RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 REM1O75628 298 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 HEXAP06865 529 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 MRPL3P09001 348 aaKnown RBP8.09□□□□□ -1.11
VAPB-201ENST00000265619 FOLR2P14207 255 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 GNSP15586 552 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 HOXD9P28356 352 aaPredicted RBP8.09□□□□□ -1.11
VAPB-201ENST00000265619 PTGER1P34995 402 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 PPM1AP35813 382 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 SPAM1P38567 509 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 DLX5P56178 289 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 SPCS3P61009 180 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 NAE1Q13564 534 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 IL10RAQ13651 578 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 ZNF783Q6ZMS7 281 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 OR51S1Q8NGJ8 323 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 TMEM19Q96HH6 336 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 GFI1Q99684 422 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 ZNF282Q9UDV7 671 aaPredicted RBP8.09□□□□□ -1.11
VAPB-201ENST00000265619 PIAS3Q9Y6X2 628 aa8.09□□□□□ -1.11
VAPB-201ENST00000265619 RNF222A6NCQ9 220 aa8.09□□□□□ -1.12
VAPB-201ENST00000265619 ANKRD66B4E2M5 251 aa8.09□□□□□ -1.12
VAPB-201ENST00000265619 CCSO14618 274 aa8.09□□□□□ -1.12
VAPB-201ENST00000265619 IGHA1P01876 353 aa8.09□□□□□ -1.12
VAPB-201ENST00000265619 RLN1P04808 185 aa8.09□□□□□ -1.12
VAPB-201ENST00000265619 SNRPCP09234 159 aaKnown RBP8.09□□□□□ -1.12
VAPB-201ENST00000265619 UBBP0CG47 229 aa8.09□□□□□ -1.12
VAPB-201ENST00000265619 UBCP0CG48 685 aaKnown RBP8.09□□□□□ -1.12
VAPB-201ENST00000265619 TYRP14679 529 aa8.09□□□□□ -1.12
VAPB-201ENST00000265619 VAMP1P23763 118 aa8.09□□□□□ -1.12
VAPB-201ENST00000265619 CCR2P41597 374 aa8.09□□□□□ -1.12
VAPB-201ENST00000265619 STARD6P59095 220 aa8.09□□□□□ -1.12
VAPB-201ENST00000265619 RPS27AP62979 156 aaKnown RBP8.09□□□□□ -1.12
VAPB-201ENST00000265619 UBA52P62987 128 aaKnown RBP8.09□□□□□ -1.12
VAPB-201ENST00000265619 SHC2P98077 582 aa8.09□□□□□ -1.12
VAPB-201ENST00000265619 ACY1Q03154 408 aa8.09□□□□□ -1.12
VAPB-201ENST00000265619 TMEM240Q5SV17 173 aa8.09□□□□□ -1.12
VAPB-201ENST00000265619 ADGRF1Q5T601 910 aa8.09□□□□□ -1.12
VAPB-201ENST00000265619 TRIM40Q6P9F5 258 aa8.09□□□□□ -1.12
VAPB-201ENST00000265619 TSSK4Q6SA08 328 aa8.09□□□□□ -1.12
VAPB-201ENST00000265619 IKBIPQ70UQ0 350 aa8.09□□□□□ -1.12
VAPB-201ENST00000265619 OR5J2Q8NH18 312 aa8.09□□□□□ -1.12
VAPB-201ENST00000265619 OR5W2Q8NH69 310 aa8.09□□□□□ -1.12
VAPB-201ENST00000265619 ZC3H10Q96K80 434 aaKnown RBP8.09□□□□□ -1.12
VAPB-201ENST00000265619 F2RL3Q96RI0 385 aa8.09□□□□□ -1.12
VAPB-201ENST00000265619 TEAD3Q99594 435 aa8.09□□□□□ -1.12
VAPB-201ENST00000265619 OR51I1Q9H343 314 aa8.09□□□□□ -1.12
VAPB-201ENST00000265619 CACYBPQ9HB71 228 aaKnown RBP8.09□□□□□ -1.12
VAPB-201ENST00000265619 LHX9Q9NQ69 397 aa8.09□□□□□ -1.12
VAPB-201ENST00000265619 POT1Q9NUX5 634 aa8.09□□□□□ -1.12
VAPB-201ENST00000265619 UQCC1Q9NVA1 299 aa8.09□□□□□ -1.12
VAPB-201ENST00000265619 A0A1W2PPH5 198 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 MEIS3P1A6NDR6 274 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 SULT2B1O00204 365 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 RHOP08100 348 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 UQCRC2P22695 453 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 TDGQ13569 410 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 FAM199XQ6PEV8 388 aaPredicted RBP8.08□□□□□ -1.12
VAPB-201ENST00000265619 DUSP19Q8WTR2 217 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 FAM46AQ96IP4 442 aaKnown RBP8.08□□□□□ -1.12
VAPB-201ENST00000265619 NECAB3Q96P71 396 aaPredicted RBP8.08□□□□□ -1.12
VAPB-201ENST00000265619 INSM2Q96T92 566 aaPredicted RBP8.08□□□□□ -1.12
VAPB-201ENST00000265619 ALG8Q9BVK2 526 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 CXorf36Q9H7Y0 433 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 CRLF2Q9HC73 371 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 HINT3Q9NQE9 182 aaKnown RBP8.08□□□□□ -1.12
VAPB-201ENST00000265619 POLE3Q9NRF9 147 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 NTNG1Q9Y2I2 539 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 CBY1Q9Y3M2 126 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 COL4A6Q14031 1691 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 J3QRE1 110 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 INSIG1O15503 277 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 NDUFB6O95139 128 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 APBB3O95704 486 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 ANXA5P08758 320 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 RCC1P18754 421 aaPredicted RBP8.08□□□□□ -1.12
VAPB-201ENST00000265619 FUT1P19526 365 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 CPT2P23786 658 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 G0S2P27469 103 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 HCCSP53701 268 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 SEC13P55735 322 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 ACSM1Q08AH1 577 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 ACSM3Q53FZ2 586 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 C11orf88Q6PI97 169 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 SKA3Q8IX90 412 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 POMGNT2Q8NAT1 580 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 GPR148Q8TDV2 347 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 CYB5D2Q8WUJ1 264 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 SEC22AQ96IW7 307 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 PGLYRP3Q96LB9 341 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 SSX3Q99909 188 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 EGLN1Q9GZT9 426 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 SLITRK2Q9H156 845 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 TMEM138Q9NPI0 162 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 ATG4BQ9Y4P1 393 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 NLRC5Q86WI3 1866 aa8.08□□□□□ -1.12
VAPB-201ENST00000265619 MGAT4DA6NG13 374 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 RHPN2P1A8MT19 583 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 NPIPB8E9PQR5 432 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 RNASET2O00584 256 aaKnown RBP8.07□□□□□ -1.12
VAPB-201ENST00000265619 PPP1R3DO95685 299 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms