RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 SLC38A1Q9H2H9 487 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 KLHL28Q9NXS3 571 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 CNIH4Q9P003 139 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 SLC13A4Q9UKG4 626 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 WASF3Q9UPY6 502 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 PCDHGA9Q9Y5G4 932 aaKnown RBP9.5□□□□□ -0.89
UPF3B-201ENST00000276201 PCYT1BQ9Y5K3 369 aaPredicted RBP9.5□□□□□ -0.89
UPF3B-201ENST00000276201 KLF2Q9Y5W3 355 aaPredicted RBP9.5□□□□□ -0.89
UPF3B-201ENST00000276201 DAPL1A0PJW8 107 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 DVL2O14641 736 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 GALR3O60755 368 aaPredicted RBP9.5□□□□□ -0.89
UPF3B-201ENST00000276201 EPXP11678 715 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 SELENOPP49908 381 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 CCR8P51685 355 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 POU4F2Q12837 409 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 FOXC1Q12948 553 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 CEBPEQ15744 281 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 CCDC157Q569K6 752 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 TCTE1Q5JU00 501 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 C6orf132Q5T0Z8 1188 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 GLDNQ6ZMI3 551 aaPredicted RBP9.5□□□□□ -0.89
UPF3B-201ENST00000276201 NRROSQ86YC3 692 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 DCUN1D3Q8IWE4 304 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 CFAP206Q8IYR0 622 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 ANKRD53Q8N9V6 530 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 OR5D16Q8NGK9 328 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 OR6M1Q8NGM8 313 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 OR2L2Q8NH16 312 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 SGTBQ96EQ0 304 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 MS4A3Q96HJ5 214 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 SFXN2Q96NB2 322 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 SPRTNQ9H040 489 aaPredicted RBP9.5□□□□□ -0.89
UPF3B-201ENST00000276201 OR52A5Q9H2C5 316 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 EVA1AQ9H8M9 152 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 TAS2R5Q9NYW4 299 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 HCN3Q9P1Z3 774 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 IL20RAQ9UHF4 553 aa9.5□□□□□ -0.89
UPF3B-201ENST00000276201 ZNF223Q9UK11 482 aaPredicted RBP9.5□□□□□ -0.89
UPF3B-201ENST00000276201 BHLHE40O14503 412 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 REM1O75628 298 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 ARL6IP5O75915 188 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 AQP8O94778 261 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 HPXP02790 462 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 NMBP08949 121 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 CD3GP09693 182 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 UCHL1P09936 223 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 ACP1P24666 158 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 SSTR2P30874 369 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 VSX2P58304 361 aaPredicted RBP9.49□□□□□ -0.89
UPF3B-201ENST00000276201 TSPAN5P62079 268 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 OR4C11Q6IEV9 310 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 HEPHL1Q6MZM0 1159 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 IL20RBQ6UXL0 311 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 UNQ9370/PRO34162Q6UXP9 181 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 GDF7Q7Z4P5 450 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 GKN2Q86XP6 184 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 SLC35F3Q8IY50 421 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 TMEM99Q8N816 258 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 TTLQ8NG68 377 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 OR11G2Q8NGC1 345 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 OR51G2Q8NGK0 314 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 GPBAR1Q8TDU6 330 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 C15orf40Q8WUR7 153 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 C12orf66Q96MD2 445 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 LINC00052Q96N35 136 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 LRFN5Q96NI6 719 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 OR2M4Q96R27 311 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 METTL17Q9H7H0 456 aaPredicted RBP9.49□□□□□ -0.89
UPF3B-201ENST00000276201 TEX10Q9NXF1 929 aaPredicted RBP9.49□□□□□ -0.89
UPF3B-201ENST00000276201 BAIAP2Q9UQB8 552 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 CHST2Q9Y4C5 530 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 PLEKHM1Q9Y4G2 1056 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 CEP295Q9C0D2 2601 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 UNC119BA6NIH7 251 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 MCRIP1C9JLW8 97 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 GABARAPH6UMI1 98 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 EMC8O43402 210 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 VEGFDO43915 354 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 ANKRD34CP0C6C1 535 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 SLC2A5P22732 501 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 GDNFP39905 211 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 CCR6P51684 374 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 OR10A3P58181 314 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 FOXK2Q01167 660 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 SLC25A35Q3KQZ1 300 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 ACSM3Q53FZ2 586 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 CLEC12AQ5QGZ9 265 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 MRM1Q6IN84 353 aaKnown RBP9.49□□□□□ -0.89
UPF3B-201ENST00000276201 B3GLCTQ6Y288 498 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 DNM1P46Q6ZS02 220 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 TAF8Q7Z7C8 310 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 SFTPA2Q8IWL1 248 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 SYS1Q8N2H4 156 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 BMPERQ8N8U9 685 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 OR5T2Q8NGG2 359 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 ELP4Q96EB1 424 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 SLC41A3Q96GZ6 507 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 SARGQ9BW04 601 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 OR2AG1Q9H205 316 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 SLC6A15Q9H2J7 730 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms