RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 LINC01565O15544 149 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 PLRG1O43660 514 aaKnown RBP12.95□□□□□ -0.34
CDH3-201ENST00000264012 ETHE1O95571 254 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 HOXC8P31273 242 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 APLNRP35414 380 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 GPLD1P80108 840 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 TBC1D15Q8TC07 691 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 LINC00615Q96LM1 132 aaPredicted RBP12.95□□□□□ -0.34
CDH3-201ENST00000264012 NECAB3Q96P71 396 aaPredicted RBP12.95□□□□□ -0.34
CDH3-201ENST00000264012 NRSN2Q9GZP1 204 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 DNTTIP1Q9H147 329 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 NUP50Q9UKX7 468 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 SNX11Q9Y5W9 270 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 SMCHD1A6NHR9 2005 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 M0R036 132 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 ZNF593O00488 134 aaPredicted RBP12.95□□□□□ -0.34
CDH3-201ENST00000264012 YKT6O15498 198 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 LGI1O95970 557 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 TEAD1P28347 426 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 SIRPAP78324 504 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 ZMYND11Q15326 602 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 CFAP77Q6ZQR2 320 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 CMIPQ8IY22 773 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 BRIX1Q8TDN6 353 aaKnown RBP12.95□□□□□ -0.34
CDH3-201ENST00000264012 CENPOQ9BU64 300 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 ENKD1Q9H0I2 346 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 FAM86C1Q9NVL1 165 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 ZNF175Q9Y473 711 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 NUBP2Q9Y5Y2 271 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 CXorf51AA0A1B0GTR3 108 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 ACOD1A6NK06 481 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 CEACAM5P06731 702 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 MAKP20794 623 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 HTR1FP30939 366 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 METTL11BQ5VVY1 283 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 LRRC69Q6ZNQ3 347 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 CTRCQ99895 268 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 PPIL3Q9H2H8 161 aaKnown RBP12.95□□□□□ -0.34
CDH3-201ENST00000264012 ACER3Q9NUN7 267 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 KCNIP1Q9NZI2 227 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 UQCRC1P31930 480 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 SSR4P51571 173 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 EPHA4P54764 986 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 ARSJQ5FYB0 599 aaPredicted RBP12.95□□□□□ -0.34
CDH3-201ENST00000264012 LINC00299Q6ZSB3 139 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 ZNF709Q8N972 641 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 GHSRQ92847 366 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 SYT3Q9BQG1 590 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 NXF5Q9H1B4 397 aaKnown RBP12.95□□□□□ -0.34
CDH3-201ENST00000264012 SEMA4GQ9NTN9 838 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 PLEKHJ1Q9NW61 149 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 PCDHGA6Q9Y5G7 932 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 COL24A1Q17RW2 1714 aa12.95□□□□□ -0.34
CDH3-201ENST00000264012 LOC105369274A0A096LPK9 316 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 LOC102725191A0A1B0GVB3 256 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 MEIS3P1A6NDR6 274 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 NCR1O76036 304 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 MECP2P51608 486 aaKnown RBP12.94□□□□□ -0.34
CDH3-201ENST00000264012 CCR5P51681 352 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 RPL19P84098 196 aaKnown RBP12.94□□□□□ -0.34
CDH3-201ENST00000264012 SLC22A6Q4U2R8 563 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 C3P1Q6ZMU1 363 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 DPY19L4Q7Z388 723 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 PXKQ7Z7A4 578 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 OR4N4Q8N0Y3 316 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 OR1J4Q8NGS1 313 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 BAHD1Q8TBE0 780 aaPredicted RBP12.94□□□□□ -0.34
CDH3-201ENST00000264012 TOMM40LQ969M1 308 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 VN1R3Q9BXE9 311 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 WASH6PQ9NQA3 447 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 WBP1LQ9NX94 342 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 FAM230AA0A1W2PPH8 454 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 ARPC1BO15143 372 aaKnown RBP12.94□□□□□ -0.34
CDH3-201ENST00000264012 FGF17O60258 216 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 PIP5K1CO60331 668 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 OR7A10O76100 309 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 KNG1P01042 644 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 CHRM4P08173 479 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 CD14P08571 375 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 NID1P14543 1247 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 ST6GAL1P15907 406 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 ISL1P61371 349 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 SNRPD2P62316 118 aaKnown RBP12.94□□□□□ -0.34
CDH3-201ENST00000264012 TGFBR3Q03167 851 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 MELKQ14680 651 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 DPY19L2P2Q6ZN68 376 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 NKAIN4Q8IVV8 208 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 FOXRED1Q96CU9 486 aaPredicted RBP12.94□□□□□ -0.34
CDH3-201ENST00000264012 SDF2Q99470 211 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 TAS2R3Q9NYW6 316 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 EMC3Q9P0I2 261 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 RHBDD3Q9Y3P4 386 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 CDHR4A6H8M9 788 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 NUDT21O43809 227 aaKnown RBP12.94□□□□□ -0.34
CDH3-201ENST00000264012 ZNF566Q969W8 418 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 SLCO4A1Q96BD0 722 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 ZNF775Q96BV0 537 aaPredicted RBP12.94□□□□□ -0.34
CDH3-201ENST00000264012 SLC35A4Q96G79 324 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 SCN1AP35498 2009 aa12.94□□□□□ -0.34
CDH3-201ENST00000264012 LOC102723532A0A0G2JNH3 316 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms