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 LILRB4Q8NHJ6 448 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 OR14A2Q96R54 314 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 DDOQ99489 341 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 NRIP3Q9NQ35 241 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 NCDNQ9UBB6 729 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 PCDH15Q96QU1 1955 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 ZDBF2Q9HCK1 2354 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 BLACEA4D250 179 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 NOTOA8MTQ0 251 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 DCNP07585 359 aaKnown RBP13.78□□□□□ -0.2
CCDC116-201ENST00000292779 EPXP11678 715 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 EDNRAP25101 427 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 BTCP35070 178 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 PSMB10P40306 273 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 PPM1FP49593 454 aaPredicted RBP13.78□□□□□ -0.2
CCDC116-201ENST00000292779 KLHL26Q53HC5 615 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 YIF1BQ5BJH7 314 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 KRT74Q7RTS7 529 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 OR6K6Q8NGW6 343 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 HSPA12BQ96MM6 686 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 PDCD1LG2Q9BQ51 273 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.78□□□□□ -0.2
CCDC116-201ENST00000292779 WNT16Q9UBV4 365 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 CACNG2Q9Y698 323 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 TECTAO75443 2155 aa13.78□□□□□ -0.2
CCDC116-201ENST00000292779 TTC28Q96AY4 2481 aa13.77□□□□□ -0.2
CCDC116-201ENST00000292779 IGKV1D-42A0A075B6H8 117 aa13.77□□□□□ -0.21
CCDC116-201ENST00000292779 FLRT2O43155 660 aa13.77□□□□□ -0.21
CCDC116-201ENST00000292779 ZNF749O43361 778 aa13.77□□□□□ -0.21
CCDC116-201ENST00000292779 SERPINI2O75830 405 aa13.77□□□□□ -0.21
CCDC116-201ENST00000292779 ARL6IP5O75915 188 aa13.77□□□□□ -0.21
CCDC116-201ENST00000292779 CLPSP04118 112 aa13.77□□□□□ -0.21
CCDC116-201ENST00000292779 WNT1P04628 370 aa13.77□□□□□ -0.21
CCDC116-201ENST00000292779 UCHL1P09936 223 aa13.77□□□□□ -0.21
CCDC116-201ENST00000292779 RPS4XP62701 263 aaKnown RBP13.77□□□□□ -0.21
CCDC116-201ENST00000292779 FAPQ12884 760 aa13.77□□□□□ -0.21
CCDC116-201ENST00000292779 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.77□□□□□ -0.21
CCDC116-201ENST00000292779 RPL22L1Q6P5R6 122 aaKnown RBP13.77□□□□□ -0.21
CCDC116-201ENST00000292779 SYT13Q7L8C5 426 aa13.77□□□□□ -0.21
CCDC116-201ENST00000292779 OR51Q1Q8NH59 317 aa13.77□□□□□ -0.21
CCDC116-201ENST00000292779 MOSPD2Q8NHP6 518 aa13.77□□□□□ -0.21
CCDC116-201ENST00000292779 ADAMTS18Q8TE60 1221 aa13.77□□□□□ -0.21
CCDC116-201ENST00000292779 ZNF578Q96N58 590 aaPredicted RBP13.77□□□□□ -0.21
CCDC116-201ENST00000292779 NMNAT2Q9BZQ4 307 aa13.77□□□□□ -0.21
CCDC116-201ENST00000292779 SLA2Q9H6Q3 261 aa13.77□□□□□ -0.21
CCDC116-201ENST00000292779 BRD7Q9NPI1 651 aa13.77□□□□□ -0.21
CCDC116-201ENST00000292779 ING3Q9NXR8 418 aa13.77□□□□□ -0.21
CCDC116-201ENST00000292779 CEP192Q8TEP8 1941 aa13.77□□□□□ -0.21
CCDC116-201ENST00000292779 TP53BP1Q12888 1972 aaPredicted RBP13.77□□□□□ -0.21
CCDC116-201ENST00000292779 C4orf47A7E2U8 309 aa13.76□□□□□ -0.21
CCDC116-201ENST00000292779 CHURC1-FNTBB4DL54 471 aa13.76□□□□□ -0.21
CCDC116-201ENST00000292779 ARPC3O15145 178 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms